RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 ADAM30Q9UKF2 790 aa12.08□□□□□ -0.48
BEST1-208ENST00000534553 FARSAQ9Y285 508 aaKnown RBP12.08□□□□□ -0.48
BEST1-208ENST00000534553 HDGFL3Q9Y3E1 203 aa12.08□□□□□ -0.48
BEST1-208ENST00000534553 TEX51A0A1B0GUA7 166 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 CTDSP2O14595 271 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 TMEM127O75204 238 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 OCM2P0CE71 109 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 OCMP0CE72 109 aaPredicted RBP12.07□□□□□ -0.48
BEST1-208ENST00000534553 DEFA1P59665 94 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 DEFA3P59666 94 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 TLE3Q04726 772 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 SLC3A1Q07837 685 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 OXA1LQ15070 435 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 TP53I3Q53FA7 332 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 BICRALQ6AI39 1079 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 CDC20BQ86Y33 519 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 PLCZ1Q86YW0 608 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 TMEM156Q8N614 296 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 SYT14Q8NB59 555 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 RPS4Y2Q8TD47 263 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 ASB17Q8WXJ9 295 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 KIAA1143Q96AT1 154 aaPredicted RBP12.07□□□□□ -0.48
BEST1-208ENST00000534553 MFRPQ9BY79 579 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 SPRY4Q9C004 299 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 SRA1Q9HD15 236 aaKnown RBP12.07□□□□□ -0.48
BEST1-208ENST00000534553 SACM1LQ9NTJ5 587 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 FAIMQ9NVQ4 179 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 HPF1Q9NWY4 346 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 DAPK2Q9UIK4 370 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 LAMP5Q9UJQ1 280 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 SIRT4Q9Y6E7 314 aaPredicted RBP12.07□□□□□ -0.48
BEST1-208ENST00000534553 TRBV2A0A0J9YWF9 115 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 C2orf72A6NCS6 295 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 CD8B2A6NJW9 211 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 LIPT2A6NK58 231 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 E9PI62 339 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 NPIPA5E9PKD4 350 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 KRT8P05787 483 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 TFPIP10646 304 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 CD8BP10966 210 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 PTBP1P26599 531 aaKnown RBP eCLIP12.07□□□□□ -0.48
BEST1-208ENST00000534553 GDI2P50395 445 aaKnown RBP12.07□□□□□ -0.48
BEST1-208ENST00000534553 OR7A5Q15622 319 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 ZNF684Q5T5D7 378 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 METAP1DQ6UB28 335 aaPredicted RBP12.07□□□□□ -0.48
BEST1-208ENST00000534553 IL20RBQ6UXL0 311 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 PPP1R32Q7Z5V6 425 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 LSRQ86X29 649 aaPredicted RBP12.07□□□□□ -0.48
BEST1-208ENST00000534553 CT55Q8WUE5 264 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 ZNRF4Q8WWF5 429 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 THRSPQ92748 146 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 GHSRQ92847 366 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 CDCP1Q9H5V8 836 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 SP140LQ9H930 580 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 NPIPA1Q9UND3 350 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 COPS3Q9UNS2 423 aa12.07□□□□□ -0.48
BEST1-208ENST00000534553 RPH3AQ9Y2J0 694 aaPredicted RBP12.07□□□□□ -0.48
BEST1-208ENST00000534553 MPDZO75970 2070 aa12.06□□□□□ -0.48
BEST1-208ENST00000534553 TRAV1-2A0A0B4J238 106 aa12.06□□□□□ -0.48
BEST1-208ENST00000534553 SLC22A23A1A5C7 686 aa12.06□□□□□ -0.48
BEST1-208ENST00000534553 B4DXG7 233 aa12.06□□□□□ -0.48
BEST1-208ENST00000534553 SNPHO15079 494 aa12.06□□□□□ -0.48
BEST1-208ENST00000534553 MT-CO3P00414 261 aa12.06□□□□□ -0.48
BEST1-208ENST00000534553 GLO1Q04760 184 aa12.06□□□□□ -0.48
BEST1-208ENST00000534553 SF3A2Q15428 464 aaKnown RBP12.06□□□□□ -0.48
BEST1-208ENST00000534553 ZNF239Q16600 458 aaKnown RBP12.06□□□□□ -0.48
BEST1-208ENST00000534553 YIF1BQ5BJH7 314 aa12.06□□□□□ -0.48
BEST1-208ENST00000534553 SLC22A10Q63ZE4 541 aa12.06□□□□□ -0.48
BEST1-208ENST00000534553 HBMQ6B0K9 141 aa12.06□□□□□ -0.48
BEST1-208ENST00000534553 PM20D2Q8IYS1 436 aa12.06□□□□□ -0.48
BEST1-208ENST00000534553 GHDCQ8N2G8 530 aa12.06□□□□□ -0.48
BEST1-208ENST00000534553 WDSUB1Q8N9V3 476 aa12.06□□□□□ -0.48
BEST1-208ENST00000534553 POC1BQ8TC44 478 aa12.06□□□□□ -0.48
BEST1-208ENST00000534553 NTNG2Q96CW9 530 aa12.06□□□□□ -0.48
BEST1-208ENST00000534553 ADAD1Q96M93 576 aaKnown RBP12.06□□□□□ -0.48
BEST1-208ENST00000534553 TSSK2Q96PF2 358 aa12.06□□□□□ -0.48
BEST1-208ENST00000534553 TTYH2Q9BSA4 534 aa12.06□□□□□ -0.48
BEST1-208ENST00000534553 SH2D2AQ9NP31 389 aa12.06□□□□□ -0.48
BEST1-208ENST00000534553 B9D1Q9UPM9 204 aa12.06□□□□□ -0.48
BEST1-208ENST00000534553 ANKRD61A6NGH8 418 aa12.05□□□□□ -0.48
BEST1-208ENST00000534553 ZNF879B4DU55 563 aa12.05□□□□□ -0.48
BEST1-208ENST00000534553 LRRTM2O43300 516 aa12.05□□□□□ -0.48
BEST1-208ENST00000534553 SLC19A2O60779 497 aa12.05□□□□□ -0.48
BEST1-208ENST00000534553 PLGP00747 810 aaPredicted RBP12.05□□□□□ -0.48
BEST1-208ENST00000534553 SERPINA7P05543 415 aa12.05□□□□□ -0.48
BEST1-208ENST00000534553 CLEC2LP0C7M8 214 aa12.05□□□□□ -0.48
BEST1-208ENST00000534553 ZNF17P17021 662 aa12.05□□□□□ -0.48
BEST1-208ENST00000534553 EDNRAP25101 427 aa12.05□□□□□ -0.48
BEST1-208ENST00000534553 DSCR4P56555 118 aaPredicted RBP12.05□□□□□ -0.48
BEST1-208ENST00000534553 ACSM3Q53FZ2 586 aa12.05□□□□□ -0.48
BEST1-208ENST00000534553 ZNF544Q6NX49 715 aa12.05□□□□□ -0.48
BEST1-208ENST00000534553 H3F3CQ6NXT2 135 aa12.05□□□□□ -0.48
BEST1-208ENST00000534553 JMJD6Q6NYC1 403 aaPredicted RBP12.05□□□□□ -0.48
BEST1-208ENST00000534553 CEACAM19Q7Z692 300 aa12.05□□□□□ -0.48
BEST1-208ENST00000534553 LYSMD2Q8IV50 215 aa12.05□□□□□ -0.48
BEST1-208ENST00000534553 GTPBP8Q8N3Z3 284 aaPredicted RBP12.05□□□□□ -0.48
BEST1-208ENST00000534553 ZNF454Q8N9F8 522 aa12.05□□□□□ -0.48
BEST1-208ENST00000534553 ZNF511Q8NB15 262 aa12.05□□□□□ -0.48
BEST1-208ENST00000534553 OTOSQ8NHW6 89 aa12.05□□□□□ -0.48
BEST1-208ENST00000534553 TMEM41AQ96HV5 264 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms