RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 OR1J4Q8NGS1 313 aa16.96■□□□□ 0.3
SFSWAP-207ENST00000538548 OR8S1Q8NH09 359 aa16.96■□□□□ 0.3
SFSWAP-207ENST00000538548 ARRDC3Q96B67 414 aa16.96■□□□□ 0.3
SFSWAP-207ENST00000538548 SLC25A21Q9BQT8 299 aaPredicted RBP16.96■□□□□ 0.3
SFSWAP-207ENST00000538548 POTEKPQ9BYX7 375 aa16.96■□□□□ 0.3
SFSWAP-207ENST00000538548 FBXO34Q9NWN3 711 aa16.96■□□□□ 0.3
SFSWAP-207ENST00000538548 SPTBN5Q9NRC6 3674 aaKnown RBP16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 TRBV5-5A0A0J9YX44 114 aa16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 SULT1C2O00338 296 aa16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 EIF3GO75821 320 aaKnown RBP eCLIP16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 FAM209BQ5JX69 171 aa16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 NKAIN2Q5VXU1 208 aa16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 RAB12Q6IQ22 244 aa16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 LIN54Q6MZP7 749 aa16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 ZNF813Q6ZN06 617 aa16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 SAMD14Q8IZD0 417 aaPredicted RBP16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 DVL3Q92997 716 aaPredicted RBP16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 MYOZ1Q9NP98 299 aaPredicted RBP16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 A0A1B0GWA3 101 aa16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 MEIS3P1A6NDR6 274 aa16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 MCIDASD6RGH6 385 aa16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 MAS1P04201 325 aa16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 GLAP06280 429 aa16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 HEXAP06865 529 aa16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 TACSTD2P09758 323 aa16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 ACTBP60709 375 aa16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 ACTG1P63261 375 aa16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 BTN3A2P78410 334 aa16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 HTRA4P83105 476 aaPredicted RBP16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 PLAURQ03405 335 aa16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 TAF13Q15543 124 aa16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 TEAD2Q15562 447 aa16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 BEX5Q5H9J7 111 aa16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 ERN2Q76MJ5 926 aaKnown RBP16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 NPEPL1Q8NDH3 523 aa16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 C2CD4CQ8TF44 421 aa16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 VWCEQ96DN2 955 aa16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 NMNAT3Q96T66 252 aa16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 FLRT3Q9NZU0 649 aa16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 CDV3Q9UKY7 258 aaKnown RBP16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 ADAM18Q9Y3Q7 739 aa16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 ENTPD2Q9Y5L3 495 aa16.95■□□□□ 0.3
SFSWAP-207ENST00000538548 TRAV18A0A075B6X5 111 aa16.94■□□□□ 0.3
SFSWAP-207ENST00000538548 FGF16O43320 207 aa16.94■□□□□ 0.3
SFSWAP-207ENST00000538548 RPP14O95059 124 aaKnown RBP16.94■□□□□ 0.3
SFSWAP-207ENST00000538548 ACAA1P09110 424 aaPredicted RBP16.94■□□□□ 0.3
SFSWAP-207ENST00000538548 GRPRP30550 384 aa16.94■□□□□ 0.3
SFSWAP-207ENST00000538548 VASPP50552 380 aaPredicted RBP16.94■□□□□ 0.3
SFSWAP-207ENST00000538548 ALKBH1Q13686 389 aaKnown RBP16.94■□□□□ 0.3
SFSWAP-207ENST00000538548 MTSS1LQ765P7 747 aa16.94■□□□□ 0.3
SFSWAP-207ENST00000538548 FAM220AQ7Z4H9 259 aa16.94■□□□□ 0.3
SFSWAP-207ENST00000538548 TMED4Q7Z7H5 227 aa16.94■□□□□ 0.3
SFSWAP-207ENST00000538548 GABRG1Q8N1C3 465 aa16.94■□□□□ 0.3
SFSWAP-207ENST00000538548 CCDC74AQ96AQ1 378 aa16.94■□□□□ 0.3
SFSWAP-207ENST00000538548 RBM18Q96H35 190 aaKnown RBP16.94■□□□□ 0.3
SFSWAP-207ENST00000538548 Q96M85 177 aa16.94■□□□□ 0.3
SFSWAP-207ENST00000538548 EFNB2P52799 333 aa16.94■□□□□ 0.3
SFSWAP-207ENST00000538548 DEFB103AP81534 67 aa16.94■□□□□ 0.3
SFSWAP-207ENST00000538548 MLF2Q15773 248 aaPredicted RBP16.94■□□□□ 0.3
SFSWAP-207ENST00000538548 SKA3Q8IX90 412 aa16.94■□□□□ 0.3
SFSWAP-207ENST00000538548 SLC39A11Q8N1S5 342 aa16.94■□□□□ 0.3
SFSWAP-207ENST00000538548 COX18Q8N8Q8 333 aa16.94■□□□□ 0.3
SFSWAP-207ENST00000538548 OR2L8Q8NGY9 312 aa16.94■□□□□ 0.3
SFSWAP-207ENST00000538548 FGF13Q92913 245 aa16.94■□□□□ 0.3
SFSWAP-207ENST00000538548 MYADMQ96S97 322 aa16.94■□□□□ 0.3
SFSWAP-207ENST00000538548 NMNAT2Q9BZQ4 307 aa16.94■□□□□ 0.3
SFSWAP-207ENST00000538548 TLNRD1Q9H1K6 362 aa16.94■□□□□ 0.3
SFSWAP-207ENST00000538548 SPHK1Q9NYA1 384 aa16.94■□□□□ 0.3
SFSWAP-207ENST00000538548 SNRNP200O75643 2136 aaKnown RBP16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 TRAV8-7A0A075B6U6 113 aa16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 A0A1B0GVT2 93 aa16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 F5H0A9 414 aaPredicted RBP16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 WNT11O96014 354 aa16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 ACTL6AO96019 429 aa16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 SMIM6P0DI80 62 aa16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 ADRB3P13945 408 aa16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 CASRP41180 1078 aa16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 GPR143P51810 404 aa16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 TAS2R19P59542 299 aa16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 LIPNQ5VXI9 398 aa16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 TMEM71Q6P5X7 295 aa16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 ADAMTSL4Q6UY14 1074 aa16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 OR4K14Q8NGD5 310 aa16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 ZNF417Q8TAU3 575 aa16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 INSM2Q96T92 566 aaPredicted RBP16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 GPR174Q9BXC1 333 aa16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 DUSP22Q9NRW4 184 aa16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 YBX2Q9Y2T7 364 aaKnown RBP16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 MEX3AA1L020 520 aaKnown RBP16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 NUDT19A8MXV4 375 aa16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 FAM25EA8MYX2 175 aa16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 FABP1P07148 127 aa16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 CSF2RAP15509 400 aa16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 CD34P28906 385 aa16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 DHRS2Q13268 280 aa16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 SMAD2Q15796 467 aaKnown RBP16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 LRRC37A5PQ49AS3 106 aa16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 OR51D1Q8NGF3 324 aa16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 RXFP4Q8TDU9 374 aa16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 GPX8Q8TED1 209 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms