RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 OR4D11Q8NGI4 311 aa13.41□□□□□ -0.26
CPSF1-211ENST00000533492 C10orf105Q8TEF2 133 aa13.41□□□□□ -0.26
CPSF1-211ENST00000533492 PROX1Q92786 737 aa13.41□□□□□ -0.26
CPSF1-211ENST00000533492 LRRC58Q96CX6 371 aa13.41□□□□□ -0.26
CPSF1-211ENST00000533492 MPP4Q96JB8 637 aa13.41□□□□□ -0.26
CPSF1-211ENST00000533492 ULBP2Q9BZM5 246 aa13.41□□□□□ -0.26
CPSF1-211ENST00000533492 SEC61A2Q9H9S3 476 aa13.41□□□□□ -0.26
CPSF1-211ENST00000533492 A8MV72 311 aaPredicted RBP13.4□□□□□ -0.26
CPSF1-211ENST00000533492 KIAA1324LA8MWY0 1029 aaPredicted RBP13.4□□□□□ -0.26
CPSF1-211ENST00000533492 MRASO14807 208 aa13.4□□□□□ -0.26
CPSF1-211ENST00000533492 RNF13O43567 381 aa13.4□□□□□ -0.26
CPSF1-211ENST00000533492 NPPAP01160 153 aa13.4□□□□□ -0.26
CPSF1-211ENST00000533492 HLA-HP01893 362 aa13.4□□□□□ -0.26
CPSF1-211ENST00000533492 UMPSP11172 480 aa13.4□□□□□ -0.26
CPSF1-211ENST00000533492 IFNGR1P15260 489 aa13.4□□□□□ -0.26
CPSF1-211ENST00000533492 NPR2P20594 1047 aa13.4□□□□□ -0.26
CPSF1-211ENST00000533492 CSNK1A1P48729 337 aa13.4□□□□□ -0.26
CPSF1-211ENST00000533492 PDLIM4P50479 330 aa13.4□□□□□ -0.26
CPSF1-211ENST00000533492 GZMMP51124 257 aa13.4□□□□□ -0.26
CPSF1-211ENST00000533492 BIDP55957 195 aa13.4□□□□□ -0.26
CPSF1-211ENST00000533492 PIGFQ07326 219 aa13.4□□□□□ -0.26
CPSF1-211ENST00000533492 KLF10Q13118 480 aa13.4□□□□□ -0.26
CPSF1-211ENST00000533492 CARTPTQ16568 116 aa13.4□□□□□ -0.26
CPSF1-211ENST00000533492 ZNF74Q16587 644 aa13.4□□□□□ -0.26
CPSF1-211ENST00000533492 TMEM249Q2WGJ8 235 aa13.4□□□□□ -0.26
CPSF1-211ENST00000533492 RABL3Q5HYI8 236 aa13.4□□□□□ -0.26
CPSF1-211ENST00000533492 COQ5Q5HYK3 327 aa13.4□□□□□ -0.26
CPSF1-211ENST00000533492 WDR88Q6ZMY6 472 aa13.4□□□□□ -0.26
CPSF1-211ENST00000533492 SLC35D2Q76EJ3 337 aa13.4□□□□□ -0.26
CPSF1-211ENST00000533492 CCDC80Q76M96 950 aa13.4□□□□□ -0.26
CPSF1-211ENST00000533492 PCYOX1LQ8NBM8 494 aa13.4□□□□□ -0.26
CPSF1-211ENST00000533492 NUP37Q8NFH4 326 aa13.4□□□□□ -0.26
CPSF1-211ENST00000533492 OR8J3Q8NGG0 315 aa13.4□□□□□ -0.26
CPSF1-211ENST00000533492 NANOS1Q8WY41 292 aaKnown RBP13.4□□□□□ -0.26
CPSF1-211ENST00000533492 SORCS2Q96PQ0 1159 aa13.4□□□□□ -0.26
CPSF1-211ENST00000533492 SLC19A3Q9BZV2 496 aa13.4□□□□□ -0.26
CPSF1-211ENST00000533492 FGFR1OP2Q9NVK5 253 aa13.4□□□□□ -0.26
CPSF1-211ENST00000533492 FBXO9Q9UK97 447 aaPredicted RBP13.4□□□□□ -0.26
CPSF1-211ENST00000533492 BAG5Q9UL15 447 aa13.4□□□□□ -0.26
CPSF1-211ENST00000533492 SH3GLB1Q9Y371 365 aa13.4□□□□□ -0.26
CPSF1-211ENST00000533492 IGHV2OR16-5A0A0B4J2B6 119 aa13.39□□□□□ -0.27
CPSF1-211ENST00000533492 LOC100653049A0A140TA62 436 aa13.39□□□□□ -0.27
CPSF1-211ENST00000533492 ZNF503-AS2A6NEH8 195 aa13.39□□□□□ -0.27
CPSF1-211ENST00000533492 BBIP1A8MTZ0 92 aa13.39□□□□□ -0.27
CPSF1-211ENST00000533492 KRT34O76011 436 aa13.39□□□□□ -0.27
CPSF1-211ENST00000533492 IFNA14P01570 189 aa13.39□□□□□ -0.27
CPSF1-211ENST00000533492 THY1P04216 161 aa13.39□□□□□ -0.27
CPSF1-211ENST00000533492 THBS4P35443 961 aa13.39□□□□□ -0.27
CPSF1-211ENST00000533492 HGFACQ04756 655 aa13.39□□□□□ -0.27
CPSF1-211ENST00000533492 ZP4Q12836 540 aa13.39□□□□□ -0.27
CPSF1-211ENST00000533492 DAG1Q14118 895 aa13.39□□□□□ -0.27
CPSF1-211ENST00000533492 EFNB3Q15768 340 aa13.39□□□□□ -0.27
CPSF1-211ENST00000533492 GSG1Q2KHT4 349 aa13.39□□□□□ -0.27
CPSF1-211ENST00000533492 REP15Q6BDI9 236 aa13.39□□□□□ -0.27
CPSF1-211ENST00000533492 ERICH5Q6P6B1 374 aa13.39□□□□□ -0.27
CPSF1-211ENST00000533492 NHLRC1Q6VVB1 395 aa13.39□□□□□ -0.27
CPSF1-211ENST00000533492 MYPOPQ86VE0 399 aaPredicted RBP13.39□□□□□ -0.27
CPSF1-211ENST00000533492 FOXB1Q99853 325 aa13.39□□□□□ -0.27
CPSF1-211ENST00000533492 RAB1BQ9H0U4 201 aa13.39□□□□□ -0.27
CPSF1-211ENST00000533492 PCDHAC1Q9H158 963 aa13.39□□□□□ -0.27
CPSF1-211ENST00000533492 PLK3Q9H4B4 646 aa13.39□□□□□ -0.27
CPSF1-211ENST00000533492 ZNF442Q9H7R0 627 aa13.39□□□□□ -0.27
CPSF1-211ENST00000533492 SAR1AQ9NR31 198 aa13.39□□□□□ -0.27
CPSF1-211ENST00000533492 GID8Q9NWU2 228 aa13.39□□□□□ -0.27
CPSF1-211ENST00000533492 ZNF229Q9UJW7 825 aa13.39□□□□□ -0.27
CPSF1-211ENST00000533492 ADAM21Q9UKJ8 722 aa13.39□□□□□ -0.27
CPSF1-211ENST00000533492 A0A096LNT2 108 aa13.38□□□□□ -0.27
CPSF1-211ENST00000533492 hCG_2039718K7EN88 272 aa13.38□□□□□ -0.27
CPSF1-211ENST00000533492 LYPD3O95274 346 aa13.38□□□□□ -0.27
CPSF1-211ENST00000533492 ERCC1P07992 297 aaPredicted RBP13.38□□□□□ -0.27
CPSF1-211ENST00000533492 B4GALT1P15291 398 aa13.38□□□□□ -0.27
CPSF1-211ENST00000533492 USF1P22415 310 aaPredicted RBP13.38□□□□□ -0.27
CPSF1-211ENST00000533492 TAS2R41P59536 307 aa13.38□□□□□ -0.27
CPSF1-211ENST00000533492 ZNF627Q7L945 461 aa13.38□□□□□ -0.27
CPSF1-211ENST00000533492 SPATA21Q7Z572 469 aa13.38□□□□□ -0.27
CPSF1-211ENST00000533492 CARM1Q86X55 608 aa13.38□□□□□ -0.27
CPSF1-211ENST00000533492 CALHM3Q86XJ0 350 aa13.38□□□□□ -0.27
CPSF1-211ENST00000533492 LRRC17Q8N6Y2 441 aa13.38□□□□□ -0.27
CPSF1-211ENST00000533492 ANKS4BQ8N8V4 417 aa13.38□□□□□ -0.27
CPSF1-211ENST00000533492 OR6X1Q8NH79 312 aa13.38□□□□□ -0.27
CPSF1-211ENST00000533492 ZNF566Q969W8 418 aa13.38□□□□□ -0.27
CPSF1-211ENST00000533492 PIMREGQ9BSJ6 248 aa13.38□□□□□ -0.27
CPSF1-211ENST00000533492 MYOZ1Q9NP98 299 aaPredicted RBP13.38□□□□□ -0.27
CPSF1-211ENST00000533492 B3GNT2Q9NY97 397 aa13.38□□□□□ -0.27
CPSF1-211ENST00000533492 TAS2R5Q9NYW4 299 aa13.38□□□□□ -0.27
CPSF1-211ENST00000533492 GLTPQ9NZD2 209 aa13.38□□□□□ -0.27
CPSF1-211ENST00000533492 SPEF1Q9Y4P9 236 aa13.38□□□□□ -0.27
CPSF1-211ENST00000533492 SH3PXD2BA1X283 911 aa13.37□□□□□ -0.27
CPSF1-211ENST00000533492 BLOC1S5-TXNDC5H3BN57 136 aa13.37□□□□□ -0.27
CPSF1-211ENST00000533492 FXYD1O00168 92 aa13.37□□□□□ -0.27
CPSF1-211ENST00000533492 NDUFS8O00217 210 aa13.37□□□□□ -0.27
CPSF1-211ENST00000533492 ENTPD5O75356 428 aa13.37□□□□□ -0.27
CPSF1-211ENST00000533492 RAB36O95755 333 aa13.37□□□□□ -0.27
CPSF1-211ENST00000533492 BCL10O95999 233 aa13.37□□□□□ -0.27
CPSF1-211ENST00000533492 PTDSS1P48651 473 aaKnown RBP13.37□□□□□ -0.27
CPSF1-211ENST00000533492 PPOXP50336 477 aa13.37□□□□□ -0.27
CPSF1-211ENST00000533492 CRYBA2P53672 197 aa13.37□□□□□ -0.27
CPSF1-211ENST00000533492 RAB1AP62820 205 aa13.37□□□□□ -0.27
CPSF1-211ENST00000533492 LSM11P83369 360 aaKnown RBP eCLIP13.37□□□□□ -0.27
CPSF1-211ENST00000533492 VLDLRP98155 873 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms