RNA–Protein interactions for RNA: ENST00000534555.5

RPS3-220, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 387 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-220ENST00000534555 NCF2P19878 526 aaPredicted RBP13.57□□□□□ -0.24
RPS3-220ENST00000534555 MAGEB1P43366 347 aa13.57□□□□□ -0.24
RPS3-220ENST00000534555 UBA52P62987 128 aaKnown RBP13.57□□□□□ -0.24
RPS3-220ENST00000534555 MVKQ03426 396 aa13.57□□□□□ -0.24
RPS3-220ENST00000534555 GKAP1Q5VSY0 366 aaPredicted RBP13.57□□□□□ -0.24
RPS3-220ENST00000534555 CARD17Q5XLA6 110 aa13.57□□□□□ -0.24
RPS3-220ENST00000534555 ACSM5Q6NUN0 579 aa13.57□□□□□ -0.24
RPS3-220ENST00000534555 SHISA2Q6UWI4 295 aa13.57□□□□□ -0.24
RPS3-220ENST00000534555 CCDC36Q8IYA8 594 aa13.57□□□□□ -0.24
RPS3-220ENST00000534555 STK35Q8TDR2 534 aa13.57□□□□□ -0.24
RPS3-220ENST00000534555 STON2Q8WXE9 905 aa13.57□□□□□ -0.24
RPS3-220ENST00000534555 OR2M2Q96R28 347 aa13.57□□□□□ -0.24
RPS3-220ENST00000534555 PANX1Q96RD7 426 aa13.57□□□□□ -0.24
RPS3-220ENST00000534555 C1QTNF5Q9BXJ0 243 aa13.57□□□□□ -0.24
RPS3-220ENST00000534555 SLC52A3Q9NQ40 469 aa13.57□□□□□ -0.24
RPS3-220ENST00000534555 CHST2Q9Y4C5 530 aa13.57□□□□□ -0.24
RPS3-220ENST00000534555 ARAFP10398 606 aa13.56□□□□□ -0.24
RPS3-220ENST00000534555 ANPEPP15144 967 aa13.56□□□□□ -0.24
RPS3-220ENST00000534555 CBLP22681 906 aa13.56□□□□□ -0.24
RPS3-220ENST00000534555 GTF2E2P29084 291 aaKnown RBP13.56□□□□□ -0.24
RPS3-220ENST00000534555 PTDSS1P48651 473 aaKnown RBP13.56□□□□□ -0.24
RPS3-220ENST00000534555 MRPL19P49406 292 aaKnown RBP13.56□□□□□ -0.24
RPS3-220ENST00000534555 POLR2JP52435 117 aaKnown RBP13.56□□□□□ -0.24
RPS3-220ENST00000534555 HOXC5Q00444 222 aa13.56□□□□□ -0.24
RPS3-220ENST00000534555 C1DQ13901 141 aaKnown RBP13.56□□□□□ -0.24
RPS3-220ENST00000534555 FXNQ16595 210 aa13.56□□□□□ -0.24
RPS3-220ENST00000534555 GSG1Q2KHT4 349 aa13.56□□□□□ -0.24
RPS3-220ENST00000534555 TRMT5Q32P41 509 aaKnown RBP13.56□□□□□ -0.24
RPS3-220ENST00000534555 LIN52Q52LA3 116 aa13.56□□□□□ -0.24
RPS3-220ENST00000534555 REP15Q6BDI9 236 aa13.56□□□□□ -0.24
RPS3-220ENST00000534555 ZNF621Q6ZSS3 439 aa13.56□□□□□ -0.24
RPS3-220ENST00000534555 MSANTD1Q6ZTZ1 278 aa13.56□□□□□ -0.24
RPS3-220ENST00000534555 SERPINA11Q86U17 422 aa13.56□□□□□ -0.24
RPS3-220ENST00000534555 TMEM123Q8N131 208 aa13.56□□□□□ -0.24
RPS3-220ENST00000534555 BPIFB2Q8N4F0 458 aa13.56□□□□□ -0.24
RPS3-220ENST00000534555 PIK3C3Q8NEB9 887 aa13.56□□□□□ -0.24
RPS3-220ENST00000534555 RNF217Q8TC41 542 aa13.56□□□□□ -0.24
RPS3-220ENST00000534555 ZNF416Q9BWM5 594 aa13.56□□□□□ -0.24
RPS3-220ENST00000534555 RMND5AQ9H871 391 aa13.56□□□□□ -0.24
RPS3-220ENST00000534555 NPHS2Q9NP85 383 aa13.56□□□□□ -0.24
RPS3-220ENST00000534555 TRIM33Q9UPN9 1127 aa13.56□□□□□ -0.24
RPS3-220ENST00000534555 ZNF443Q9Y2A4 671 aaPredicted RBP13.56□□□□□ -0.24
RPS3-220ENST00000534555 A0A096LPI6 279 aa13.55□□□□□ -0.24
RPS3-220ENST00000534555 A0A1W2PPW3 197 aa13.55□□□□□ -0.24
RPS3-220ENST00000534555 M0R082 166 aa13.55□□□□□ -0.24
RPS3-220ENST00000534555 RFXANKO14593 260 aa13.55□□□□□ -0.24
RPS3-220ENST00000534555 DEAF1O75398 565 aaPredicted RBP13.55□□□□□ -0.24
RPS3-220ENST00000534555 CLPTM1O96005 669 aa13.55□□□□□ -0.24
RPS3-220ENST00000534555 HKR1P10072 659 aa13.55□□□□□ -0.24
RPS3-220ENST00000534555 TROVE2P10155 538 aaKnown RBP eCLIP13.55□□□□□ -0.242e-58■■■■■ 40.6
RPS3-220ENST00000534555 RPS26P11Q5JNZ5 115 aaPredicted RBP13.55□□□□□ -0.24
RPS3-220ENST00000534555 TREML4Q6UXN2 200 aa13.55□□□□□ -0.24
RPS3-220ENST00000534555 ZNF813Q6ZN06 617 aa13.55□□□□□ -0.24
RPS3-220ENST00000534555 WDFY1Q8IWB7 410 aa13.55□□□□□ -0.24
RPS3-220ENST00000534555 TEX29Q8N6K0 151 aa13.55□□□□□ -0.24
RPS3-220ENST00000534555 ZNF417Q8TAU3 575 aa13.55□□□□□ -0.24
RPS3-220ENST00000534555 NANPQ8TBE9 248 aa13.55□□□□□ -0.24
RPS3-220ENST00000534555 THOC1Q96FV9 657 aaKnown RBP13.55□□□□□ -0.24
RPS3-220ENST00000534555 TSPAN32Q96QS1 320 aa13.55□□□□□ -0.24
RPS3-220ENST00000534555 ZNF587Q96SQ5 575 aaPredicted RBP13.55□□□□□ -0.24
RPS3-220ENST00000534555 EMC6Q9BV81 110 aa13.55□□□□□ -0.24
RPS3-220ENST00000534555 DDX28Q9NUL7 540 aaKnown RBP13.55□□□□□ -0.24
RPS3-220ENST00000534555 ZNF224Q9NZL3 707 aa13.55□□□□□ -0.24
RPS3-220ENST00000534555 A0A0G2JMP0 313 aa13.54□□□□□ -0.24
RPS3-220ENST00000534555 A0A0G2JND7 137 aa13.54□□□□□ -0.24
RPS3-220ENST00000534555 A0A0X1KG70 313 aa13.54□□□□□ -0.24
RPS3-220ENST00000534555 TRAF3IP2O43734 574 aaPredicted RBP13.54□□□□□ -0.24
RPS3-220ENST00000534555 VIMP08670 466 aaKnown RBP13.54□□□□□ -0.24
RPS3-220ENST00000534555 PATE4P0C8F1 98 aa13.54□□□□□ -0.24
RPS3-220ENST00000534555 HLA-DOBP13765 273 aa13.54□□□□□ -0.24
RPS3-220ENST00000534555 GIPRP48546 466 aa13.54□□□□□ -0.24
RPS3-220ENST00000534555 ANXA11P50995 505 aaKnown RBP13.54□□□□□ -0.24
RPS3-220ENST00000534555 ATP4BP51164 291 aa13.54□□□□□ -0.24
RPS3-220ENST00000534555 MRPS11P82912 194 aaKnown RBP13.54□□□□□ -0.24
RPS3-220ENST00000534555 GALK2Q01415 458 aa13.54□□□□□ -0.24
RPS3-220ENST00000534555 GUCY1A3Q02108 690 aa13.54□□□□□ -0.24
RPS3-220ENST00000534555 FOXL1Q12952 345 aa13.54□□□□□ -0.24
RPS3-220ENST00000534555 RAB39AQ14964 217 aa13.54□□□□□ -0.24
RPS3-220ENST00000534555 GLIPR1L2Q4G1C9 344 aa13.54□□□□□ -0.24
RPS3-220ENST00000534555 C20orf196Q8IYI0 205 aa13.54□□□□□ -0.24
RPS3-220ENST00000534555 OR4M2Q8NGB6 313 aa13.54□□□□□ -0.24
RPS3-220ENST00000534555 OR9I1Q8NGQ6 314 aa13.54□□□□□ -0.24
RPS3-220ENST00000534555 TAAR8Q969N4 342 aa13.54□□□□□ -0.24
RPS3-220ENST00000534555 ITCHQ96J02 903 aa13.54□□□□□ -0.24
RPS3-220ENST00000534555 DUX5Q96PT3 197 aa13.54□□□□□ -0.24
RPS3-220ENST00000534555 RABEP2Q9H5N1 569 aa13.54□□□□□ -0.24
RPS3-220ENST00000534555 TAAR3PQ9P1P4 343 aa13.54□□□□□ -0.24
RPS3-220ENST00000534555 CORINQ9Y5Q5 1042 aa13.54□□□□□ -0.24
RPS3-220ENST00000534555 DSPPQ9NZW4 1301 aa13.54□□□□□ -0.24
RPS3-220ENST00000534555 ARHGAP32A7KAX9 2087 aa13.53□□□□□ -0.24
RPS3-220ENST00000534555 MS4A18H0YCH9 400 aa13.53□□□□□ -0.24
RPS3-220ENST00000534555 AIM2O14862 343 aa13.53□□□□□ -0.24
RPS3-220ENST00000534555 PRSS23O95084 383 aa13.53□□□□□ -0.24
RPS3-220ENST00000534555 ANP32DO95626 131 aa13.53□□□□□ -0.24
RPS3-220ENST00000534555 HPRP00739 348 aa13.53□□□□□ -0.24
RPS3-220ENST00000534555 BCHEP06276 602 aa13.53□□□□□ -0.24
RPS3-220ENST00000534555 ETFAP13804 333 aa13.53□□□□□ -0.24
RPS3-220ENST00000534555 B4GALT1P15291 398 aa13.53□□□□□ -0.24
RPS3-220ENST00000534555 GRPRP30550 384 aa13.53□□□□□ -0.24
RPS3-220ENST00000534555 RAB1AP62820 205 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms