RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 UNKLQ9H9P5 680 aaKnown RBP5.34□□□□□ -1.55
CHD4-206ENST00000536999 APMAPQ9HDC9 416 aa5.34□□□□□ -1.55
CHD4-206ENST00000536999 SLAMF7Q9NQ25 335 aa5.34□□□□□ -1.55
CHD4-206ENST00000536999 PHPT1Q9NRX4 125 aaPredicted RBP5.34□□□□□ -1.55
CHD4-206ENST00000536999 SLC2A8Q9NY64 477 aa5.34□□□□□ -1.55
CHD4-206ENST00000536999 PIPOXQ9P0Z9 390 aa5.34□□□□□ -1.55
CHD4-206ENST00000536999 CD84Q9UIB8 345 aa5.34□□□□□ -1.55
CHD4-206ENST00000536999 ST6GALNAC2Q9UJ37 374 aa5.34□□□□□ -1.55
CHD4-206ENST00000536999 ZNF223Q9UK11 482 aaPredicted RBP5.34□□□□□ -1.55
CHD4-206ENST00000536999 FBXL4Q9UKA2 621 aa5.34□□□□□ -1.55
CHD4-206ENST00000536999 MRTO4Q9UKD2 239 aaKnown RBP5.34□□□□□ -1.55
CHD4-206ENST00000536999 KLK13Q9UKR3 277 aa5.34□□□□□ -1.55
CHD4-206ENST00000536999 MKL2Q9ULH7 1088 aa5.34□□□□□ -1.55
CHD4-206ENST00000536999 COPS3Q9UNS2 423 aa5.34□□□□□ -1.55
CHD4-206ENST00000536999 C19orf53Q9UNZ5 99 aaPredicted RBP5.34□□□□□ -1.55
CHD4-206ENST00000536999 FOXJ3Q9UPW0 622 aa5.34□□□□□ -1.55
CHD4-206ENST00000536999 SIGLEC7Q9Y286 467 aa5.34□□□□□ -1.55
CHD4-206ENST00000536999 MRPS17Q9Y2R5 130 aaKnown RBP5.34□□□□□ -1.55
CHD4-206ENST00000536999 CARHSP1Q9Y2V2 147 aaKnown RBP5.34□□□□□ -1.55
CHD4-206ENST00000536999 CHST2Q9Y4C5 530 aa5.34□□□□□ -1.55
CHD4-206ENST00000536999 CELSR3Q9NYQ7 3312 aa5.34□□□□□ -1.55
CHD4-206ENST00000536999 FREM2Q5SZK8 3169 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 DENND4AQ7Z401 1863 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 A0A0B4J2A0 478 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 LOC100289279A0A1B0GTE1 492 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 RNF222A6NCQ9 220 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 TVP23AA6NH52 213 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 OR5H14A6NHG9 310 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 OR5K4A6NMS3 321 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 SOCS6O14544 535 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 HMGB3O15347 200 aaKnown RBP5.33□□□□□ -1.56
CHD4-206ENST00000536999 ERI3O43414 337 aaKnown RBP5.33□□□□□ -1.56
CHD4-206ENST00000536999 TMPRSS11DO60235 418 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 SH3BGRLO75368 114 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 MTX2O75431 263 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 C1QL1O75973 258 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 TOXO94900 526 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 KDM4BO94953 1096 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 RENP00797 406 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 HPXP02790 462 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 ERCC1P07992 297 aaPredicted RBP5.33□□□□□ -1.56
CHD4-206ENST00000536999 POU2F2P09086 479 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 CEACAM1P13688 526 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 GTF2F2P13984 249 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 SNRPBP14678 240 aaKnown RBP5.33□□□□□ -1.56
CHD4-206ENST00000536999 CXCL2P19875 107 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 RAB6AP20340 208 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 PBLDP30039 288 aaPredicted RBP5.33□□□□□ -1.56
CHD4-206ENST00000536999 SOX18P35713 384 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 ACVR1BP36896 505 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 RFC3P40938 356 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 PTH2RP49190 550 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 P2RX1P51575 399 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 OR12D2P58182 307 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 KIAA1024LP59773 190 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 ZP1P60852 638 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 ADAM8P78325 824 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 MAT1AQ00266 395 aaKnown RBP5.33□□□□□ -1.56
CHD4-206ENST00000536999 ZNF85Q03923 595 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 LTBQ06643 244 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 AIMP2Q13155 320 aaKnown RBP5.33□□□□□ -1.56
CHD4-206ENST00000536999 ALKBH1Q13686 389 aaKnown RBP5.33□□□□□ -1.56
CHD4-206ENST00000536999 PCGF3Q3KNV8 242 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 AVPI1Q5T686 147 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 TXNDC8Q6A555 127 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 ZNF660Q6AZW8 331 aaPredicted RBP5.33□□□□□ -1.56
CHD4-206ENST00000536999 DHRS7BQ6IAN0 325 aaPredicted RBP5.33□□□□□ -1.56
CHD4-206ENST00000536999 C11orf87Q6NUJ2 197 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 STEAP1BQ6NZ63 245 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 FDX2Q6P4F2 183 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 FAM199XQ6PEV8 388 aaPredicted RBP5.33□□□□□ -1.56
CHD4-206ENST00000536999 KCTD18Q6PI47 426 aaPredicted RBP5.33□□□□□ -1.56
CHD4-206ENST00000536999 FAM111BQ6SJ93 734 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 C5orf46Q6UWT4 87 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 FCRLAQ7L513 359 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 SLC36A1Q7Z2H8 476 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 MAMDC2Q7Z304 686 aaPredicted RBP5.33□□□□□ -1.56
CHD4-206ENST00000536999 ADIPOR2Q86V24 386 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 GLCCI1Q86VQ1 547 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 JAZF1Q86VZ6 243 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 DND1Q8IYX4 353 aaKnown RBP5.33□□□□□ -1.56
CHD4-206ENST00000536999 CMTM8Q8IZV2 173 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 GALNT16Q8N428 558 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 ZNF561Q8N587 486 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 C15orf54Q8N8G6 183 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 COX18Q8N8Q8 333 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 OR4E2Q8NGC2 313 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 OR52H1Q8NGJ2 320 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 OR5M8Q8NGP6 311 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 OR1S1Q8NH92 325 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 LGALS14Q8TCE9 139 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 LIPHQ8WWY8 451 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 AUTS2Q8WXX7 1259 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 HSD17B8Q92506 261 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 KISS1RQ969F8 398 aaPredicted RBP5.33□□□□□ -1.56
CHD4-206ENST00000536999 PELI1Q96FA3 418 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 COX14Q96I36 57 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 LINC00052Q96N35 136 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 DERL3Q96Q80 235 aa5.33□□□□□ -1.56
CHD4-206ENST00000536999 FERD3LQ96RJ6 166 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms