RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 PSG5Q15238 335 aa2.88□□□□□ -1.95
PRKDC-205ENST00000535375 SSX2Q16385 188 aa2.88□□□□□ -1.95
PRKDC-205ENST00000535375 DGUOKQ16854 277 aa2.88□□□□□ -1.95
PRKDC-205ENST00000535375 DMRTC1Q5HYR2 192 aa2.88□□□□□ -1.95
PRKDC-205ENST00000535375 PRSS41Q7RTY9 318 aa2.88□□□□□ -1.95
PRKDC-205ENST00000535375 NANOGNBQ7Z5D8 188 aa2.88□□□□□ -1.95
PRKDC-205ENST00000535375 ECHDC2Q86YB7 292 aa2.88□□□□□ -1.95
PRKDC-205ENST00000535375 RDH10Q8IZV5 341 aa2.88□□□□□ -1.95
PRKDC-205ENST00000535375 CCDC54Q8NEL0 328 aa2.88□□□□□ -1.95
PRKDC-205ENST00000535375 NPBQ8NG41 125 aa2.88□□□□□ -1.95
PRKDC-205ENST00000535375 OR2L3Q8NG85 312 aa2.88□□□□□ -1.95
PRKDC-205ENST00000535375 GIMAP1Q8WWP7 306 aa2.88□□□□□ -1.95
PRKDC-205ENST00000535375 UFD1Q92890 307 aa2.88□□□□□ -1.95
PRKDC-205ENST00000535375 PAGE5Q96GU1 130 aa2.88□□□□□ -1.95
PRKDC-205ENST00000535375 CLCC1Q96S66 551 aa2.88□□□□□ -1.95
PRKDC-205ENST00000535375 SUDS3Q9H7L9 328 aaPredicted RBP2.88□□□□□ -1.95
PRKDC-205ENST00000535375 NMRAL1Q9HBL8 299 aa2.88□□□□□ -1.95
PRKDC-205ENST00000535375 SPATA7Q9P0W8 599 aa2.88□□□□□ -1.95
PRKDC-205ENST00000535375 PISDQ9UG56 409 aa2.88□□□□□ -1.95
PRKDC-205ENST00000535375 GNPTGQ9UJJ9 305 aa2.88□□□□□ -1.95
PRKDC-205ENST00000535375 COPS3Q9UNS2 423 aa2.88□□□□□ -1.95
PRKDC-205ENST00000535375 RPL36Q9Y3U8 105 aaKnown RBP2.88□□□□□ -1.95
PRKDC-205ENST00000535375 FRMPD3Q5JV73 1810 aa2.88□□□□□ -1.95
PRKDC-205ENST00000535375 TCRBV9S1A1TA0A576 114 aa2.87□□□□□ -1.95
PRKDC-205ENST00000535375 CST1P01037 141 aa2.87□□□□□ -1.95
PRKDC-205ENST00000535375 IGFBP3P17936 291 aaPredicted RBP2.87□□□□□ -1.95
PRKDC-205ENST00000535375 CD1CP29017 333 aa2.87□□□□□ -1.95
PRKDC-205ENST00000535375 VHLP40337 213 aa2.87□□□□□ -1.95
PRKDC-205ENST00000535375 SLC26A3P40879 764 aa2.87□□□□□ -1.95
PRKDC-205ENST00000535375 SSR1P43307 286 aaKnown RBP2.87□□□□□ -1.95
PRKDC-205ENST00000535375 GYG1P46976 350 aa2.87□□□□□ -1.95
PRKDC-205ENST00000535375 ARRB1P49407 418 aaPredicted RBP2.87□□□□□ -1.95
PRKDC-205ENST00000535375 TPMTP51580 245 aa2.87□□□□□ -1.95
PRKDC-205ENST00000535375 ZNF763Q0D2J5 394 aa2.87□□□□□ -1.95
PRKDC-205ENST00000535375 BST2Q10589 180 aaKnown RBP2.87□□□□□ -1.95
PRKDC-205ENST00000535375 PPIL2Q13356 520 aa2.87□□□□□ -1.95
PRKDC-205ENST00000535375 OXA1LQ15070 435 aa2.87□□□□□ -1.95
PRKDC-205ENST00000535375 IMMTQ16891 758 aaKnown RBP2.87□□□□□ -1.95
PRKDC-205ENST00000535375 DEFB116Q30KQ4 102 aa2.87□□□□□ -1.95
PRKDC-205ENST00000535375 OR52E8Q6IFG1 317 aa2.87□□□□□ -1.95
PRKDC-205ENST00000535375 FRMPD2BQ6IN97 320 aa2.87□□□□□ -1.95
PRKDC-205ENST00000535375 SLC25A48Q6ZT89 311 aaKnown RBP2.87□□□□□ -1.95
PRKDC-205ENST00000535375 PGAP1Q75T13 922 aa2.87□□□□□ -1.95
PRKDC-205ENST00000535375 FGF11Q92914 225 aa2.87□□□□□ -1.95
PRKDC-205ENST00000535375 CXorf40BQ96DE9 158 aa2.87□□□□□ -1.95
PRKDC-205ENST00000535375 FCRL1Q96LA6 429 aa2.87□□□□□ -1.95
PRKDC-205ENST00000535375 TSNARE1Q96NA8 513 aa2.87□□□□□ -1.95
PRKDC-205ENST00000535375 NT5MQ9NPB1 228 aa2.87□□□□□ -1.95
PRKDC-205ENST00000535375 DMAP1Q9NPF5 467 aaPredicted RBP2.87□□□□□ -1.95
PRKDC-205ENST00000535375 LHX9Q9NQ69 397 aa2.87□□□□□ -1.95
PRKDC-205ENST00000535375 STAP1Q9ULZ2 295 aa2.87□□□□□ -1.95
PRKDC-205ENST00000535375 TRAPPC4Q9Y296 219 aa2.87□□□□□ -1.95
PRKDC-205ENST00000535375 IQANK1A0A1B0GTG1 560 aa2.86□□□□□ -1.95
PRKDC-205ENST00000535375 CTAGE15A4D2H0 777 aa2.86□□□□□ -1.95
PRKDC-205ENST00000535375 A8MXQ7 604 aa2.86□□□□□ -1.95
PRKDC-205ENST00000535375 ERLIN1O75477 346 aa2.86□□□□□ -1.95
PRKDC-205ENST00000535375 SFTPCP11686 197 aa2.86□□□□□ -1.95
PRKDC-205ENST00000535375 ABOP16442 354 aa2.86□□□□□ -1.95
PRKDC-205ENST00000535375 IL12AP29459 219 aa2.86□□□□□ -1.95
PRKDC-205ENST00000535375 PKNOX1P55347 436 aa2.86□□□□□ -1.95
PRKDC-205ENST00000535375 PLP1P60201 277 aa2.86□□□□□ -1.95
PRKDC-205ENST00000535375 CUL2Q13617 745 aa2.86□□□□□ -1.95
PRKDC-205ENST00000535375 ATP6AP1Q15904 470 aa2.86□□□□□ -1.95
PRKDC-205ENST00000535375 BCL7AQ4VC05 210 aa2.86□□□□□ -1.95
PRKDC-205ENST00000535375 LINC00483Q53H64 154 aa2.86□□□□□ -1.95
PRKDC-205ENST00000535375 SAMD4BQ5PRF9 694 aaKnown RBP2.86□□□□□ -1.95
PRKDC-205ENST00000535375 Q6ZN92 141 aa2.86□□□□□ -1.95
PRKDC-205ENST00000535375 CTAGE6Q86UF2 777 aa2.86□□□□□ -1.95
PRKDC-205ENST00000535375 PAQR7Q86WK9 346 aa2.86□□□□□ -1.95
PRKDC-205ENST00000535375 PSTKQ8IV42 348 aaKnown RBP2.86□□□□□ -1.95
PRKDC-205ENST00000535375 LYPD1Q8N2G4 141 aa2.86□□□□□ -1.95
PRKDC-205ENST00000535375 SDR9C7Q8NEX9 313 aa2.86□□□□□ -1.95
PRKDC-205ENST00000535375 OR4K14Q8NGD5 310 aa2.86□□□□□ -1.95
PRKDC-205ENST00000535375 OR1L6Q8NGR2 347 aa2.86□□□□□ -1.95
PRKDC-205ENST00000535375 TCEANC2Q96MN5 208 aa2.86□□□□□ -1.95
PRKDC-205ENST00000535375 CNN2Q99439 309 aaKnown RBP2.86□□□□□ -1.95
PRKDC-205ENST00000535375 PLIN2Q99541 437 aa2.86□□□□□ -1.95
PRKDC-205ENST00000535375 FAIM2Q9BWQ8 316 aa2.86□□□□□ -1.95
PRKDC-205ENST00000535375 C20orf85Q9H1P6 137 aa2.86□□□□□ -1.95
PRKDC-205ENST00000535375 RBKSQ9H477 322 aa2.86□□□□□ -1.95
PRKDC-205ENST00000535375 SIAEQ9HAT2 523 aa2.86□□□□□ -1.95
PRKDC-205ENST00000535375 SLC7A8Q9UHI5 535 aa2.86□□□□□ -1.95
PRKDC-205ENST00000535375 OR5B21A6NL26 309 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 LOC110117498-PIK3R3F6TDL0 507 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 GOLGA8SH3BPF8 625 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 MBTPS2O43462 519 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 UGT1A9O60656 530 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 CIB2O75838 187 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 C1orf105O95561 183 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 TMEM50AO95807 157 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 KLK3P07288 261 aaPredicted RBP2.85□□□□□ -1.95
PRKDC-205ENST00000535375 CT62P0C5K7 136 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 TBPP20226 339 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 KITLGP21583 273 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 YAP1P46937 504 aaKnown RBP2.85□□□□□ -1.95
PRKDC-205ENST00000535375 ACTA2P62736 377 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 ACTC1P68032 377 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 SCRN3Q0VDG4 424 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 SRSF5Q13243 272 aaKnown RBP2.85□□□□□ -1.95
PRKDC-205ENST00000535375 PLD1Q13393 1074 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms