RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 DNAJC13O75165 2243 aa19.61■□□□□ 0.73
PACSIN3-209ENST00000532457 EFCAB10A6NFE3 127 aa19.61■□□□□ 0.73
PACSIN3-209ENST00000532457 A6NHS1 94 aa19.61■□□□□ 0.73
PACSIN3-209ENST00000532457 IGHMP01871 453 aa19.61■□□□□ 0.73
PACSIN3-209ENST00000532457 ACVR1BP36896 505 aa19.61■□□□□ 0.73
PACSIN3-209ENST00000532457 MTNR1AP48039 350 aa19.61■□□□□ 0.73
PACSIN3-209ENST00000532457 ALDH3B2P48448 385 aa19.61■□□□□ 0.73
PACSIN3-209ENST00000532457 KRR1Q13601 381 aaKnown RBP19.61■□□□□ 0.73
PACSIN3-209ENST00000532457 KLHL12Q53G59 568 aa19.61■□□□□ 0.73
PACSIN3-209ENST00000532457 EMC4Q5J8M3 183 aa19.61■□□□□ 0.73
PACSIN3-209ENST00000532457 SHFQ7M4L6 423 aa19.61■□□□□ 0.73
PACSIN3-209ENST00000532457 ADPRHL1Q8NDY3 354 aa19.61■□□□□ 0.73
PACSIN3-209ENST00000532457 OR51L1Q8NGJ5 315 aa19.61■□□□□ 0.73
PACSIN3-209ENST00000532457 OR52I1Q8NGK6 324 aa19.61■□□□□ 0.73
PACSIN3-209ENST00000532457 MYDGFQ969H8 173 aa19.61■□□□□ 0.73
PACSIN3-209ENST00000532457 MED29Q9NX70 200 aa19.61■□□□□ 0.73
PACSIN3-209ENST00000532457 QPCTLQ9NXS2 382 aa19.61■□□□□ 0.73
PACSIN3-209ENST00000532457 H2AFY2Q9P0M6 372 aaPredicted RBP19.61■□□□□ 0.73
PACSIN3-209ENST00000532457 TNFRSF10DQ9UBN6 386 aa19.61■□□□□ 0.73
PACSIN3-209ENST00000532457 A0A1W2PNV4 684 aa19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 GJE1A6NN92 205 aa19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 DCTN6O00399 190 aa19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 ARHGEF9O43307 516 aa19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 PIPP12273 146 aaPredicted RBP19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 RPL5P46777 297 aaKnown RBP19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 AGFG1P52594 562 aaKnown RBP19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 CLDN18P56856 261 aa19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 CARD18P57730 90 aa19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 HSF1Q00613 529 aa19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 POU3F1Q03052 451 aaPredicted RBP19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 HBMQ6B0K9 141 aa19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 SATL1Q86VE3 508 aa19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 STX19Q8N4C7 294 aa19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 CXCL13O43927 109 aa19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 ATRXP46100 2492 aa19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 NR1H2P55055 460 aa19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 RAC3P60763 192 aa19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 IRF3Q14653 427 aa19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 NEDD8Q15843 81 aa19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 GTF2IRD2BQ6EKJ0 949 aa19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 TMEM225Q6GV28 225 aa19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 ESPNLQ6ZVH7 1005 aa19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 SLC35D2Q76EJ3 337 aa19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 GTF2IRD2Q86UP8 949 aa19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 OR4F15Q8NGB8 312 aa19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 OR10D3Q8NH80 312 aa19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 OR2V1Q8NHB1 315 aa19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 RFKQ969G6 155 aa19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 SPENQ96T58 3664 aaKnown RBP19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 CCNB1IP1Q9NPC3 277 aa19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 KLHL13Q9P2N7 655 aa19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 PCDHGB1Q9Y5G3 927 aa19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 COMMD3-BMI1R4GMX3 469 aa19.6■□□□□ 0.73
PACSIN3-209ENST00000532457 A0A1W2PRG6 482 aa19.59■□□□□ 0.73
PACSIN3-209ENST00000532457 FAM171A2A8MVW0 826 aa19.59■□□□□ 0.73
PACSIN3-209ENST00000532457 LINC01387J3KSC0 135 aa19.59■□□□□ 0.73
PACSIN3-209ENST00000532457 DOC2BQ14184 412 aa19.59■□□□□ 0.73
PACSIN3-209ENST00000532457 B3GNT6Q6ZMB0 384 aa19.59■□□□□ 0.73
PACSIN3-209ENST00000532457 GPAT4Q86UL3 456 aa19.59■□□□□ 0.73
PACSIN3-209ENST00000532457 JAZF1Q86VZ6 243 aa19.59■□□□□ 0.73
PACSIN3-209ENST00000532457 ASB10Q8WXI3 467 aa19.59■□□□□ 0.73
PACSIN3-209ENST00000532457 DTNBP1Q96EV8 351 aa19.59■□□□□ 0.73
PACSIN3-209ENST00000532457 ZNF845Q96IR2 970 aaPredicted RBP19.59■□□□□ 0.73
PACSIN3-209ENST00000532457 OXGR1Q96P68 337 aa19.59■□□□□ 0.73
PACSIN3-209ENST00000532457 TAAR6Q96RI8 345 aa19.59■□□□□ 0.73
PACSIN3-209ENST00000532457 EMC6Q9BV81 110 aa19.59■□□□□ 0.73
PACSIN3-209ENST00000532457 NDEL1Q9GZM8 345 aa19.59■□□□□ 0.73
PACSIN3-209ENST00000532457 TSPAN10Q9H1Z9 355 aaPredicted RBP19.59■□□□□ 0.73
PACSIN3-209ENST00000532457 RPRD1BQ9NQG5 326 aaKnown RBP19.59■□□□□ 0.73
PACSIN3-209ENST00000532457 CLEC2DQ9UHP7 191 aa19.59■□□□□ 0.73
PACSIN3-209ENST00000532457 SMG1Q96Q15 3661 aaKnown RBP19.59■□□□□ 0.73
PACSIN3-209ENST00000532457 SPTA1P02549 2419 aa19.59■□□□□ 0.73
PACSIN3-209ENST00000532457 SMAD9O15198 467 aaKnown RBP19.58■□□□□ 0.73
PACSIN3-209ENST00000532457 FADS2O95864 444 aaKnown RBP19.58■□□□□ 0.73
PACSIN3-209ENST00000532457 SPI1P17947 270 aa19.58■□□□□ 0.73
PACSIN3-209ENST00000532457 GSTT1P30711 240 aa19.58■□□□□ 0.73
PACSIN3-209ENST00000532457 CSNK2A1P68400 391 aaPredicted RBP19.58■□□□□ 0.73
PACSIN3-209ENST00000532457 SRYQ05066 204 aa19.58■□□□□ 0.73
PACSIN3-209ENST00000532457 GID4Q8IVV7 300 aa19.58■□□□□ 0.73
PACSIN3-209ENST00000532457 PM20D2Q8IYS1 436 aa19.58■□□□□ 0.73
PACSIN3-209ENST00000532457 OR6V1Q8N148 313 aa19.58■□□□□ 0.73
PACSIN3-209ENST00000532457 NEIL3Q8TAT5 605 aa19.58■□□□□ 0.73
PACSIN3-209ENST00000532457 SMAP2Q8WU79 429 aaPredicted RBP19.58■□□□□ 0.73
PACSIN3-209ENST00000532457 FAR1Q8WVX9 515 aa19.58■□□□□ 0.73
PACSIN3-209ENST00000532457 ABTB1Q969K4 478 aaPredicted RBP19.58■□□□□ 0.73
PACSIN3-209ENST00000532457 TMEM80Q96HE8 168 aa19.58■□□□□ 0.73
PACSIN3-209ENST00000532457 SRA1Q9HD15 236 aaKnown RBP19.58■□□□□ 0.73
PACSIN3-209ENST00000532457 EXOGQ9Y2C4 368 aaKnown RBP19.58■□□□□ 0.73
PACSIN3-209ENST00000532457 SNX5Q9Y5X3 404 aa19.58■□□□□ 0.73
PACSIN3-209ENST00000532457 LOC102725191A0A1B0GVB3 256 aa19.58■□□□□ 0.72
PACSIN3-209ENST00000532457 J3QRE1 110 aa19.58■□□□□ 0.72
PACSIN3-209ENST00000532457 TRAF3IP2O43734 574 aaPredicted RBP19.58■□□□□ 0.72
PACSIN3-209ENST00000532457 MRPS14O60783 128 aaKnown RBP19.58■□□□□ 0.72
PACSIN3-209ENST00000532457 INMTO95050 263 aa19.58■□□□□ 0.72
PACSIN3-209ENST00000532457 BCL10O95999 233 aa19.58■□□□□ 0.72
PACSIN3-209ENST00000532457 ZNF708P17019 499 aa19.58■□□□□ 0.72
PACSIN3-209ENST00000532457 JUNBP17275 347 aaPredicted RBP19.58■□□□□ 0.72
PACSIN3-209ENST00000532457 PAICSP22234 425 aaKnown RBP19.58■□□□□ 0.72
PACSIN3-209ENST00000532457 PYCR1P32322 319 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms