RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-222	ENST00000531967	SSBP2	P81877	361 aa	Predicted RBP	4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	CDKL1	Q00532	357 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	GTDC1	Q4AE62	458 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	HACD4	Q5VWC8	232 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	SYPL2	Q5VXT5	272 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	MEDAG	Q5VYS4	303 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	PLPP4	Q5VZY2	271 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	KIAA0895L	Q68EN5	471 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	STEAP1B	Q6NZ63	245 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	PNCK	Q6P2M8	343 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	NAXD	Q8IW45	347 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	DHRSX	Q8N5I4	330 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	OR6K2	Q8NGY2	324 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	OR2V1	Q8NHB1	315 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	ABHD4	Q8TB40	342 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	ACTRT1	Q8TDG2	376 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	NEIL2	Q969S2	332 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	PLEKHF1	Q96S99	279 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	SEC22C	Q9BRL7	303 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	COMMD4	Q9H0A8	199 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	PATZ1	Q9HBE1	687 aa	Known RBP	4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	RETN	Q9HD89	108 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	SLC38A7	Q9NVC3	462 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	B4GALT7	Q9UBV7	327 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	GUCA1B	Q9UMX6	200 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	CSNK1G3	Q9Y6M4	447 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	RICTOR	Q6R327	1708 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	TMEM131L	A2VDJ0	1609 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	STK36	Q9NRP7	1315 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	MYO5B	Q9ULV0	1848 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967		A0A1B0GVI7	797 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	PRR23A	A6NEV1	266 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	VSTM2B	A6NLU5	285 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967		G3V3Y1	287 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	WNT9B	O14905	357 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	ACOX3	O15254	700 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	TGOLN2	O43493	480 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	NUAK1	O60285	661 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	ZIC3	O60481	467 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	SEMA7A	O75326	666 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	SRP72	O76094	671 aa	Known RBP	4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	H1F0	P07305	194 aa	Known RBP	4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	UMOD	P07911	640 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	SLURP2	P0DP57	97 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	TNFSF9	P41273	254 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	DAP3	P51398	398 aa	Known RBP	4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	CDH12	P55289	794 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	AES	Q08117	197 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	TAF10	Q12962	218 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	EMC2	Q15006	297 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	ARL6IP1	Q15041	203 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	RFX4	Q33E94	735 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	SLC35D3	Q5M8T2	416 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	PDSS1	Q5T2R2	415 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	LRRN1	Q6UXK5	716 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967		Q6ZRG5	221 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	TTLL10	Q6ZVT0	673 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	RCOR2	Q8IZ40	523 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	CMTM1	Q8IZ96	169 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	GBGT1	Q8N5D6	347 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	MS4A15	Q8N5U1	240 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	TEX45	Q8NA69	505 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	LFNG	Q8NES3	379 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	ACER1	Q8TDN7	264 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	HAS1	Q92839	578 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	ITCH	Q96J02	903 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	KCNA7	Q96RP8	456 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	CLCC1	Q96S66	551 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	TEAD3	Q99594	435 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	MACROD1	Q9BQ69	325 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	NAT10	Q9H0A0	1025 aa	Known RBP	4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	AAMDC	Q9H7C9	122 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	NIPAL2	Q9H841	368 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	XPNPEP1	Q9NQW7	623 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	LAMP3	Q9UQV4	416 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	STYXL1	Q9Y6J8	313 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	ATP7B	P35670	1465 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	LRRC7	Q96NW7	1537 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	DLC1	Q96QB1	1528 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	EFCAB10	A6NFE3	127 aa		4.59	□□□□□ -1.67
ECHDC1-222	ENST00000531967	USP27X	A6NNY8	438 aa		4.59	□□□□□ -1.67
ECHDC1-222	ENST00000531967	P2RX6	O15547	441 aa		4.59	□□□□□ -1.67
ECHDC1-222	ENST00000531967	EIF4E2	O60573	245 aa	Known RBP	4.59	□□□□□ -1.67
ECHDC1-222	ENST00000531967	GJB5	O95377	273 aa		4.59	□□□□□ -1.67
ECHDC1-222	ENST00000531967	RNH1	P13489	461 aa	Known RBP	4.59	□□□□□ -1.67
ECHDC1-222	ENST00000531967	MRPS22	P82650	360 aa	Known RBP	4.59	□□□□□ -1.67
ECHDC1-222	ENST00000531967	CNTN1	Q12860	1018 aa		4.59	□□□□□ -1.67
ECHDC1-222	ENST00000531967	PON3	Q15166	354 aa		4.59	□□□□□ -1.67
ECHDC1-222	ENST00000531967	LRRC37A5P	Q49AS3	106 aa		4.59	□□□□□ -1.67
ECHDC1-222	ENST00000531967	RBM48	Q5RL73	367 aa	Known RBP	4.59	□□□□□ -1.67
ECHDC1-222	ENST00000531967	LPCAT4	Q643R3	524 aa		4.59	□□□□□ -1.67
ECHDC1-222	ENST00000531967	SPESP1	Q6UW49	350 aa		4.59	□□□□□ -1.67
ECHDC1-222	ENST00000531967	HACD2	Q6Y1H2	254 aa		4.59	□□□□□ -1.67
ECHDC1-222	ENST00000531967	ZNF836	Q6ZNA1	936 aa		4.59	□□□□□ -1.67
ECHDC1-222	ENST00000531967	CYS1	Q717R9	158 aa		4.59	□□□□□ -1.67
ECHDC1-222	ENST00000531967	IFT20	Q8IY31	132 aa		4.59	□□□□□ -1.67
ECHDC1-222	ENST00000531967	OR5AK3P	Q8NH89	298 aa		4.59	□□□□□ -1.67
ECHDC1-222	ENST00000531967	AGAP11	Q8TF27	550 aa		4.59	□□□□□ -1.67
ECHDC1-222	ENST00000531967	YIPF6	Q96EC8	236 aa		4.59	□□□□□ -1.67
ECHDC1-222	ENST00000531967	IL12RB2	Q99665	862 aa		4.59	□□□□□ -1.67

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