RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 DOCK7Q96N67 2140 aa4.49□□□□□ -1.69
AMBRA1-209ENST00000529963 SFXN2Q96NB2 322 aa4.49□□□□□ -1.69
AMBRA1-209ENST00000529963 FAM111AQ96PZ2 611 aa4.49□□□□□ -1.69
AMBRA1-209ENST00000529963 NODALQ96S42 347 aa4.49□□□□□ -1.69
AMBRA1-209ENST00000529963 CCL19Q99731 98 aa4.49□□□□□ -1.69
AMBRA1-209ENST00000529963 LRRC1Q9BTT6 524 aa4.49□□□□□ -1.69
AMBRA1-209ENST00000529963 FAIM2Q9BWQ8 316 aa4.49□□□□□ -1.69
AMBRA1-209ENST00000529963 KRTAP17-1Q9BYP8 105 aa4.49□□□□□ -1.69
AMBRA1-209ENST00000529963 SLCO5A1Q9H2Y9 848 aa4.49□□□□□ -1.69
AMBRA1-209ENST00000529963 ELOVL6Q9H5J4 265 aa4.49□□□□□ -1.69
AMBRA1-209ENST00000529963 NOL11Q9H8H0 719 aaKnown RBP4.49□□□□□ -1.69
AMBRA1-209ENST00000529963 HAO2Q9NYQ3 351 aa4.49□□□□□ -1.69
AMBRA1-209ENST00000529963 ZNF226Q9NYT6 803 aa4.49□□□□□ -1.69
AMBRA1-209ENST00000529963 MAT2BQ9NZL9 334 aa4.49□□□□□ -1.69
AMBRA1-209ENST00000529963 CLCF1Q9UBD9 225 aa4.49□□□□□ -1.69
AMBRA1-209ENST00000529963 DNAJB9Q9UBS3 223 aa4.49□□□□□ -1.69
AMBRA1-209ENST00000529963 OR14J1Q9UGF5 321 aa4.49□□□□□ -1.69
AMBRA1-209ENST00000529963 DKKL1Q9UK85 242 aa4.49□□□□□ -1.69
AMBRA1-209ENST00000529963 TMCO1Q9UM00 188 aa4.49□□□□□ -1.69
AMBRA1-209ENST00000529963 DLGAP4Q9Y2H0 992 aa4.49□□□□□ -1.69
AMBRA1-209ENST00000529963 UTP11Q9Y3A2 253 aaKnown RBP4.49□□□□□ -1.69
AMBRA1-209ENST00000529963 RNF11Q9Y3C5 154 aa4.49□□□□□ -1.69
AMBRA1-209ENST00000529963 MED12Q93074 2177 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 A0A0U1RQK1 487 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 A0A1W2PNV4 684 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 A0A1W2PPR1 153 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 ZNF320A2RRD8 509 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 FRG2CA6NGY1 282 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 OR6C70A6NIJ9 312 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 H0YAE9 185 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 M0QZ24 198 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 PLOD2O00469 737 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 TO15178 435 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 KCNAB3O43448 404 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 FMO6PO60774 539 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 SMIM24O75264 130 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 UGT2B11O75310 529 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 REM1O75628 298 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 KLHL2O95198 593 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 SIX3O95343 332 aaPredicted RBP4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 LY6G6DO95868 133 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 BCL10O95999 233 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 ZNF708P17019 499 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 DDX5P17844 614 aaKnown RBP4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 S1PR1P21453 382 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 DRD5P21918 477 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 TCEA1P23193 301 aaKnown RBP4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 IL12BP29460 328 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 FEN1P39748 380 aaKnown RBP4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 CD79BP40259 229 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 PTGDSP41222 190 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 MAGEA4P43358 317 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 PPICP45877 212 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 SERPINB8P50452 374 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 LHX2P50458 406 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 BMXP51813 675 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 CAPZA1P52907 286 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 PLTPP55058 493 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 SEC61BP60468 96 aaKnown RBP4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 PSPHP78330 225 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 MRPS22P82650 360 aaKnown RBP4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 MRPS25P82663 173 aaKnown RBP4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 HMGCS1Q01581 520 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 EXOSC7Q15024 291 aaKnown RBP4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 BCL2A1Q16548 175 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 ACKR1Q16570 336 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 PNLIPRP3Q17RR3 467 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 ZNF674Q2M3X9 581 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 MSANTD1Q6ZTZ1 278 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 COMMD6Q7Z4G1 85 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 SATL1Q86VE3 508 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 PLCZ1Q86YW0 608 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 METTL4Q8N3J2 472 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 CNEP1R1Q8N9A8 125 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 WDSUB1Q8N9V3 476 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 OR4K17Q8NGC6 315 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 OR52B6Q8NGF0 335 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 OR52R1Q8NGF1 315 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 ANP32BQ92688 251 aaKnown RBP4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 TMBIM1Q969X1 311 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 COL21A1Q96P44 957 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 SLC39A3Q9BRY0 314 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 MED18Q9BUE0 208 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 NTMT1Q9BV86 223 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 RAB17Q9H0T7 212 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 UBTD1Q9HAC8 227 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 NMRK1Q9NWW6 199 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 C6orf203Q9P0P8 240 aaPredicted RBP4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 ZNF639Q9UID6 485 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 CES1P1Q9UKY3 287 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 PLLPQ9Y342 182 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 MRPS18CQ9Y3D5 142 aaKnown RBP4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 WIF1Q9Y5W5 379 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 ZNF780BQ9Y6R6 833 aa4.48□□□□□ -1.69
AMBRA1-209ENST00000529963 CHD3Q12873 2000 aaKnown RBP4.47□□□□□ -1.69
AMBRA1-209ENST00000529963 KIAA1549Q9HCM3 1950 aa4.47□□□□□ -1.69
AMBRA1-209ENST00000529963 UQCRHLA0A096LP55 91 aa4.47□□□□□ -1.69
AMBRA1-209ENST00000529963 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.47□□□□□ -1.69
AMBRA1-209ENST00000529963 A0A0G2JPF8 293 aa4.47□□□□□ -1.69
AMBRA1-209ENST00000529963 SLC22A20A6NK97 555 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms