RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 CSNK2A2P19784 350 aaPredicted RBP12.79□□□□□ -0.36
LIG1-203ENST00000536218 PPP2R1BP30154 601 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 FRKP42685 505 aaPredicted RBP12.79□□□□□ -0.36
LIG1-203ENST00000536218 PPM1FP49593 454 aaPredicted RBP12.79□□□□□ -0.36
LIG1-203ENST00000536218 AP3S2P59780 193 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 RAB2AP61019 212 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 POU4F2Q12837 409 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 ILF3Q12906 894 aaKnown RBP eCLIP12.79□□□□□ -0.36
LIG1-203ENST00000536218 SLC25A30Q5SVS4 291 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 FAM160A2Q8N612 972 aaPredicted RBP12.79□□□□□ -0.36
LIG1-203ENST00000536218 SIRT6Q8N6T7 355 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 ABHD4Q8TB40 342 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 FAM3CQ92520 227 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 ORAI1Q96D31 301 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 SSX3Q99909 188 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 TGIF2Q9GZN2 237 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 FBRSQ9HAH7 460 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 TAS2R10Q9NYW0 307 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 FRS3O43559 492 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 TBX19O60806 448 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 STX11O75558 287 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 PON3Q15166 354 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 CMTM4Q8IZR5 234 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 FAM98AQ8NCA5 519 aaKnown RBP12.79□□□□□ -0.36
LIG1-203ENST00000536218 SNX33Q8WV41 574 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 ZG16BQ96DA0 208 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 ALG8Q9BVK2 526 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 TMEM74BQ9NUR3 256 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 MOKQ9UQ07 419 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 ZNF780BQ9Y6R6 833 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 ZNF879B4DU55 563 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 P2RX6O15547 441 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 RAD1O60671 282 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 KRT33AO76009 404 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 ACTL6AO96019 429 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 MUC1P15941 1255 aaPredicted RBP12.78□□□□□ -0.36
LIG1-203ENST00000536218 TYRP1P17643 537 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 HCCSP53701 268 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 SMIM11AP58511 58 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 TRA2BP62995 288 aaKnown RBP12.78□□□□□ -0.36
LIG1-203ENST00000536218 ACSM3Q53FZ2 586 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 UQCC3Q6UW78 93 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 MISPQ8IVT2 679 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 SKA3Q8IX90 412 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 OR2AK2Q8NG84 335 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 OR10H5Q8NGA6 315 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 CNTNAP3BQ96NU0 1288 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 GPR174Q9BXC1 333 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 STARD5Q9NSY2 213 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 DMRT1Q9Y5R6 373 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 SLCO1B1Q9Y6L6 691 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 APBB3O95704 486 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 CHRM4P08173 479 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 SLC35G6P0C7Q6 338 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 NDUFS1P28331 727 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 MPIP34949 423 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 RNF144AP50876 292 aaPredicted RBP12.78□□□□□ -0.36
LIG1-203ENST00000536218 DCDP81605 110 aaKnown RBP12.78□□□□□ -0.36
LIG1-203ENST00000536218 CHAF1BQ13112 559 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 TGIF1Q15583 401 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 PLEKHN1Q494U1 663 aaPredicted RBP12.78□□□□□ -0.36
LIG1-203ENST00000536218 C4orf46Q504U0 113 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 NCMAPQ5T1S8 102 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 MRM1Q6IN84 353 aaKnown RBP12.78□□□□□ -0.36
LIG1-203ENST00000536218 SLC48A1Q6P1K1 146 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 FIGLAQ6QHK4 219 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 TAF8Q7Z7C8 310 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 NRROSQ86YC3 692 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 POGLUT1Q8NBL1 392 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 SMAP2Q8WU79 429 aaPredicted RBP12.78□□□□□ -0.36
LIG1-203ENST00000536218 S100PBPQ96BU1 408 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 TPSD1Q9BZJ3 242 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 MEPEQ9NQ76 525 aaPredicted RBP12.78□□□□□ -0.36
LIG1-203ENST00000536218 KLF15Q9UIH9 416 aa12.78□□□□□ -0.36
LIG1-203ENST00000536218 TERTO14746 1132 aaKnown RBP12.77□□□□□ -0.36
LIG1-203ENST00000536218 RPA2P15927 270 aa12.77□□□□□ -0.36
LIG1-203ENST00000536218 PPP1CAP62136 330 aa12.77□□□□□ -0.36
LIG1-203ENST00000536218 SHC2P98077 582 aa12.77□□□□□ -0.36
LIG1-203ENST00000536218 ETV3LQ6ZN32 361 aa12.77□□□□□ -0.36
LIG1-203ENST00000536218 NUP43Q8NFH3 380 aa12.77□□□□□ -0.36
LIG1-203ENST00000536218 FCAMRQ8WWV6 532 aa12.77□□□□□ -0.36
LIG1-203ENST00000536218 LURAP1Q96LR2 239 aa12.77□□□□□ -0.36
LIG1-203ENST00000536218 NAA11Q9BSU3 229 aaPredicted RBP12.77□□□□□ -0.36
LIG1-203ENST00000536218 TRIM36Q9NQ86 728 aa12.77□□□□□ -0.36
LIG1-203ENST00000536218 KLHL9Q9P2J3 617 aa12.77□□□□□ -0.36
LIG1-203ENST00000536218 FAM96BQ9Y3D0 163 aa12.77□□□□□ -0.36
LIG1-203ENST00000536218 DAPL1A0PJW8 107 aa12.77□□□□□ -0.37
LIG1-203ENST00000536218 ANKRD61A6NGH8 418 aa12.77□□□□□ -0.37
LIG1-203ENST00000536218 COLCA2A8K830 154 aa12.77□□□□□ -0.37
LIG1-203ENST00000536218 SNRPGP15A8MWD9 76 aa12.77□□□□□ -0.37
LIG1-203ENST00000536218 J3QLW9 94 aa12.77□□□□□ -0.37
LIG1-203ENST00000536218 ATP1B1P05026 303 aa12.77□□□□□ -0.37
LIG1-203ENST00000536218 GAAP10253 952 aa12.77□□□□□ -0.37
LIG1-203ENST00000536218 APEHP13798 732 aaKnown RBP12.77□□□□□ -0.37
LIG1-203ENST00000536218 GNSP15586 552 aa12.77□□□□□ -0.37
LIG1-203ENST00000536218 ZNF19P17023 458 aa12.77□□□□□ -0.37
LIG1-203ENST00000536218 EIF2S3P41091 472 aaKnown RBP12.77□□□□□ -0.37
LIG1-203ENST00000536218 EFNB1P98172 346 aa12.77□□□□□ -0.37
LIG1-203ENST00000536218 UNQ6126/PRO20091Q6UXV3 157 aa12.77□□□□□ -0.37
LIG1-203ENST00000536218 PRSS41Q7RTY9 318 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms