RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 TMEM99Q8N816 258 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 BBS1Q8NFJ9 593 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 OR4D11Q8NGI4 311 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 OR4K15Q8NH41 348 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 SNIP1Q8TAD8 396 aaKnown RBP11.39□□□□□ -0.59
USP3-203ENST00000538686 NEK7Q8TDX7 302 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 SMIM19Q96E16 107 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 NEURL3Q96EH8 262 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 C4orf36Q96KX1 117 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 LINC00597Q9H2U6 94 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 CYTL1Q9NRR1 136 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 PRG3Q9Y2Y8 225 aaPredicted RBP11.39□□□□□ -0.59
USP3-203ENST00000538686 NOP16Q9Y3C1 178 aaKnown RBP11.39□□□□□ -0.59
USP3-203ENST00000538686 V9GYS6 101 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 PLXNA3P51805 1871 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 GREB1Q4ZG55 1949 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 IGLV3-10A0A075B6K4 115 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 EIF1AYO14602 144 aaKnown RBP11.39□□□□□ -0.59
USP3-203ENST00000538686 CIDEAO60543 219 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 GJB3O75712 270 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 PPP1R3DO95685 299 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 FURINP09958 794 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 GTF2F2P13984 249 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 FABP4P15090 132 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 EPHA1P21709 976 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 SERPINF1P36955 418 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 GPR3P46089 330 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 RABIFP47224 123 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 EIF1AXP47813 144 aaKnown RBP11.39□□□□□ -0.59
USP3-203ENST00000538686 SULT1A2P50226 295 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 CYCSP99999 105 aaKnown RBP11.39□□□□□ -0.59
USP3-203ENST00000538686 SMAD4Q13485 552 aaKnown RBP11.39□□□□□ -0.59
USP3-203ENST00000538686 WSCD1Q658N2 575 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 SERPINA13PQ6UXR4 307 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 CPOQ8IVL8 374 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 SCN4BQ8IWT1 228 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 ETFBKMTQ8IXQ9 262 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 LINC01465Q8N7H1 131 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 FRMD1Q8N878 549 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 ADPRHL1Q8NDY3 354 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 OR6J1Q8NGC5 347 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 OR4K14Q8NGD5 310 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 OR5AK3PQ8NH89 298 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 SECTM1Q8WVN6 248 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 HPSE2Q8WWQ2 592 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 FAM122AQ96E09 287 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 SLC12A9Q9BXP2 914 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 SELENOIQ9C0D9 397 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 CXCL16Q9H2A7 254 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 HINT3Q9NQE9 182 aaKnown RBP11.39□□□□□ -0.59
USP3-203ENST00000538686 ST6GALNAC2Q9UJ37 374 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 MTCL1Q9Y4B5 1905 aaKnown RBP11.38□□□□□ -0.59
USP3-203ENST00000538686 EVPLQ92817 2033 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 DOCK4Q8N1I0 1966 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 J3QLW9 94 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 INSIG1O15503 277 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 OR1F1O43749 312 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 HIST1H2BKO60814 126 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 ARG1P05089 322 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 HIST1H2BJP06899 126 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 SOD3P08294 240 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 NPSP0C0P6 89 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 ZNF19P17023 458 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 HIST1H2BOP23527 126 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 PSMB6P28072 239 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 HIST1H2BBP33778 126 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 ACVRL1P37023 503 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 PNLIPRP1P54315 467 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 HIST1H2BDP58876 126 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 ACTBP60709 375 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 HIST1H2BCP62807 126 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 ACTG1P63261 375 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 OR7A5Q15622 319 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 HIST2H2BEQ16778 126 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 ZNF674Q2M3X9 581 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.38□□□□□ -0.59
USP3-203ENST00000538686 CYB5RLQ6IPT4 315 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 UNQ9370/PRO34162Q6UXP9 181 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 SERPINA9Q86WD7 417 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 PRSS58Q8IYP2 241 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 ZNF664Q8N3J9 261 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 OR10A7Q8NGE5 316 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 LYPD6BQ8NI32 183 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 SLC2A12Q8TD20 617 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 HIST1H2BHQ93079 126 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 ZBTB8AQ96BR9 441 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 WDR92Q96MX6 357 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 HIST1H2BNQ99877 126 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 HIST1H2BMQ99879 126 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 V9GY05 133 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 LCTP09848 1927 aa11.38□□□□□ -0.59
USP3-203ENST00000538686 A0A1W2PPE2 198 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 CPED1A4D0V7 1026 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 PRSS47A8MTI9 375 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 C9JQL5 133 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 TAAR5O14804 337 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 P2RX6O15547 441 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 GPRIN2O60269 458 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 CH25HO95992 272 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 GCGP01275 180 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms