RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 TPST2O60704 377 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 TROVE2P10155 538 aaKnown RBP eCLIP6.17□□□□□ -1.42
ITGB1-218ENST00000528877 CD40P25942 277 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 RPS5P46782 204 aaKnown RBP6.17□□□□□ -1.42
ITGB1-218ENST00000528877 GZMMP51124 257 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 CRYBA2P53672 197 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 FOXG1P55316 489 aaPredicted RBP6.17□□□□□ -1.42
ITGB1-218ENST00000528877 RGS8P57771 180 aaPredicted RBP6.17□□□□□ -1.42
ITGB1-218ENST00000528877 MTPNP58546 118 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 NCALDP61601 193 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 HOXC5Q00444 222 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 DMTNQ08495 405 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 SELPLGQ14242 412 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 CAPRIN1Q14444 709 aaKnown RBP6.17□□□□□ -1.42
ITGB1-218ENST00000528877 MFSD13AQ14CX5 517 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 CYP51A1Q16850 503 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 GLIPR1L2Q4G1C9 344 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 C11orf71Q6IPW1 123 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 CGB2Q6NT52 195 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 ZNF544Q6NX49 715 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 ZNF613Q6PF04 617 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 CCDC80Q76M96 950 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 ZNF627Q7L945 461 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 AAED1Q7RTV5 226 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 PATL1Q86TB9 770 aaKnown RBP6.17□□□□□ -1.42
ITGB1-218ENST00000528877 GPAT4Q86UL3 456 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 RANBP3LQ86VV4 465 aaPredicted RBP6.17□□□□□ -1.42
ITGB1-218ENST00000528877 TMEM123Q8N131 208 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 TAAR8Q969N4 342 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 KTI12Q96EK9 354 aaPredicted RBP6.17□□□□□ -1.42
ITGB1-218ENST00000528877 DNAJA3Q96EY1 480 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 SLC47A1Q96FL8 570 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 ALKBH3Q96Q83 286 aaPredicted RBP6.17□□□□□ -1.42
ITGB1-218ENST00000528877 EPYCQ99645 322 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 DHRS9Q9BPW9 319 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 ZNF426Q9BUY5 554 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 TMEM120AQ9BXJ8 343 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 SLC19A3Q9BZV2 496 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 ZNF446Q9NWS9 450 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 ADPRHL2Q9NX46 363 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 CRNNQ9UBG3 495 aaPredicted RBP6.17□□□□□ -1.42
ITGB1-218ENST00000528877 UPB1Q9UBR1 384 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 RPS6KB2Q9UBS0 482 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 LAMP3Q9UQV4 416 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 FBN3Q75N90 2809 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 HIVEP2P31629 2446 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 USF3Q68DE3 2245 aa6.17□□□□□ -1.42
ITGB1-218ENST00000528877 CIB4A0PJX0 185 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 H7C1Q1 480 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 H7C417 338 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 FBP2O00757 339 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 CHP2O43745 196 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 AKAP8O43823 692 aaKnown RBP6.16□□□□□ -1.42
ITGB1-218ENST00000528877 LGI1O95970 557 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 MT-ATP6P00846 226 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 IGF2P01344 180 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 IGLV1-44P01699 117 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 CD8AP01732 235 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 IGHV4-39P01824 125 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 BGLAPP02818 100 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 ZNF43P17038 809 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 GTF2E2P29084 291 aaKnown RBP6.16□□□□□ -1.42
ITGB1-218ENST00000528877 AQP1P29972 269 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 SELENOPP49908 381 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 ATP5J2P56134 94 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 PRPS1P60891 318 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 SPOCK1Q08629 439 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 NFYCQ13952 458 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 MAPRE2Q15555 327 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 OR1Q1Q15612 314 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 NPTX1Q15818 432 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 INTS11Q5TA45 600 aaKnown RBP6.16□□□□□ -1.42
ITGB1-218ENST00000528877 AGAP6Q5VW22 663 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 TMEM225Q6GV28 225 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 NHLRC1Q6VVB1 395 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 B3GLCTQ6Y288 498 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 H1FNTQ75WM6 255 aaPredicted RBP6.16□□□□□ -1.42
ITGB1-218ENST00000528877 LINGO2Q7L985 606 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 CALHM3Q86XJ0 350 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 GPR32P1Q8NGA4 272 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 OR1K1Q8NGR3 316 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 OR52N5Q8NH56 324 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 RASSF5Q8WWW0 418 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 NEUROG1Q92886 237 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 PPP1R14AQ96A00 147 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 LRR1Q96L50 414 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 CCDC140Q96MF4 163 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 OXGR1Q96P68 337 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 OR2M2Q96R28 347 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 SH3GL1Q99961 368 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 WFDC6Q9BQY6 131 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 KATNB1Q9BVA0 655 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 POLR2J2Q9GZM3 115 aaKnown RBP6.16□□□□□ -1.42
ITGB1-218ENST00000528877 POLR2J3Q9H1A7 115 aaKnown RBP6.16□□□□□ -1.42
ITGB1-218ENST00000528877 NELFAQ9H3P2 528 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 BARX1Q9HBU1 254 aaPredicted RBP6.16□□□□□ -1.42
ITGB1-218ENST00000528877 MED4Q9NPJ6 270 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 FGFR1OP2Q9NVK5 253 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 MRPL39Q9NYK5 338 aaKnown RBP6.16□□□□□ -1.42
ITGB1-218ENST00000528877 SEC14L4Q9UDX3 406 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms