RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 TRAV36DV7A0A075B6V5 113 aa11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 IGHV4-30-2A0A087WSY4 118 aa11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 PDLIM1O00151 329 aa11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 ETV2O00321 342 aaPredicted RBP11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 SEC14L5O43304 696 aa11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 OR2T1O43869 369 aa11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 LYPD3O95274 346 aa11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 NTN1O95631 604 aa11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 OPN1LWP04000 364 aa11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 HIST1H2ABP04908 130 aa11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 PRKACGP22612 351 aa11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 PEX2P28328 305 aa11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 RPS5P46782 204 aaKnown RBP11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 LIMS1P48059 325 aa11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 RAC1P63000 192 aa11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 SEC23BQ15437 767 aa11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 TMEM176BQ3YBM2 270 aaPredicted RBP11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 C1orf140Q5VVS0 124 aa11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 LPCAT4Q643R3 524 aa11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 PPP4R4Q6NUP7 873 aa11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 LINC00114Q6XXX2 140 aa11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 HIST3H2AQ7L7L0 130 aa11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 CHMP1BQ7LBR1 199 aa11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 TMEM179BQ7Z7N9 219 aa11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 HS3ST5Q8IZT8 346 aa11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 OR10H5Q8NGA6 315 aa11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 MAGEE2Q8TD90 523 aaPredicted RBP11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 HIST1H2ACQ93077 130 aa11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 GTPBP3Q969Y2 492 aaKnown RBP11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 ZNF524Q96C55 264 aa11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 SLC25A36Q96CQ1 311 aa11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 DNAJA3Q96EY1 480 aa11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 FAM46AQ96IP4 442 aaKnown RBP11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 ZNF845Q96IR2 970 aaPredicted RBP11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 TNFRSF13CQ96RJ3 184 aa11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 RBM4BQ9BQ04 359 aaKnown RBP11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 RBM4Q9BWF3 364 aaKnown RBP11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 OR11A1Q9GZK7 315 aa11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 GDF2Q9UK05 429 aaPredicted RBP11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 ZNF337Q9Y3M9 751 aa11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 MAGED1Q9Y5V3 778 aaPredicted RBP11.03□□□□□ -0.64
CLSTN3-208ENST00000538933 PLCE1Q9P212 2302 aa11.02□□□□□ -0.64
CLSTN3-208ENST00000538933 VWFP04275 2813 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 HTR3EA5X5Y0 456 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 ARRDC5A6NEK1 342 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 SLC22A20A6NK97 555 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 EFCAB9A8MZ26 197 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 SULT2B1O00204 365 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 EIF1AYO14602 144 aaKnown RBP11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 EI24O14681 340 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 CH25HO95992 272 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 CD8AP01732 235 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 PPP3CBP16298 524 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 CDH2P19022 906 aaPredicted RBP11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 IL11P20809 199 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 GSTM3P21266 225 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 CBLP22681 906 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 CFPP27918 469 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 GPR4P46093 362 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 CLK1P49759 484 aaKnown RBP11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 OR2B6P58173 313 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 RPS3AP61247 264 aaKnown RBP11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 CSNK2A1P68400 391 aaPredicted RBP11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 SIRPAP78324 504 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 PRKCDQ05655 676 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 DAG1Q14118 895 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 MFSD13AQ14CX5 517 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 BCL2A1Q16548 175 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 SGCBQ16585 318 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 FAM69AQ5T7M9 428 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 PGBD2Q6P3X8 592 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 STAC2Q6ZMT1 411 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 GALNT4Q8N4A0 578 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 CBR4Q8N4T8 237 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 DNAJC9Q8WXX5 260 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 BPIFA2Q96DR5 249 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 ZHX1-C8orf76Q96EF9 292 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 KTI12Q96EK9 354 aaPredicted RBP11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 KLHL15Q96M94 604 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 FEVQ99581 238 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 OSBPL10Q9BXB5 764 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 ASPNQ9BXN1 380 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 POTEKPQ9BYX7 375 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 NDEL1Q9GZM8 345 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 SHARPINQ9H0F6 387 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 GABARAPL1Q9H0R8 117 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 RNF122Q9H9V4 155 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 C8orf4Q9NR00 106 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 KRT84Q9NSB2 600 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 HDGFL3Q9Y3E1 203 aa11.02□□□□□ -0.65
CLSTN3-208ENST00000538933 IGKV1D-42A0A075B6H8 117 aa11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 A0A1W2PNR3 127 aa11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 ZC3H12DA2A288 527 aaKnown RBP11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 CASQ2O14958 399 aaPredicted RBP11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 OR6A2O95222 327 aa11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 ADAP00813 363 aa11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 MT-ATP6P00846 226 aa11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 GASTP01350 101 aa11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 EGR1P18146 543 aa11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 FUT1P19526 365 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms