RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 ZCCHC23Q6ZST2 131 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 SPATC1Q76KD6 591 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 C1QL4Q86Z23 238 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 C10orf107Q8IVU9 208 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 C20orf196Q8IYI0 205 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 ANKFN1Q8N957 763 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 FNDC5Q8NAU1 212 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 OR4A15Q8NGL6 344 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 SYNPRQ8TBG9 265 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 ST7LQ8TDW4 575 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 SNX33Q8WV41 574 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 SLC25A36Q96CQ1 311 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 ELMOD3Q96FG2 381 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 MS4A7Q9GZW8 240 aaPredicted RBP6.6□□□□□ -1.35
NXF1-215ENST00000533440 SAP30LQ9HAJ7 183 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 BEX1Q9HBH7 125 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 RLIMQ9NVW2 624 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 SLCO1C1Q9NYB5 712 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 PSMC3IPQ9P2W1 217 aaPredicted RBP6.6□□□□□ -1.35
NXF1-215ENST00000533440 INSIG2Q9Y5U4 225 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 PRSS51A0A1B0GVH4 220 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 AIM2O14862 343 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 AKAP8O43823 692 aaKnown RBP6.59□□□□□ -1.35
NXF1-215ENST00000533440 TRIM13O60858 407 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 UBOX5O94941 541 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 UBL3O95164 117 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 NGFP01138 241 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 IGHMP01871 453 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 B4GALT1P15291 398 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 MAKP20794 623 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 LSP1P33241 339 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 RPS5P46782 204 aaKnown RBP6.59□□□□□ -1.35
NXF1-215ENST00000533440 MTNR1AP48039 350 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 AQP5P55064 265 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 RAG2P55895 527 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 COPZ1P61923 177 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 RELBQ01201 579 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 C1DQ13901 141 aaKnown RBP6.59□□□□□ -1.35
NXF1-215ENST00000533440 PCLAFQ15004 111 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 CHI3L2Q15782 390 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 FAM209AQ5JX71 171 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 NHLRC1Q6VVB1 395 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 ANKRD46Q86W74 232 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 RNF130Q86XS8 419 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 CADM2Q8N3J6 435 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 PAQR4Q8N4S7 273 aaPredicted RBP6.59□□□□□ -1.35
NXF1-215ENST00000533440 CCDC63Q8NA47 563 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 BHLHE22Q8NFJ8 381 aaPredicted RBP6.59□□□□□ -1.35
NXF1-215ENST00000533440 OR4F5Q8NH21 305 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 FGFBP3Q8TAT2 258 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 ZNF519Q8TB69 540 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 IFT81Q8WYA0 676 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 GTF3AQ92664 365 aaKnown RBP6.59□□□□□ -1.35
NXF1-215ENST00000533440 UBE2FQ969M7 185 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 KTI12Q96EK9 354 aaPredicted RBP6.59□□□□□ -1.35
NXF1-215ENST00000533440 FOXB1Q99853 325 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 MECRQ9BV79 373 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 DPY30Q9C005 99 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 PRDM13Q9H4Q3 707 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 DECR2Q9NUI1 292 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 ASIC5Q9NY37 505 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 UBAP1Q9NZ09 502 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 MARCOQ9UEW3 520 aaPredicted RBP6.59□□□□□ -1.35
NXF1-215ENST00000533440 TBK1Q9UHD2 729 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 POFUT2Q9Y2G5 429 aa6.59□□□□□ -1.35
NXF1-215ENST00000533440 SOX21Q9Y651 276 aaPredicted RBP6.59□□□□□ -1.35
NXF1-215ENST00000533440 CLPSL1A2RUU4 121 aa6.58□□□□□ -1.36
NXF1-215ENST00000533440 FAM181BA6NEQ2 426 aa6.58□□□□□ -1.36
NXF1-215ENST00000533440 A8MXK9 166 aa6.58□□□□□ -1.36
NXF1-215ENST00000533440 MS4A18H0YCH9 400 aa6.58□□□□□ -1.36
NXF1-215ENST00000533440 M0R082 166 aa6.58□□□□□ -1.36
NXF1-215ENST00000533440 TM9SF1O15321 606 aa6.58□□□□□ -1.36
NXF1-215ENST00000533440 RIPK2O43353 540 aa6.58□□□□□ -1.36
NXF1-215ENST00000533440 TPD52L2O43399 206 aaKnown RBP6.58□□□□□ -1.36
NXF1-215ENST00000533440 ZNF500O60304 480 aaPredicted RBP6.58□□□□□ -1.36
NXF1-215ENST00000533440 NPHS1O60500 1241 aa6.58□□□□□ -1.36
NXF1-215ENST00000533440 NDUFA7O95182 113 aa6.58□□□□□ -1.36
NXF1-215ENST00000533440 CPSF4O95639 269 aaKnown RBP6.58□□□□□ -1.36
NXF1-215ENST00000533440 SNAP29O95721 258 aa6.58□□□□□ -1.36
NXF1-215ENST00000533440 PLATP00750 562 aa6.58□□□□□ -1.36
NXF1-215ENST00000533440 IGHV3-13P01766 116 aa6.58□□□□□ -1.36
NXF1-215ENST00000533440 PATE4P0C8F1 98 aa6.58□□□□□ -1.36
NXF1-215ENST00000533440 FAM157BP0CG42 384 aa6.58□□□□□ -1.36
NXF1-215ENST00000533440 PPIAL4GP0DN37 164 aa6.58□□□□□ -1.36
NXF1-215ENST00000533440 IGHV4-38-2P0DP08 117 aa6.58□□□□□ -1.36
NXF1-215ENST00000533440 PRG2P13727 222 aa6.58□□□□□ -1.36
NXF1-215ENST00000533440 SELEP16581 610 aa6.58□□□□□ -1.36
NXF1-215ENST00000533440 GTF2E2P29084 291 aaKnown RBP6.58□□□□□ -1.36
NXF1-215ENST00000533440 ARRB2P32121 409 aa6.58□□□□□ -1.36
NXF1-215ENST00000533440 SLC6A9P48067 706 aa6.58□□□□□ -1.36
NXF1-215ENST00000533440 MMP16P51512 607 aa6.58□□□□□ -1.36
NXF1-215ENST00000533440 ERVS71-1P61550 626 aa6.58□□□□□ -1.36
NXF1-215ENST00000533440 TXNL4AP83876 142 aaKnown RBP6.58□□□□□ -1.36
NXF1-215ENST00000533440 EMX2Q04743 252 aa6.58□□□□□ -1.36
NXF1-215ENST00000533440 PAX8Q06710 450 aa6.58□□□□□ -1.36
NXF1-215ENST00000533440 SLC3A1Q07837 685 aa6.58□□□□□ -1.36
NXF1-215ENST00000533440 CAMK2DQ13557 499 aa6.58□□□□□ -1.36
NXF1-215ENST00000533440 CASP8Q14790 479 aa6.58□□□□□ -1.36
NXF1-215ENST00000533440 MAPK11Q15759 364 aa6.58□□□□□ -1.36
NXF1-215ENST00000533440 MOGQ16653 247 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms