RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 CDKN2AP42771 156 aaKnown RBP12.07□□□□□ -0.48
UBE3B-209ENST00000539584 FGL1Q08830 312 aa12.07□□□□□ -0.48
UBE3B-209ENST00000539584 EIF2B5Q13144 721 aaKnown RBP12.07□□□□□ -0.48
UBE3B-209ENST00000539584 ZNF74Q16587 644 aa12.07□□□□□ -0.48
UBE3B-209ENST00000539584 ELOA3BQ3SY89 546 aa12.07□□□□□ -0.48
UBE3B-209ENST00000539584 ALG10Q5BKT4 473 aa12.07□□□□□ -0.48
UBE3B-209ENST00000539584 OOSP2Q86WS3 158 aa12.07□□□□□ -0.48
UBE3B-209ENST00000539584 LRRC75AQ8NAA5 344 aa12.07□□□□□ -0.48
UBE3B-209ENST00000539584 ELOA3Q8NG57 546 aa12.07□□□□□ -0.48
UBE3B-209ENST00000539584 OR2G2Q8NGZ5 317 aa12.07□□□□□ -0.48
UBE3B-209ENST00000539584 DOK4Q8TEW6 326 aa12.07□□□□□ -0.48
UBE3B-209ENST00000539584 MCHR2Q969V1 340 aa12.07□□□□□ -0.48
UBE3B-209ENST00000539584 SLC25A21Q9BQT8 299 aaPredicted RBP12.07□□□□□ -0.48
UBE3B-209ENST00000539584 TSPAN10Q9H1Z9 355 aaPredicted RBP12.07□□□□□ -0.48
UBE3B-209ENST00000539584 SLC25A32Q9H2D1 315 aa12.07□□□□□ -0.48
UBE3B-209ENST00000539584 SLCO5A1Q9H2Y9 848 aa12.07□□□□□ -0.48
UBE3B-209ENST00000539584 LDAHQ9H6V9 325 aa12.07□□□□□ -0.48
UBE3B-209ENST00000539584 MYOZ1Q9NP98 299 aaPredicted RBP12.07□□□□□ -0.48
UBE3B-209ENST00000539584 IDSB3KWA1 339 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 PMS2P2O95744 297 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 GALNSP34059 522 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 UBXN2BQ14CS0 331 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 CLVS2Q5SYC1 327 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 TMEM81Q6P7N7 255 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 ARSKQ6UWY0 536 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 TFAP2EQ6VUC0 442 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 TMEFF1Q8IYR6 380 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 OR5M9Q8NGP3 310 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 ORAI1Q96D31 301 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 Q96M85 177 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 DCBLD2Q96PD2 775 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 ARL6Q9H0F7 186 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 C1orf198Q9H425 327 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 CCDC86Q9H6F5 360 aaKnown RBP12.06□□□□□ -0.48
UBE3B-209ENST00000539584 C12orf4Q9NQ89 552 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 ZC4H2Q9NQZ6 224 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 SCN3AQ9NY46 2000 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 KIR2DS5A0A0G2JLQ3 304 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 A0A0G2JNG1 304 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 A0A1B0GVT2 93 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 TRIM77I1YAP6 450 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 KIR2DS3K7RE56 304 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 CLDN4O14493 209 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 SCAMP1O15126 338 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 ARPC5O15511 151 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 FOXS1O43638 330 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 SRPX2O60687 465 aaPredicted RBP12.06□□□□□ -0.48
UBE3B-209ENST00000539584 CTAG2O75638 210 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 RENP00797 406 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 ASAH2BP0C7U1 165 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 OR8G3PP0DMU2 310 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 RNH1P13489 461 aaKnown RBP12.06□□□□□ -0.48
UBE3B-209ENST00000539584 ALOX5APP20292 161 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 PRSS3P35030 304 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 KIR2DS5Q14953 304 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 TUSC1Q2TAM9 212 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 KLHL26Q53HC5 615 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 LPCAT3Q6P1A2 487 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 TSSK4Q6SA08 328 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 RD3Q7Z3Z2 195 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 ATG4DQ86TL0 474 aaPredicted RBP12.06□□□□□ -0.48
UBE3B-209ENST00000539584 ZNF676Q8N7Q3 588 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.06□□□□□ -0.48
UBE3B-209ENST00000539584 BVESQ8NE79 360 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 OR4N2Q8NGD1 307 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 OR4C16Q8NGL9 310 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 OR6M1Q8NGM8 313 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 ZPLD1Q8TCW7 415 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 PCNPQ8WW12 178 aaKnown RBP12.06□□□□□ -0.48
UBE3B-209ENST00000539584 ASB17Q8WXJ9 295 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 TMEM106AQ96A25 262 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 LINC00052Q96N35 136 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 PELOQ9BRX2 385 aaKnown RBP12.06□□□□□ -0.48
UBE3B-209ENST00000539584 POTEKPQ9BYX7 375 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 CDCP1Q9H5V8 836 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 GRHPRQ9UBQ7 328 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 PRODH2Q9UF12 536 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 ERVK-19Q9WJR5 959 aa12.06□□□□□ -0.48
UBE3B-209ENST00000539584 IGKV1D-42A0A075B6H8 117 aa12.05□□□□□ -0.48
UBE3B-209ENST00000539584 A0A0A6YYH2 397 aa12.05□□□□□ -0.48
UBE3B-209ENST00000539584 A6NJ64 397 aa12.05□□□□□ -0.48
UBE3B-209ENST00000539584 RFPL4AA6NLU0 287 aa12.05□□□□□ -0.48
UBE3B-209ENST00000539584 PRR32B1ATL7 298 aa12.05□□□□□ -0.48
UBE3B-209ENST00000539584 RFPL4AL1F8VTS6 287 aa12.05□□□□□ -0.48
UBE3B-209ENST00000539584 BLOC1S5-TXNDC5H3BN57 136 aa12.05□□□□□ -0.48
UBE3B-209ENST00000539584 H3BUI4 141 aa12.05□□□□□ -0.48
UBE3B-209ENST00000539584 K7EQS6 105 aa12.05□□□□□ -0.48
UBE3B-209ENST00000539584 TSPAN9O75954 239 aa12.05□□□□□ -0.48
UBE3B-209ENST00000539584 RPP14O95059 124 aaKnown RBP12.05□□□□□ -0.48
UBE3B-209ENST00000539584 RASGRP1O95267 797 aa12.05□□□□□ -0.48
UBE3B-209ENST00000539584 CT45A8P0DMV1 189 aa12.05□□□□□ -0.48
UBE3B-209ENST00000539584 CT45A9P0DMV2 189 aa12.05□□□□□ -0.48
UBE3B-209ENST00000539584 VSIG10L2P0DP72 767 aa12.05□□□□□ -0.48
UBE3B-209ENST00000539584 ATF4P18848 351 aaPredicted RBP12.05□□□□□ -0.48
UBE3B-209ENST00000539584 HNRNPA2B1P22626 353 aaKnown RBP12.05□□□□□ -0.48
UBE3B-209ENST00000539584 GPR3P46089 330 aa12.05□□□□□ -0.48
UBE3B-209ENST00000539584 CTXN1P60606 82 aa12.05□□□□□ -0.48
UBE3B-209ENST00000539584 MAT1AQ00266 395 aaKnown RBP12.05□□□□□ -0.48
UBE3B-209ENST00000539584 FUT7Q11130 342 aa12.05□□□□□ -0.48
UBE3B-209ENST00000539584 FAM53BQ14153 422 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms