RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 ZP4Q12836 540 aa18.2■□□□□ 0.5
CHFR-217ENST00000540537 CAMK2DQ13557 499 aa18.2■□□□□ 0.5
CHFR-217ENST00000540537 REP15Q6BDI9 236 aa18.2■□□□□ 0.5
CHFR-217ENST00000540537 MDP1Q86V88 176 aa18.2■□□□□ 0.5
CHFR-217ENST00000540537 MYPOPQ86VE0 399 aaPredicted RBP18.2■□□□□ 0.5
CHFR-217ENST00000540537 FAM168AQ92567 244 aa18.2■□□□□ 0.5
CHFR-217ENST00000540537 PROX1Q92786 737 aa18.2■□□□□ 0.5
CHFR-217ENST00000540537 ULBP2Q9BZM5 246 aa18.2■□□□□ 0.5
CHFR-217ENST00000540537 ZNF229Q9UJW7 825 aa18.2■□□□□ 0.5
CHFR-217ENST00000540537 IGHV2OR16-5A0A0B4J2B6 119 aa18.19■□□□□ 0.5
CHFR-217ENST00000540537 C11orf98E9PRG8 122 aa18.19■□□□□ 0.5
CHFR-217ENST00000540537 CRLF1O75462 422 aa18.19■□□□□ 0.5
CHFR-217ENST00000540537 SERPINI2O75830 405 aa18.19■□□□□ 0.5
CHFR-217ENST00000540537 OR6A2O95222 327 aa18.19■□□□□ 0.5
CHFR-217ENST00000540537 CH25HO95992 272 aa18.19■□□□□ 0.5
CHFR-217ENST00000540537 OR4A8P0C604 315 aa18.19■□□□□ 0.5
CHFR-217ENST00000540537 CAPZA2P47755 286 aa18.19■□□□□ 0.5
CHFR-217ENST00000540537 HGFACQ04756 655 aa18.19■□□□□ 0.5
CHFR-217ENST00000540537 LOXL1Q08397 574 aaPredicted RBP18.19■□□□□ 0.5
CHFR-217ENST00000540537 NPRL3Q12980 569 aa18.19■□□□□ 0.5
CHFR-217ENST00000540537 EFNB3Q15768 340 aa18.19■□□□□ 0.5
CHFR-217ENST00000540537 ADIPOQQ15848 244 aa18.19■□□□□ 0.5
CHFR-217ENST00000540537 ERICH5Q6P6B1 374 aa18.19■□□□□ 0.5
CHFR-217ENST00000540537 WDFY1Q8IWB7 410 aa18.19■□□□□ 0.5
CHFR-217ENST00000540537 IL17RDQ8NFM7 739 aa18.19■□□□□ 0.5
CHFR-217ENST00000540537 OR6N1Q8NGY5 312 aa18.19■□□□□ 0.5
CHFR-217ENST00000540537 C10orf105Q8TEF2 133 aa18.19■□□□□ 0.5
CHFR-217ENST00000540537 ZNF442Q9H7R0 627 aa18.19■□□□□ 0.5
CHFR-217ENST00000540537 NANSQ9NR45 359 aa18.19■□□□□ 0.5
CHFR-217ENST00000540537 B3GNT2Q9NY97 397 aa18.19■□□□□ 0.5
CHFR-217ENST00000540537 BAG5Q9UL15 447 aa18.19■□□□□ 0.5
CHFR-217ENST00000540537 POFUT2Q9Y2G5 429 aa18.19■□□□□ 0.5
CHFR-217ENST00000540537 FKBP7Q9Y680 259 aa18.19■□□□□ 0.5
CHFR-217ENST00000540537 YLPM1P49750 1951 aaKnown RBP18.19■□□□□ 0.5
CHFR-217ENST00000540537 CSNK1A1P48729 337 aa18.18■□□□□ 0.5
CHFR-217ENST00000540537 BIDP55957 195 aa18.18■□□□□ 0.5
CHFR-217ENST00000540537 VHLLQ6RSH7 139 aa18.18■□□□□ 0.5
CHFR-217ENST00000540537 ZNF813Q6ZN06 617 aa18.18■□□□□ 0.5
CHFR-217ENST00000540537 PCYOX1LQ8NBM8 494 aa18.18■□□□□ 0.5
CHFR-217ENST00000540537 OR6X1Q8NH79 312 aa18.18■□□□□ 0.5
CHFR-217ENST00000540537 SORCS2Q96PQ0 1159 aa18.18■□□□□ 0.5
CHFR-217ENST00000540537 FOXB1Q99853 325 aa18.18■□□□□ 0.5
CHFR-217ENST00000540537 PRSS27Q9BQR3 290 aa18.18■□□□□ 0.5
CHFR-217ENST00000540537 POLR2J2Q9GZM3 115 aaKnown RBP18.18■□□□□ 0.5
CHFR-217ENST00000540537 POLR2J3Q9H1A7 115 aaKnown RBP18.18■□□□□ 0.5
CHFR-217ENST00000540537 PLK3Q9H4B4 646 aa18.18■□□□□ 0.5
CHFR-217ENST00000540537 ZNF446Q9NWS9 450 aa18.18■□□□□ 0.5
CHFR-217ENST00000540537 GID8Q9NWU2 228 aa18.18■□□□□ 0.5
CHFR-217ENST00000540537 TAS2R5Q9NYW4 299 aa18.18■□□□□ 0.5
CHFR-217ENST00000540537 FBXO9Q9UK97 447 aaPredicted RBP18.18■□□□□ 0.5
CHFR-217ENST00000540537 VSTM5A8MXK1 200 aa18.17■□□□□ 0.5
CHFR-217ENST00000540537 KPNA4O00629 521 aaPredicted RBP18.17■□□□□ 0.5
CHFR-217ENST00000540537 IFNGR1P15260 489 aa18.17■□□□□ 0.5
CHFR-217ENST00000540537 PPOXP50336 477 aa18.17■□□□□ 0.5
CHFR-217ENST00000540537 SLC35D2Q76EJ3 337 aa18.17■□□□□ 0.5
CHFR-217ENST00000540537 SLC46A3Q7Z3Q1 461 aa18.17■□□□□ 0.5
CHFR-217ENST00000540537 CARM1Q86X55 608 aa18.17■□□□□ 0.5
CHFR-217ENST00000540537 NANOS1Q8WY41 292 aaKnown RBP18.17■□□□□ 0.5
CHFR-217ENST00000540537 TMEM54Q969K7 222 aa18.17■□□□□ 0.5
CHFR-217ENST00000540537 ZNF583Q96ND8 569 aa18.17■□□□□ 0.5
CHFR-217ENST00000540537 TNFRSF13CQ96RJ3 184 aa18.17■□□□□ 0.5
CHFR-217ENST00000540537 DENND2DQ9H6A0 471 aaPredicted RBP18.17■□□□□ 0.5
CHFR-217ENST00000540537 CCDC134Q9H6E4 229 aa18.17■□□□□ 0.5
CHFR-217ENST00000540537 SH3GLB1Q9Y371 365 aa18.17■□□□□ 0.5
CHFR-217ENST00000540537 FAM220BPB1ANY3 271 aa18.16■□□□□ 0.5
CHFR-217ENST00000540537 GPRIN2O60269 458 aa18.16■□□□□ 0.5
CHFR-217ENST00000540537 LY6HO94772 140 aa18.16■□□□□ 0.5
CHFR-217ENST00000540537 IFNA14P01570 189 aa18.16■□□□□ 0.5
CHFR-217ENST00000540537 HLA-HP01893 362 aa18.16■□□□□ 0.5
CHFR-217ENST00000540537 HIST1H2ABP04908 130 aa18.16■□□□□ 0.5
CHFR-217ENST00000540537 ASAH2BP0C7U1 165 aa18.16■□□□□ 0.5
CHFR-217ENST00000540537 CD79AP11912 226 aa18.16■□□□□ 0.5
CHFR-217ENST00000540537 B4GALT1P15291 398 aa18.16■□□□□ 0.5
CHFR-217ENST00000540537 PDLIM4P50479 330 aa18.16■□□□□ 0.5
CHFR-217ENST00000540537 SF3A3Q12874 501 aaKnown RBP eCLIP18.16■□□□□ 0.5
CHFR-217ENST00000540537 GSG1Q2KHT4 349 aa18.16■□□□□ 0.5
CHFR-217ENST00000540537 TMEM249Q2WGJ8 235 aa18.16■□□□□ 0.5
CHFR-217ENST00000540537 HIST3H2AQ7L7L0 130 aa18.16■□□□□ 0.5
CHFR-217ENST00000540537 HIST1H2ACQ93077 130 aa18.16■□□□□ 0.5
CHFR-217ENST00000540537 MYOZ1Q9NP98 299 aaPredicted RBP18.16■□□□□ 0.5
CHFR-217ENST00000540537 YAE1D1Q9NRH1 226 aa18.16■□□□□ 0.5
CHFR-217ENST00000540537 CAPN7Q9Y6W3 813 aa18.16■□□□□ 0.5
CHFR-217ENST00000540537 DNHD1Q96M86 4753 aa18.16■□□□□ 0.5
CHFR-217ENST00000540537 LOC100653049A0A140TA62 436 aa18.15■□□□□ 0.5
CHFR-217ENST00000540537 SLC22A2O15244 555 aa18.15■□□□□ 0.5
CHFR-217ENST00000540537 RNF13O43567 381 aa18.15■□□□□ 0.5
CHFR-217ENST00000540537 KRT34O76011 436 aa18.15■□□□□ 0.5
CHFR-217ENST00000540537 OR5F1O95221 314 aa18.15■□□□□ 0.5
CHFR-217ENST00000540537 IGF2P01344 180 aa18.15■□□□□ 0.5
CHFR-217ENST00000540537 UMPSP11172 480 aa18.15■□□□□ 0.5
CHFR-217ENST00000540537 NPR2P20594 1047 aa18.15■□□□□ 0.5
CHFR-217ENST00000540537 THBS4P35443 961 aa18.15■□□□□ 0.5
CHFR-217ENST00000540537 RBM34P42696 430 aaKnown RBP18.15■□□□□ 0.5
CHFR-217ENST00000540537 TAS2R41P59536 307 aa18.15■□□□□ 0.5
CHFR-217ENST00000540537 VLDLRP98155 873 aa18.15■□□□□ 0.5
CHFR-217ENST00000540537 GUCY1A3Q02108 690 aa18.15■□□□□ 0.5
CHFR-217ENST00000540537 NANOGNBQ7Z5D8 188 aa18.15■□□□□ 0.5
CHFR-217ENST00000540537 LRRC17Q8N6Y2 441 aa18.15■□□□□ 0.5
CHFR-217ENST00000540537 C10orf82Q8WW14 230 aa18.15■□□□□ 0.5
CHFR-217ENST00000540537 ZNF75AQ96N20 296 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms