RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 SERPINI2O75830 405 aa16.6■□□□□ 0.25
SMPD1-208ENST00000533123 SULT1C4O75897 302 aa16.6■□□□□ 0.25
SMPD1-208ENST00000533123 LIMS3P0CW19 117 aa16.6■□□□□ 0.25
SMPD1-208ENST00000533123 LIMS4P0CW20 117 aa16.6■□□□□ 0.25
SMPD1-208ENST00000533123 ATP6V1E1P36543 226 aa16.6■□□□□ 0.25
SMPD1-208ENST00000533123 BCAP31P51572 246 aa16.6■□□□□ 0.25
SMPD1-208ENST00000533123 RPS7P62081 194 aaKnown RBP16.6■□□□□ 0.25
SMPD1-208ENST00000533123 C3orf33Q6P1S2 294 aa16.6■□□□□ 0.25
SMPD1-208ENST00000533123 LHFPL3Q86UP9 236 aa16.6■□□□□ 0.25
SMPD1-208ENST00000533123 SLC22A16Q86VW1 577 aa16.6■□□□□ 0.25
SMPD1-208ENST00000533123 FAM98AQ8NCA5 519 aaKnown RBP16.6■□□□□ 0.25
SMPD1-208ENST00000533123 OR2B2Q9GZK3 357 aa16.6■□□□□ 0.25
SMPD1-208ENST00000533123 OR51E2Q9H255 320 aa16.6■□□□□ 0.25
SMPD1-208ENST00000533123 ZMIZ1Q9ULJ6 1067 aa16.6■□□□□ 0.25
SMPD1-208ENST00000533123 MRPS18CQ9Y3D5 142 aaKnown RBP16.6■□□□□ 0.25
SMPD1-208ENST00000533123 ITPR1Q14643 2758 aa16.6■□□□□ 0.25
SMPD1-208ENST00000533123 ZNF208O43345 1280 aa16.6■□□□□ 0.25
SMPD1-208ENST00000533123 AIREO43918 545 aa16.6■□□□□ 0.25
SMPD1-208ENST00000533123 BGLAPP02818 100 aa16.6■□□□□ 0.25
SMPD1-208ENST00000533123 F13BP05160 661 aa16.6■□□□□ 0.25
SMPD1-208ENST00000533123 HPNP05981 417 aa16.6■□□□□ 0.25
SMPD1-208ENST00000533123 TFPIP10646 304 aa16.6■□□□□ 0.25
SMPD1-208ENST00000533123 ZNF17P17021 662 aa16.6■□□□□ 0.25
SMPD1-208ENST00000533123 SLC2A5P22732 501 aa16.6■□□□□ 0.25
SMPD1-208ENST00000533123 UQCRC1P31930 480 aa16.6■□□□□ 0.25
SMPD1-208ENST00000533123 SFTPDP35247 375 aa16.6■□□□□ 0.25
SMPD1-208ENST00000533123 PRPS1P60891 318 aa16.6■□□□□ 0.25
SMPD1-208ENST00000533123 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.6■□□□□ 0.25
SMPD1-208ENST00000533123 GLYR1Q49A26 553 aaPredicted RBP16.6■□□□□ 0.25
SMPD1-208ENST00000533123 C1orf140Q5VVS0 124 aa16.6■□□□□ 0.25
SMPD1-208ENST00000533123 LRRC75AQ8NAA5 344 aa16.6■□□□□ 0.25
SMPD1-208ENST00000533123 ZPLD1Q8TCW7 415 aa16.6■□□□□ 0.25
SMPD1-208ENST00000533123 LUZP4Q9P127 313 aa16.6■□□□□ 0.25
SMPD1-208ENST00000533123 B3GNT3Q9Y2A9 372 aa16.6■□□□□ 0.25
SMPD1-208ENST00000533123 EXOGQ9Y2C4 368 aaKnown RBP16.6■□□□□ 0.25
SMPD1-208ENST00000533123 NBEAQ8NFP9 2946 aa16.59■□□□□ 0.25
SMPD1-208ENST00000533123 TRAV36DV7A0A075B6V5 113 aa16.59■□□□□ 0.25
SMPD1-208ENST00000533123 HTR3EA5X5Y0 456 aa16.59■□□□□ 0.25
SMPD1-208ENST00000533123 ACOT7O00154 380 aa16.59■□□□□ 0.25
SMPD1-208ENST00000533123 BCL10O95999 233 aa16.59■□□□□ 0.25
SMPD1-208ENST00000533123 IFNGP01579 166 aa16.59■□□□□ 0.25
SMPD1-208ENST00000533123 SHC1P29353 583 aa16.59■□□□□ 0.25
SMPD1-208ENST00000533123 RPL18Q07020 188 aaKnown RBP16.59■□□□□ 0.25
SMPD1-208ENST00000533123 C19orf57Q0VDD7 668 aa16.59■□□□□ 0.25
SMPD1-208ENST00000533123 SELENBP1Q13228 472 aa16.59■□□□□ 0.25
SMPD1-208ENST00000533123 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.59■□□□□ 0.25
SMPD1-208ENST00000533123 NANOGNBQ7Z5D8 188 aa16.59■□□□□ 0.25
SMPD1-208ENST00000533123 ATCAYQ86WG3 371 aa16.59■□□□□ 0.25
SMPD1-208ENST00000533123 STK35Q8TDR2 534 aa16.59■□□□□ 0.25
SMPD1-208ENST00000533123 SMPDL3BQ92485 455 aa16.59■□□□□ 0.25
SMPD1-208ENST00000533123 SLC25A36Q96CQ1 311 aa16.59■□□□□ 0.25
SMPD1-208ENST00000533123 DDIT4LQ96D03 193 aa16.59■□□□□ 0.25
SMPD1-208ENST00000533123 SFXN2Q96NB2 322 aa16.59■□□□□ 0.25
SMPD1-208ENST00000533123 GPX7Q96SL4 187 aaPredicted RBP16.59■□□□□ 0.25
SMPD1-208ENST00000533123 NMNAT3Q96T66 252 aa16.59■□□□□ 0.25
SMPD1-208ENST00000533123 SLC6A5Q9Y345 797 aa16.59■□□□□ 0.25
SMPD1-208ENST00000533123 LOC100506127A0A0U1RQW1 187 aa16.58■□□□□ 0.25
SMPD1-208ENST00000533123 SCG5P05408 212 aa16.58■□□□□ 0.25
SMPD1-208ENST00000533123 MRPL3P09001 348 aaKnown RBP16.58■□□□□ 0.25
SMPD1-208ENST00000533123 MAP2K6P52564 334 aa16.58■□□□□ 0.25
SMPD1-208ENST00000533123 TMEM176BQ3YBM2 270 aaPredicted RBP16.58■□□□□ 0.25
SMPD1-208ENST00000533123 PLEKHN1Q494U1 663 aaPredicted RBP16.58■□□□□ 0.25
SMPD1-208ENST00000533123 ALG10Q5BKT4 473 aa16.58■□□□□ 0.25
SMPD1-208ENST00000533123 FAM109AQ8N4B1 249 aa16.58■□□□□ 0.25
SMPD1-208ENST00000533123 GATAD2BQ8WXI9 593 aa16.58■□□□□ 0.25
SMPD1-208ENST00000533123 TEAD3Q99594 435 aa16.58■□□□□ 0.25
SMPD1-208ENST00000533123 BCL7BQ9BQE9 202 aa16.58■□□□□ 0.25
SMPD1-208ENST00000533123 NEURL2Q9BR09 285 aa16.58■□□□□ 0.25
SMPD1-208ENST00000533123 DEFB127Q9H1M4 99 aa16.58■□□□□ 0.25
SMPD1-208ENST00000533123 SLC6A15Q9H2J7 730 aa16.58■□□□□ 0.25
SMPD1-208ENST00000533123 RNF167Q9H6Y7 350 aa16.58■□□□□ 0.25
SMPD1-208ENST00000533123 FKRPQ9H9S5 495 aa16.58■□□□□ 0.25
SMPD1-208ENST00000533123 TMEM165Q9HC07 324 aa16.58■□□□□ 0.25
SMPD1-208ENST00000533123 TNFRSF10DQ9UBN6 386 aa16.58■□□□□ 0.25
SMPD1-208ENST00000533123 ZNF229Q9UJW7 825 aa16.58■□□□□ 0.25
SMPD1-208ENST00000533123 EXOSC1Q9Y3B2 195 aaKnown RBP16.58■□□□□ 0.25
SMPD1-208ENST00000533123 SPIN1Q9Y657 262 aaPredicted RBP16.58■□□□□ 0.25
SMPD1-208ENST00000533123 TEX13CA0A0J9YWL9 993 aa16.58■□□□□ 0.24
SMPD1-208ENST00000533123 J3QRE1 110 aa16.58■□□□□ 0.24
SMPD1-208ENST00000533123 CCRL2O00421 344 aa16.58■□□□□ 0.24
SMPD1-208ENST00000533123 SLC22A1O15245 554 aa16.58■□□□□ 0.24
SMPD1-208ENST00000533123 IGHA1P01876 353 aa16.58■□□□□ 0.24
SMPD1-208ENST00000533123 ZNF24P17028 368 aa16.58■□□□□ 0.24
SMPD1-208ENST00000533123 C1DQ13901 141 aaKnown RBP16.58■□□□□ 0.24
SMPD1-208ENST00000533123 SLC10A1Q14973 349 aa16.58■□□□□ 0.24
SMPD1-208ENST00000533123 OR51L1Q8NGJ5 315 aa16.58■□□□□ 0.24
SMPD1-208ENST00000533123 SMAP2Q8WU79 429 aaPredicted RBP16.58■□□□□ 0.24
SMPD1-208ENST00000533123 Q96M85 177 aa16.58■□□□□ 0.24
SMPD1-208ENST00000533123 ZNF649Q9BS31 505 aa16.58■□□□□ 0.24
SMPD1-208ENST00000533123 TSPAN10Q9H1Z9 355 aaPredicted RBP16.58■□□□□ 0.24
SMPD1-208ENST00000533123 PRORYQ9H606 182 aa16.58■□□□□ 0.24
SMPD1-208ENST00000533123 A0A1W2PNR3 127 aa16.57■□□□□ 0.24
SMPD1-208ENST00000533123 TMEM129A0AVI4 362 aa16.57■□□□□ 0.24
SMPD1-208ENST00000533123 ARPC3O15145 178 aa16.57■□□□□ 0.24
SMPD1-208ENST00000533123 AHSA1O95433 338 aa16.57■□□□□ 0.24
SMPD1-208ENST00000533123 PAICSP22234 425 aaKnown RBP16.57■□□□□ 0.24
SMPD1-208ENST00000533123 STARP49675 285 aa16.57■□□□□ 0.24
SMPD1-208ENST00000533123 GFRA1P56159 465 aa16.57■□□□□ 0.24
SMPD1-208ENST00000533123 WNT4P56705 351 aa16.57■□□□□ 0.24
SMPD1-208ENST00000533123 RPS3AP61247 264 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms