RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 MNTQ99583 582 aa12.67□□□□□ -0.38
LIMK1-208ENST00000538333 SLC7A5P2Q9GIP4 190 aa12.67□□□□□ -0.38
LIMK1-208ENST00000538333 TSPAN10Q9H1Z9 355 aaPredicted RBP12.67□□□□□ -0.38
LIMK1-208ENST00000538333 BRD7Q9NPI1 651 aa12.67□□□□□ -0.38
LIMK1-208ENST00000538333 FRRS1LQ9P0K9 344 aa12.67□□□□□ -0.38
LIMK1-208ENST00000538333 PPIEQ9UNP9 301 aaKnown RBP12.67□□□□□ -0.38
LIMK1-208ENST00000538333 A0A1B0GTQ1 180 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 EEF1E1O43324 174 aaKnown RBP12.66□□□□□ -0.38
LIMK1-208ENST00000538333 SLC43A1O75387 559 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 RPP14O95059 124 aaKnown RBP12.66□□□□□ -0.38
LIMK1-208ENST00000538333 UBL3O95164 117 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 GPANK1O95872 356 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 BTCP35070 178 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 SLC26A5P58743 744 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 IFITM2Q01629 132 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 MRPL28Q13084 256 aaKnown RBP12.66□□□□□ -0.38
LIMK1-208ENST00000538333 NR0B2Q15466 257 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 C1orf140Q5VVS0 124 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 DPY19L4Q7Z388 723 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 OR6N2Q8NGY6 317 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 SAP25Q8TEE9 199 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 ITFG2Q969R8 447 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 SLC25A36Q96CQ1 311 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 KLHL15Q96M94 604 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 OR6C1Q96RD1 312 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 LAMP5Q9UJQ1 280 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 PCDHGA9Q9Y5G4 932 aaKnown RBP12.66□□□□□ -0.38
LIMK1-208ENST00000538333 ALG5Q9Y673 324 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 ADAMTS9Q9P2N4 1935 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 CPED1A4D0V7 1026 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 RPS27P42677 84 aaKnown RBP12.66□□□□□ -0.38
LIMK1-208ENST00000538333 DHPSP49366 369 aaPredicted RBP12.66□□□□□ -0.38
LIMK1-208ENST00000538333 RPL27P61353 136 aaKnown RBP12.66□□□□□ -0.38
LIMK1-208ENST00000538333 CCL7P80098 99 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 EGR3Q06889 387 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 ACKR1Q16570 336 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 COL28A1Q2UY09 1125 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 SLC36A2Q495M3 483 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 PLA1AQ53H76 456 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 HACD4Q5VWC8 232 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 ZNF385CQ66K41 422 aaPredicted RBP12.66□□□□□ -0.38
LIMK1-208ENST00000538333 PWWP2BQ6NUJ5 590 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 ASB18Q6ZVZ8 466 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 MISPQ8IVT2 679 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 YIPF7Q8N8F6 280 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 LGALS14Q8TCE9 139 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 STK35Q8TDR2 534 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 UBASH3BQ8TF42 649 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 METTL21AQ8WXB1 218 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 YIPF5Q969M3 257 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 CMTM3Q96MX0 182 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 SNX18Q96RF0 628 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 INTS14Q96SY0 518 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 CLEC4AQ9UMR7 237 aa12.66□□□□□ -0.38
LIMK1-208ENST00000538333 TRBV5-5A0A0J9YX44 114 aa12.65□□□□□ -0.38
LIMK1-208ENST00000538333 IGHV5-10-1A0A0J9YXX1 117 aa12.65□□□□□ -0.38
LIMK1-208ENST00000538333 PRSS37A4D1T9 235 aa12.65□□□□□ -0.38
LIMK1-208ENST00000538333 TMEM200CA6NKL6 621 aa12.65□□□□□ -0.38
LIMK1-208ENST00000538333 AIPO00170 330 aa12.65□□□□□ -0.38
LIMK1-208ENST00000538333 SIGLEC6O43699 453 aa12.65□□□□□ -0.38
LIMK1-208ENST00000538333 ALOX12BO75342 701 aa12.65□□□□□ -0.38
LIMK1-208ENST00000538333 IGHMP01871 453 aa12.65□□□□□ -0.38
LIMK1-208ENST00000538333 MMP15P51511 669 aa12.65□□□□□ -0.38
LIMK1-208ENST00000538333 FBXW4P57775 412 aa12.65□□□□□ -0.38
LIMK1-208ENST00000538333 EFR3AQ14156 821 aa12.65□□□□□ -0.38
LIMK1-208ENST00000538333 ESPNLQ6ZVH7 1005 aa12.65□□□□□ -0.38
LIMK1-208ENST00000538333 NUBPLQ8TB37 319 aa12.65□□□□□ -0.38
LIMK1-208ENST00000538333 WDR77Q9BQA1 342 aaPredicted RBP12.65□□□□□ -0.38
LIMK1-208ENST00000538333 OR11A1Q9GZK7 315 aa12.65□□□□□ -0.38
LIMK1-208ENST00000538333 SLC25A18Q9H1K4 315 aa12.65□□□□□ -0.38
LIMK1-208ENST00000538333 ABCG5Q9H222 651 aa12.65□□□□□ -0.38
LIMK1-208ENST00000538333 TXNIPQ9H3M7 391 aa12.65□□□□□ -0.38
LIMK1-208ENST00000538333 RANGRFQ9HD47 186 aaPredicted RBP12.65□□□□□ -0.38
LIMK1-208ENST00000538333 FKBP7Q9Y680 259 aa12.65□□□□□ -0.38
LIMK1-208ENST00000538333 CCDC163A0A0D9SF12 145 aa12.64□□□□□ -0.39
LIMK1-208ENST00000538333 A0A1B0GTH9 108 aa12.64□□□□□ -0.39
LIMK1-208ENST00000538333 OR4C45A6NMZ5 311 aa12.64□□□□□ -0.39
LIMK1-208ENST00000538333 IFITM5A6NNB3 132 aa12.64□□□□□ -0.39
LIMK1-208ENST00000538333 FTCDNL1E5RQL4 147 aa12.64□□□□□ -0.39
LIMK1-208ENST00000538333 XKRYO14609 159 aa12.64□□□□□ -0.39
LIMK1-208ENST00000538333 SCRG1O75711 98 aa12.64□□□□□ -0.39
LIMK1-208ENST00000538333 PLGP00747 810 aaPredicted RBP12.64□□□□□ -0.39
LIMK1-208ENST00000538333 HEXBP07686 556 aa12.64□□□□□ -0.39
LIMK1-208ENST00000538333 HOXA6P31267 233 aa12.64□□□□□ -0.39
LIMK1-208ENST00000538333 INSM1Q01101 510 aaPredicted RBP12.64□□□□□ -0.39
LIMK1-208ENST00000538333 Q499Y3 187 aa12.64□□□□□ -0.39
LIMK1-208ENST00000538333 ZFP69Q49AA0 526 aa12.64□□□□□ -0.39
LIMK1-208ENST00000538333 PMS2CLQ68D20 193 aa12.64□□□□□ -0.39
LIMK1-208ENST00000538333 FAM199XQ6PEV8 388 aaPredicted RBP12.64□□□□□ -0.39
LIMK1-208ENST00000538333 MAMSTRQ6ZN01 415 aa12.64□□□□□ -0.39
LIMK1-208ENST00000538333 OR5AK2Q8NH90 309 aa12.64□□□□□ -0.39
LIMK1-208ENST00000538333 OTOSQ8NHW6 89 aa12.64□□□□□ -0.39
LIMK1-208ENST00000538333 RNF138Q8WVD3 245 aa12.64□□□□□ -0.39
LIMK1-208ENST00000538333 CREB3L1Q96BA8 519 aa12.64□□□□□ -0.39
LIMK1-208ENST00000538333 DMRTB1Q96MA1 342 aa12.64□□□□□ -0.39
LIMK1-208ENST00000538333 FYTTD1Q96QD9 318 aaKnown RBP12.64□□□□□ -0.39
LIMK1-208ENST00000538333 AMELYQ99218 206 aa12.64□□□□□ -0.39
LIMK1-208ENST00000538333 NPAS1Q99742 590 aa12.64□□□□□ -0.39
LIMK1-208ENST00000538333 OR2B2Q9GZK3 357 aa12.64□□□□□ -0.39
LIMK1-208ENST00000538333 FSCN3Q9NQT6 498 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms