RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 MAML2Q8IZL2 1156 aaPredicted RBP15.51■□□□□ 0.07
SCARB1-205ENST00000538291 ZNF583Q96ND8 569 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 ELF4Q99607 663 aaPredicted RBP15.51■□□□□ 0.07
SCARB1-205ENST00000538291 NRSN2Q9GZP1 204 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 BIN3Q9NQY0 253 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 CLDN24A6NM45 220 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 GABARAPH6UMI1 98 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 DOK2O60496 412 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 GABARAPO95166 117 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 FPR3P25089 353 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 RBMS2Q15434 407 aaKnown RBP15.5■□□□□ 0.07
SCARB1-205ENST00000538291 CST9LP1Q5W188 147 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 TMEM255BQ8WV15 326 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 CHTF18Q8WVB6 975 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 ZNF582Q96NG8 517 aaPredicted RBP15.5■□□□□ 0.07
SCARB1-205ENST00000538291 SLC38A1Q9H2H9 487 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 CD300AQ9UGN4 299 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 NDRG4Q9ULP0 352 aaKnown RBP15.5■□□□□ 0.07
SCARB1-205ENST00000538291 ALPLP05186 524 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 APOBEC1P41238 236 aaKnown RBP15.5■□□□□ 0.07
SCARB1-205ENST00000538291 RAB11AP62491 216 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 SMN1Q16637 294 aaKnown RBP15.5■□□□□ 0.07
SCARB1-205ENST00000538291 MEP1BQ16820 701 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 PYCR3Q53H96 274 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 SYT9Q86SS6 491 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 INTS12Q96CB8 462 aaKnown RBP15.5■□□□□ 0.07
SCARB1-205ENST00000538291 SEMA4GQ9NTN9 838 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 FAM53CQ9NYF3 392 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 RPH3ALQ9UNE2 315 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 NPFFR2Q9Y5X5 522 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 LAMB4A4D0S4 1761 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 UBBP0CG47 229 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 SNRPBP14678 240 aaKnown RBP15.5■□□□□ 0.07
SCARB1-205ENST00000538291 ZNF750Q32MQ0 723 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 Q6ZSR9 355 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 SIRT6Q8N6T7 355 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 ABHD6Q9BV23 337 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 BTBD17A6NE02 478 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 K7EPK0 472 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 HBG1P69891 147 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 HBG2P69892 147 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 FAM71E1Q6IPT2 247 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 SLC22A25Q6T423 547 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 FAM71E2Q8N5Q1 922 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 OR56B4Q8NH76 319 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 PAQR8Q8TEZ7 354 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 OR2M2Q96R28 347 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 GNG13Q9P2W3 67 aa15.5■□□□□ 0.07
SCARB1-205ENST00000538291 PIP5K1CO60331 668 aa15.49■□□□□ 0.07
SCARB1-205ENST00000538291 SRFP11831 508 aa15.49■□□□□ 0.07
SCARB1-205ENST00000538291 ZNF93P35789 620 aaPredicted RBP15.49■□□□□ 0.07
SCARB1-205ENST00000538291 P2RX1P51575 399 aa15.49■□□□□ 0.07
SCARB1-205ENST00000538291 PLK5Q496M5 336 aa15.49■□□□□ 0.07
SCARB1-205ENST00000538291 B3GLCTQ6Y288 498 aa15.49■□□□□ 0.07
SCARB1-205ENST00000538291 RTN4RL1Q86UN2 441 aaPredicted RBP15.49■□□□□ 0.07
SCARB1-205ENST00000538291 UBALD2Q8IYN6 164 aa15.49■□□□□ 0.07
SCARB1-205ENST00000538291 SLC16A11Q8NCK7 471 aa15.49■□□□□ 0.07
SCARB1-205ENST00000538291 CPNE4Q96A23 557 aaPredicted RBP15.49■□□□□ 0.07
SCARB1-205ENST00000538291 HRASLS5Q96KN8 279 aa15.49■□□□□ 0.07
SCARB1-205ENST00000538291 CXCL16Q9H2A7 254 aa15.49■□□□□ 0.07
SCARB1-205ENST00000538291 KLF13Q9Y2Y9 288 aaPredicted RBP15.49■□□□□ 0.07
SCARB1-205ENST00000538291 ZNF705FA8MVS1 300 aaPredicted RBP15.49■□□□□ 0.07
SCARB1-205ENST00000538291 ZNF705DP0CH99 300 aaPredicted RBP15.49■□□□□ 0.07
SCARB1-205ENST00000538291 ZNF705BP0CI00 300 aaPredicted RBP15.49■□□□□ 0.07
SCARB1-205ENST00000538291 ZNF728P0DKX0 622 aa15.49■□□□□ 0.07
SCARB1-205ENST00000538291 ELAVL4P26378 380 aaKnown RBP15.49■□□□□ 0.07
SCARB1-205ENST00000538291 CLDN12P56749 244 aa15.49■□□□□ 0.07
SCARB1-205ENST00000538291 CCSMST1Q4G0I0 132 aa15.49■□□□□ 0.07
SCARB1-205ENST00000538291 SHEQ5VZ18 495 aa15.49■□□□□ 0.07
SCARB1-205ENST00000538291 ZNF836Q6ZNA1 936 aa15.49■□□□□ 0.07
SCARB1-205ENST00000538291 IDO2Q6ZQW0 420 aa15.49■□□□□ 0.07
SCARB1-205ENST00000538291 OR6V1Q8N148 313 aa15.49■□□□□ 0.07
SCARB1-205ENST00000538291 STT3BQ8TCJ2 826 aa15.49■□□□□ 0.07
SCARB1-205ENST00000538291 ITPKCQ96DU7 683 aa15.49■□□□□ 0.07
SCARB1-205ENST00000538291 TBC1D29Q9UFV1 150 aa15.49■□□□□ 0.07
SCARB1-205ENST00000538291 NCR1O76036 304 aa15.49■□□□□ 0.07
SCARB1-205ENST00000538291 GCAP28676 217 aa15.49■□□□□ 0.07
SCARB1-205ENST00000538291 CCR5P51681 352 aa15.49■□□□□ 0.07
SCARB1-205ENST00000538291 ACSM1Q08AH1 577 aa15.49■□□□□ 0.07
SCARB1-205ENST00000538291 ALKBH1Q13686 389 aaKnown RBP15.49■□□□□ 0.07
SCARB1-205ENST00000538291 ZNF546Q86UE3 836 aa15.49■□□□□ 0.07
SCARB1-205ENST00000538291 LSMEM2Q8N112 164 aa15.49■□□□□ 0.07
SCARB1-205ENST00000538291 MENTQ9BUN1 341 aa15.49■□□□□ 0.07
SCARB1-205ENST00000538291 TMEM38AQ9H6F2 299 aa15.49■□□□□ 0.07
SCARB1-205ENST00000538291 HTR1FP30939 366 aa15.49■□□□□ 0.07
SCARB1-205ENST00000538291 DAPP51397 102 aa15.49■□□□□ 0.07
SCARB1-205ENST00000538291 ATPAF1Q5TC12 328 aaPredicted RBP15.49■□□□□ 0.07
SCARB1-205ENST00000538291 RETREG3Q86VR2 466 aa15.49■□□□□ 0.07
SCARB1-205ENST00000538291 OR52A1Q9UKL2 312 aa15.49■□□□□ 0.07
SCARB1-205ENST00000538291 TMEM202A6NGA9 273 aa15.48■□□□□ 0.07
SCARB1-205ENST00000538291 VAMP5O95183 116 aa15.48■□□□□ 0.07
SCARB1-205ENST00000538291 IL2RAP01589 272 aa15.48■□□□□ 0.07
SCARB1-205ENST00000538291 GRPP07492 148 aa15.48■□□□□ 0.07
SCARB1-205ENST00000538291 SELEP16581 610 aa15.48■□□□□ 0.07
SCARB1-205ENST00000538291 SLC35D3Q5M8T2 416 aa15.48■□□□□ 0.07
SCARB1-205ENST00000538291 WWTR1Q9GZV5 400 aa15.48■□□□□ 0.07
SCARB1-205ENST00000538291 LANCL2Q9NS86 450 aa15.48■□□□□ 0.07
SCARB1-205ENST00000538291 MEIOCA2RUB1 952 aa15.48■□□□□ 0.07
SCARB1-205ENST00000538291 RAP2BP61225 183 aa15.48■□□□□ 0.07
SCARB1-205ENST00000538291 ARL16Q0P5N6 197 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms