RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 ZER1Q7Z7L7 766 aa10.54□□□□□ -0.72
SSBP3-214ENST00000533209 C20orf196Q8IYI0 205 aa10.54□□□□□ -0.72
SSBP3-214ENST00000533209 GPR137CQ8N3F9 429 aa10.54□□□□□ -0.72
SSBP3-214ENST00000533209 PAPD5Q8NDF8 572 aaKnown RBP10.54□□□□□ -0.72
SSBP3-214ENST00000533209 OR6X1Q8NH79 312 aa10.54□□□□□ -0.72
SSBP3-214ENST00000533209 SLCO4A1Q96BD0 722 aa10.54□□□□□ -0.72
SSBP3-214ENST00000533209 ZC3HAV1LQ96H79 300 aaKnown RBP10.54□□□□□ -0.72
SSBP3-214ENST00000533209 ADAD1Q96M93 576 aaKnown RBP10.54□□□□□ -0.72
SSBP3-214ENST00000533209 MUS81Q96NY9 551 aa10.54□□□□□ -0.72
SSBP3-214ENST00000533209 USB1Q9BQ65 265 aaKnown RBP10.54□□□□□ -0.72
SSBP3-214ENST00000533209 GPR35Q9HC97 309 aa10.54□□□□□ -0.72
SSBP3-214ENST00000533209 CCM2LQ9NUG4 571 aaPredicted RBP10.54□□□□□ -0.72
SSBP3-214ENST00000533209 TMCC3Q9ULS5 477 aa10.54□□□□□ -0.72
SSBP3-214ENST00000533209 SIGLEC7Q9Y286 467 aa10.54□□□□□ -0.72
SSBP3-214ENST00000533209 A0A1W2PRG6 482 aa10.53□□□□□ -0.72
SSBP3-214ENST00000533209 CIB4A0PJX0 185 aa10.53□□□□□ -0.72
SSBP3-214ENST00000533209 UNC119BA6NIH7 251 aa10.53□□□□□ -0.72
SSBP3-214ENST00000533209 NPIPB13A6NJU9 1138 aa10.53□□□□□ -0.72
SSBP3-214ENST00000533209 OR5H1A6NKK0 313 aa10.53□□□□□ -0.72
SSBP3-214ENST00000533209 DEFB108AA8MXU0 73 aa10.53□□□□□ -0.72
SSBP3-214ENST00000533209 NPIPB4C9JG80 1138 aa10.53□□□□□ -0.72
SSBP3-214ENST00000533209 M0R3G1 203 aa10.53□□□□□ -0.72
SSBP3-214ENST00000533209 CASKO14936 926 aa10.53□□□□□ -0.72
SSBP3-214ENST00000533209 OR10H3O60404 316 aa10.53□□□□□ -0.72
SSBP3-214ENST00000533209 FKBP6O75344 327 aa10.53□□□□□ -0.72
SSBP3-214ENST00000533209 CTAG2O75638 210 aa10.53□□□□□ -0.72
SSBP3-214ENST00000533209 CST1P01037 141 aa10.53□□□□□ -0.72
SSBP3-214ENST00000533209 IGHMP01871 453 aa10.53□□□□□ -0.72
SSBP3-214ENST00000533209 HOXB6P17509 224 aaKnown RBP10.53□□□□□ -0.72
SSBP3-214ENST00000533209 CRYGSP22914 178 aa10.53□□□□□ -0.72
SSBP3-214ENST00000533209 FXYD6P3P58550 94 aa10.53□□□□□ -0.72
SSBP3-214ENST00000533209 ROR2Q01974 943 aaKnown RBP10.53□□□□□ -0.72
SSBP3-214ENST00000533209 RUNX1T1Q06455 604 aa10.53□□□□□ -0.72
SSBP3-214ENST00000533209 ACKR1Q16570 336 aa10.53□□□□□ -0.72
SSBP3-214ENST00000533209 TIMM23BQ5SRD1 257 aa10.53□□□□□ -0.72
SSBP3-214ENST00000533209 ARMC4Q5T2S8 1044 aa10.53□□□□□ -0.72
SSBP3-214ENST00000533209 C1orf146Q5VVC0 180 aa10.53□□□□□ -0.72
SSBP3-214ENST00000533209 OR7E24Q6IFN5 339 aa10.53□□□□□ -0.72
SSBP3-214ENST00000533209 ZNF770Q6IQ21 691 aaPredicted RBP10.53□□□□□ -0.72
SSBP3-214ENST00000533209 SEZ6L2Q6UXD5 910 aa10.53□□□□□ -0.72
SSBP3-214ENST00000533209 IGFN1Q86VF2 1251 aa10.53□□□□□ -0.72
SSBP3-214ENST00000533209 C1orf162Q8NEQ5 155 aaPredicted RBP10.53□□□□□ -0.72
SSBP3-214ENST00000533209 ASB10Q8WXI3 467 aa10.53□□□□□ -0.72
SSBP3-214ENST00000533209 HSD17B8Q92506 261 aa10.53□□□□□ -0.72
SSBP3-214ENST00000533209 TMEM54Q969K7 222 aa10.53□□□□□ -0.72
SSBP3-214ENST00000533209 ZNF837Q96EG3 531 aaPredicted RBP10.53□□□□□ -0.72
SSBP3-214ENST00000533209 SLC25A44Q96H78 314 aaPredicted RBP10.53□□□□□ -0.72
SSBP3-214ENST00000533209 BOD1Q96IK1 185 aa10.53□□□□□ -0.72
SSBP3-214ENST00000533209 RSRC1Q96IZ7 334 aaKnown RBP10.53□□□□□ -0.72
SSBP3-214ENST00000533209 TXNIPQ9H3M7 391 aa10.53□□□□□ -0.72
SSBP3-214ENST00000533209 KRCC1Q9NPI7 259 aaPredicted RBP10.53□□□□□ -0.72
SSBP3-214ENST00000533209 ZNF226Q9NYT6 803 aa10.53□□□□□ -0.72
SSBP3-214ENST00000533209 NBPF19A0A087WUL8 3843 aa10.52□□□□□ -0.73
SSBP3-214ENST00000533209 MCIDASD6RGH6 385 aa10.52□□□□□ -0.73
SSBP3-214ENST00000533209 GOSR1O95249 250 aa10.52□□□□□ -0.73
SSBP3-214ENST00000533209 PGA4P0DJD7 388 aa10.52□□□□□ -0.73
SSBP3-214ENST00000533209 PGA3P0DJD8 388 aa10.52□□□□□ -0.73
SSBP3-214ENST00000533209 CDH2P19022 906 aaPredicted RBP10.52□□□□□ -0.73
SSBP3-214ENST00000533209 FPR3P25089 353 aa10.52□□□□□ -0.73
SSBP3-214ENST00000533209 LOXP28300 417 aaPredicted RBP10.52□□□□□ -0.73
SSBP3-214ENST00000533209 GSSP48637 474 aa10.52□□□□□ -0.73
SSBP3-214ENST00000533209 CSNK1A1P48729 337 aa10.52□□□□□ -0.73
SSBP3-214ENST00000533209 DAP3P51398 398 aaKnown RBP10.52□□□□□ -0.73
SSBP3-214ENST00000533209 CTXN1P60606 82 aa10.52□□□□□ -0.73
SSBP3-214ENST00000533209 PRPS1P60891 318 aa10.52□□□□□ -0.73
SSBP3-214ENST00000533209 RPL27P61353 136 aaKnown RBP10.52□□□□□ -0.73
SSBP3-214ENST00000533209 TGFBR3Q03167 851 aa10.52□□□□□ -0.73
SSBP3-214ENST00000533209 CCNIQ14094 377 aa10.52□□□□□ -0.73
SSBP3-214ENST00000533209 TAF11Q15544 211 aa10.52□□□□□ -0.73
SSBP3-214ENST00000533209 STK11Q15831 433 aa10.52□□□□□ -0.73
SSBP3-214ENST00000533209 CEACAM16Q2WEN9 425 aa10.52□□□□□ -0.73
SSBP3-214ENST00000533209 HMBOX1Q6NT76 420 aa10.52□□□□□ -0.73
SSBP3-214ENST00000533209 C1orf94Q6P1W5 598 aa10.52□□□□□ -0.73
SSBP3-214ENST00000533209 PGBD2Q6P3X8 592 aa10.52□□□□□ -0.73
SSBP3-214ENST00000533209 P2RY8Q86VZ1 359 aa10.52□□□□□ -0.73
SSBP3-214ENST00000533209 WFDC8Q8IUA0 241 aa10.52□□□□□ -0.73
SSBP3-214ENST00000533209 LINC00471Q8N535 108 aa10.52□□□□□ -0.73
SSBP3-214ENST00000533209 WDR31Q8NA23 367 aa10.52□□□□□ -0.73
SSBP3-214ENST00000533209 OR9Q2Q8NGE9 314 aa10.52□□□□□ -0.73
SSBP3-214ENST00000533209 OR1K1Q8NGR3 316 aa10.52□□□□□ -0.73
SSBP3-214ENST00000533209 OR6N1Q8NGY5 312 aa10.52□□□□□ -0.73
SSBP3-214ENST00000533209 GNPDA2Q8TDQ7 276 aa10.52□□□□□ -0.73
SSBP3-214ENST00000533209 BCL2L2Q92843 193 aaPredicted RBP10.52□□□□□ -0.73
SSBP3-214ENST00000533209 ZNF566Q969W8 418 aa10.52□□□□□ -0.73
SSBP3-214ENST00000533209 MRPL13Q9BYD1 178 aaKnown RBP10.52□□□□□ -0.73
SSBP3-214ENST00000533209 REEP1Q9H902 201 aa10.52□□□□□ -0.73
SSBP3-214ENST00000533209 CRLF2Q9HC73 371 aa10.52□□□□□ -0.73
SSBP3-214ENST00000533209 SLC17A5Q9NRA2 495 aa10.52□□□□□ -0.73
SSBP3-214ENST00000533209 RASSF1Q9NS23 344 aa10.52□□□□□ -0.73
SSBP3-214ENST00000533209 GLTPQ9NZD2 209 aa10.52□□□□□ -0.73
SSBP3-214ENST00000533209 ZNF346Q9UL40 294 aaKnown RBP10.52□□□□□ -0.73
SSBP3-214ENST00000533209 SAMHD1Q9Y3Z3 626 aaKnown RBP10.52□□□□□ -0.73
SSBP3-214ENST00000533209 U3KQV3 271 aa10.52□□□□□ -0.73
SSBP3-214ENST00000533209 HRNRQ86YZ3 2850 aaPredicted RBP10.52□□□□□ -0.73
SSBP3-214ENST00000533209 PRR14LQ5THK1 2151 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 A0A1W2PR80 420 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 CENPBD1B2RD01 187 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 TRMUO75648 421 aaKnown RBP10.51□□□□□ -0.73
SSBP3-214ENST00000533209 CIB2O75838 187 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 CCNB2O95067 398 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms