RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 ERVK-25P63136 954 aa2.11□□□□□ -2.07
CD44-234ENST00000531873 IRF8Q02556 426 aa2.11□□□□□ -2.07
CD44-234ENST00000531873 LIPEQ05469 1076 aa2.11□□□□□ -2.07
CD44-234ENST00000531873 SPAG1Q07617 926 aa2.11□□□□□ -2.07
CD44-234ENST00000531873 IL18Q14116 193 aa2.11□□□□□ -2.07
CD44-234ENST00000531873 ITIH4Q14624 930 aa2.11□□□□□ -2.07
CD44-234ENST00000531873 CYTH1Q15438 398 aa2.11□□□□□ -2.07
CD44-234ENST00000531873 ZNF239Q16600 458 aaKnown RBP2.11□□□□□ -2.07
CD44-234ENST00000531873 SOHLH1Q5JUK2 328 aa2.11□□□□□ -2.07
CD44-234ENST00000531873 SPINK14Q6IE38 97 aa2.11□□□□□ -2.07
CD44-234ENST00000531873 TMEM53Q6P2H8 277 aa2.11□□□□□ -2.07
CD44-234ENST00000531873 TMIGD1Q6UXZ0 262 aa2.11□□□□□ -2.07
CD44-234ENST00000531873 EIF3MQ7L2H7 374 aaKnown RBP2.11□□□□□ -2.07
CD44-234ENST00000531873 CENPQQ7L2Z9 268 aaPredicted RBP2.11□□□□□ -2.07
CD44-234ENST00000531873 SLC16A14Q7RTX9 510 aa2.11□□□□□ -2.07
CD44-234ENST00000531873 TMCO2Q7Z6W1 182 aaPredicted RBP2.11□□□□□ -2.07
CD44-234ENST00000531873 LUZP2Q86TE4 346 aa2.11□□□□□ -2.07
CD44-234ENST00000531873 P2RY8Q86VZ1 359 aa2.11□□□□□ -2.07
CD44-234ENST00000531873 TGIF2LYQ8IUE0 185 aa2.11□□□□□ -2.07
CD44-234ENST00000531873 ZNF100Q8IYN0 542 aa2.11□□□□□ -2.07
CD44-234ENST00000531873 COMMD1Q8N668 190 aa2.11□□□□□ -2.07
CD44-234ENST00000531873 C14orf178Q8N769 122 aaPredicted RBP2.11□□□□□ -2.07
CD44-234ENST00000531873 ZNF740Q8NDX6 193 aa2.11□□□□□ -2.07
CD44-234ENST00000531873 OR4A4PQ8NGN8 299 aa2.11□□□□□ -2.07
CD44-234ENST00000531873 C16orf74Q96GX8 76 aa2.11□□□□□ -2.07
CD44-234ENST00000531873 FCRL1Q96LA6 429 aa2.11□□□□□ -2.07
CD44-234ENST00000531873 TSNARE1Q96NA8 513 aa2.11□□□□□ -2.07
CD44-234ENST00000531873 NICN1Q9BSH3 213 aa2.11□□□□□ -2.07
CD44-234ENST00000531873 RIOK2Q9BVS4 552 aaKnown RBP2.11□□□□□ -2.07
CD44-234ENST00000531873 SRMSQ9H3Y6 488 aa2.11□□□□□ -2.07
CD44-234ENST00000531873 UGT1A10Q9HAW8 530 aa2.11□□□□□ -2.07
CD44-234ENST00000531873 TUBG2Q9NRH3 451 aa2.11□□□□□ -2.07
CD44-234ENST00000531873 GPATCH2LQ9NWQ4 482 aa2.11□□□□□ -2.07
CD44-234ENST00000531873 CALYQ9NYX4 217 aa2.11□□□□□ -2.07
CD44-234ENST00000531873 PDP1Q9P0J1 537 aaPredicted RBP2.11□□□□□ -2.07
CD44-234ENST00000531873 XCL2Q9UBD3 114 aa2.11□□□□□ -2.07
CD44-234ENST00000531873 NAP1L2Q9ULW6 460 aaPredicted RBP2.11□□□□□ -2.07
CD44-234ENST00000531873 PACSIN2Q9UNF0 486 aaPredicted RBP2.11□□□□□ -2.07
CD44-234ENST00000531873 ASF1AQ9Y294 204 aa2.11□□□□□ -2.07
CD44-234ENST00000531873 FANCIQ9NVI1 1328 aa2.11□□□□□ -2.07
CD44-234ENST00000531873 ZNFX1Q9P2E3 1918 aaKnown RBP2.11□□□□□ -2.07
CD44-234ENST00000531873 TRBV9A0A0B4J1U6 114 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 IGKV1D-13A0A0B4J2D9 117 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 FAM231BA6NCW3 169 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 ZNF726A6NNF4 738 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 L7N2F9 121 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 PPP1R2P9O14990 202 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 MRPS12O15235 138 aaKnown RBP2.1□□□□□ -2.07
CD44-234ENST00000531873 AKR7A2O43488 359 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 SOX15O60248 233 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 NPIPB7O75200 414 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 ERCC1P07992 297 aaPredicted RBP2.1□□□□□ -2.07
CD44-234ENST00000531873 CHTF8P0CG12 524 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 IGKV1-13P0DP09 117 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 CCNB1P14635 433 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 FOLR1P15328 257 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 ZNF24P17028 368 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 COX7A1P24310 79 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 STOMP27105 288 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 RRM2P31350 389 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 NAA10P41227 235 aaPredicted RBP2.1□□□□□ -2.07
CD44-234ENST00000531873 GPR6P46095 362 aaPredicted RBP2.1□□□□□ -2.07
CD44-234ENST00000531873 SUB1P53999 127 aaKnown RBP eCLIP2.1□□□□□ -2.07
CD44-234ENST00000531873 CLDN8P56748 225 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 TAS2R19P59542 299 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 PAX5Q02548 391 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 MAB21L1Q13394 359 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 KIAA0087Q14695 138 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 HERPUD1Q15011 391 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 HSDL1Q3SXM5 330 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 AGBL2Q5U5Z8 902 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 C9orf135Q5VTT2 229 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 C22orf42Q6IC83 251 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 REEP3Q6NUK4 255 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 FBXL22Q6P050 247 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 CERS6Q6ZMG9 384 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 RALGPS2Q86X27 583 aaPredicted RBP2.1□□□□□ -2.07
CD44-234ENST00000531873 TMEM61Q8N0U2 210 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 IQCKQ8N0W5 287 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 PDIK1LQ8N165 341 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 GABRG1Q8N1C3 465 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 ZADH2Q8N4Q0 377 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 HSD17B11Q8NBQ5 300 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 VN1R2Q8NFZ6 395 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 OR2G2Q8NGZ5 317 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 FANK1Q8TC84 345 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 PIBF1Q8WXW3 757 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 DCUN1D4Q92564 292 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 TMEM54Q969K7 222 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 ANKRD9Q96BM1 317 aaPredicted RBP2.1□□□□□ -2.07
CD44-234ENST00000531873 ZNF707Q96C28 371 aaPredicted RBP2.1□□□□□ -2.07
CD44-234ENST00000531873 LRRC58Q96CX6 371 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 CCDC126Q96EE4 140 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 MED8Q96G25 268 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 RARRES2Q99969 163 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 KCTD14Q9BQ13 255 aaPredicted RBP2.1□□□□□ -2.07
CD44-234ENST00000531873 TEKT3Q9BXF9 490 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 POLR2J2Q9GZM3 115 aaKnown RBP2.1□□□□□ -2.07
CD44-234ENST00000531873 POLR2J3Q9H1A7 115 aaKnown RBP2.1□□□□□ -2.07
CD44-234ENST00000531873 RANBP3Q9H6Z4 567 aaPredicted RBP2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms