RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 RUNDC3AQ59EK9 446 aa13.39□□□□□ -0.27
CLNS1A-210ENST00000528364 AGBL2Q5U5Z8 902 aa13.39□□□□□ -0.27
CLNS1A-210ENST00000528364 LRP11Q86VZ4 500 aa13.39□□□□□ -0.27
CLNS1A-210ENST00000528364 PTOV1Q86YD1 416 aa13.39□□□□□ -0.27
CLNS1A-210ENST00000528364 RBM45Q8IUH3 476 aaKnown RBP13.39□□□□□ -0.27
CLNS1A-210ENST00000528364 ARMC8Q8IUR7 673 aa13.39□□□□□ -0.27
CLNS1A-210ENST00000528364 CCDC36Q8IYA8 594 aa13.39□□□□□ -0.27
CLNS1A-210ENST00000528364 ZNF786Q8N393 782 aa13.39□□□□□ -0.27
CLNS1A-210ENST00000528364 ZNF540Q8NDQ6 660 aa13.39□□□□□ -0.27
CLNS1A-210ENST00000528364 OR6N1Q8NGY5 312 aa13.39□□□□□ -0.27
CLNS1A-210ENST00000528364 OR6S1Q8NH40 331 aa13.39□□□□□ -0.27
CLNS1A-210ENST00000528364 FGFBP3Q8TAT2 258 aa13.39□□□□□ -0.27
CLNS1A-210ENST00000528364 LRRC8CQ8TDW0 803 aa13.39□□□□□ -0.27
CLNS1A-210ENST00000528364 UBASH3BQ8TF42 649 aa13.39□□□□□ -0.27
CLNS1A-210ENST00000528364 NEU4Q8WWR8 484 aaPredicted RBP13.39□□□□□ -0.27
CLNS1A-210ENST00000528364 THOC1Q96FV9 657 aaKnown RBP13.39□□□□□ -0.27
CLNS1A-210ENST00000528364 LRR1Q96L50 414 aa13.39□□□□□ -0.27
CLNS1A-210ENST00000528364 SNX18Q96RF0 628 aa13.39□□□□□ -0.27
CLNS1A-210ENST00000528364 ZNF607Q96SK3 696 aa13.39□□□□□ -0.27
CLNS1A-210ENST00000528364 EPYCQ99645 322 aa13.39□□□□□ -0.27
CLNS1A-210ENST00000528364 MCHR1Q99705 422 aa13.39□□□□□ -0.27
CLNS1A-210ENST00000528364 CPPED1Q9BRF8 314 aaPredicted RBP13.39□□□□□ -0.27
CLNS1A-210ENST00000528364 TMEM38AQ9H6F2 299 aa13.39□□□□□ -0.27
CLNS1A-210ENST00000528364 MOV10Q9HCE1 1003 aaKnown RBP13.39□□□□□ -0.27
CLNS1A-210ENST00000528364 MRPL39Q9NYK5 338 aaKnown RBP13.39□□□□□ -0.27
CLNS1A-210ENST00000528364 TESQ9UGI8 421 aaKnown RBP13.39□□□□□ -0.27
CLNS1A-210ENST00000528364 CMAHPQ9Y471 501 aa13.39□□□□□ -0.27
CLNS1A-210ENST00000528364 CORINQ9Y5Q5 1042 aa13.39□□□□□ -0.27
CLNS1A-210ENST00000528364 GMEB1Q9Y692 573 aa13.39□□□□□ -0.27
CLNS1A-210ENST00000528364 SVEP1Q4LDE5 3571 aa13.38□□□□□ -0.27
CLNS1A-210ENST00000528364 PRORSD1PA6NEY8 169 aa13.38□□□□□ -0.27
CLNS1A-210ENST00000528364 ZNF726A6NNF4 738 aa13.38□□□□□ -0.27
CLNS1A-210ENST00000528364 EVPLLA8MZ36 301 aa13.38□□□□□ -0.27
CLNS1A-210ENST00000528364 M0QX08 132 aa13.38□□□□□ -0.27
CLNS1A-210ENST00000528364 SERPINB7O75635 380 aa13.38□□□□□ -0.27
CLNS1A-210ENST00000528364 THY1P04216 161 aa13.38□□□□□ -0.27
CLNS1A-210ENST00000528364 ZNF35P13682 527 aa13.38□□□□□ -0.27
CLNS1A-210ENST00000528364 ZNF14P17017 642 aaPredicted RBP13.38□□□□□ -0.27
CLNS1A-210ENST00000528364 GIPRP48546 466 aa13.38□□□□□ -0.27
CLNS1A-210ENST00000528364 PTDSS1P48651 473 aaKnown RBP13.38□□□□□ -0.27
CLNS1A-210ENST00000528364 SEC24CP53992 1094 aa13.38□□□□□ -0.27
CLNS1A-210ENST00000528364 BIDP55957 195 aa13.38□□□□□ -0.27
CLNS1A-210ENST00000528364 PUDPQ08623 228 aa13.38□□□□□ -0.27
CLNS1A-210ENST00000528364 NPTX1Q15818 432 aa13.38□□□□□ -0.27
CLNS1A-210ENST00000528364 DUSP7Q16829 419 aa13.38□□□□□ -0.27
CLNS1A-210ENST00000528364 GSG1Q2KHT4 349 aa13.38□□□□□ -0.27
CLNS1A-210ENST00000528364 LINC00114Q6XXX2 140 aa13.38□□□□□ -0.27
CLNS1A-210ENST00000528364 WDR88Q6ZMY6 472 aa13.38□□□□□ -0.27
CLNS1A-210ENST00000528364 CARM1Q86X55 608 aa13.38□□□□□ -0.27
CLNS1A-210ENST00000528364 SCAIQ8N9R8 606 aa13.38□□□□□ -0.27
CLNS1A-210ENST00000528364 HIPK4Q8NE63 616 aa13.38□□□□□ -0.27
CLNS1A-210ENST00000528364 IL17RDQ8NFM7 739 aa13.38□□□□□ -0.27
CLNS1A-210ENST00000528364 GPR32P1Q8NGA4 272 aa13.38□□□□□ -0.27
CLNS1A-210ENST00000528364 OR4D11Q8NGI4 311 aa13.38□□□□□ -0.27
CLNS1A-210ENST00000528364 SYT3Q9BQG1 590 aa13.38□□□□□ -0.27
CLNS1A-210ENST00000528364 C19orf24Q9BVV8 132 aa13.38□□□□□ -0.27
CLNS1A-210ENST00000528364 SLC13A4Q9UKG4 626 aa13.38□□□□□ -0.27
CLNS1A-210ENST00000528364 FZR1Q9UM11 496 aa13.38□□□□□ -0.27
CLNS1A-210ENST00000528364 NOX1Q9Y5S8 564 aa13.38□□□□□ -0.27
CLNS1A-210ENST00000528364 CPSF4LA6NMK7 179 aaKnown RBP13.37□□□□□ -0.27
CLNS1A-210ENST00000528364 ERLIN1O75477 346 aa13.37□□□□□ -0.27
CLNS1A-210ENST00000528364 LYPD3O95274 346 aa13.37□□□□□ -0.27
CLNS1A-210ENST00000528364 CH25HO95992 272 aa13.37□□□□□ -0.27
CLNS1A-210ENST00000528364 TACSTD2P09758 323 aa13.37□□□□□ -0.27
CLNS1A-210ENST00000528364 ADORA3P0DMS8 318 aa13.37□□□□□ -0.27
CLNS1A-210ENST00000528364 IFNGR1P15260 489 aa13.37□□□□□ -0.27
CLNS1A-210ENST00000528364 COL8A2P25067 703 aa13.37□□□□□ -0.27
CLNS1A-210ENST00000528364 THBS2P35442 1172 aa13.37□□□□□ -0.27
CLNS1A-210ENST00000528364 ALDH3B1P43353 468 aa13.37□□□□□ -0.27
CLNS1A-210ENST00000528364 RAB1AP62820 205 aa13.37□□□□□ -0.27
CLNS1A-210ENST00000528364 RIN1Q13671 783 aa13.37□□□□□ -0.27
CLNS1A-210ENST00000528364 RAB39AQ14964 217 aa13.37□□□□□ -0.27
CLNS1A-210ENST00000528364 MAD2L1BPQ15013 274 aaPredicted RBP13.37□□□□□ -0.27
CLNS1A-210ENST00000528364 PXKQ7Z7A4 578 aa13.37□□□□□ -0.27
CLNS1A-210ENST00000528364 RETREG3Q86VR2 466 aa13.37□□□□□ -0.27
CLNS1A-210ENST00000528364 TSPYL5Q86VY4 417 aaPredicted RBP13.37□□□□□ -0.27
CLNS1A-210ENST00000528364 SKA3Q8IX90 412 aa13.37□□□□□ -0.27
CLNS1A-210ENST00000528364 LRRC17Q8N6Y2 441 aa13.37□□□□□ -0.27
CLNS1A-210ENST00000528364 OR6T1Q8NGN1 323 aa13.37□□□□□ -0.27
CLNS1A-210ENST00000528364 MRPL24Q96A35 216 aaKnown RBP13.37□□□□□ -0.27
CLNS1A-210ENST00000528364 C1orf159Q96HA4 380 aa13.37□□□□□ -0.27
CLNS1A-210ENST00000528364 ARHGDIGQ99819 225 aa13.37□□□□□ -0.27
CLNS1A-210ENST00000528364 FOXB1Q99853 325 aa13.37□□□□□ -0.27
CLNS1A-210ENST00000528364 TMEM43Q9BTV4 400 aa13.37□□□□□ -0.27
CLNS1A-210ENST00000528364 ULBP2Q9BZM5 246 aa13.37□□□□□ -0.27
CLNS1A-210ENST00000528364 B3GAT2Q9NPZ5 323 aa13.37□□□□□ -0.27
CLNS1A-210ENST00000528364 MYEF2Q9P2K5 600 aaKnown RBP13.37□□□□□ -0.27
CLNS1A-210ENST00000528364 REV1Q9UBZ9 1251 aa13.37□□□□□ -0.27
CLNS1A-210ENST00000528364 NBEAL1Q6ZS30 2694 aa13.37□□□□□ -0.27
CLNS1A-210ENST00000528364 HPXP02790 462 aa13.36□□□□□ -0.27
CLNS1A-210ENST00000528364 APEX1P27695 318 aaKnown RBP13.36□□□□□ -0.27
CLNS1A-210ENST00000528364 CSNK1A1P48729 337 aa13.36□□□□□ -0.27
CLNS1A-210ENST00000528364 ATP4BP51164 291 aa13.36□□□□□ -0.27
CLNS1A-210ENST00000528364 CHN2P52757 468 aa13.36□□□□□ -0.27
CLNS1A-210ENST00000528364 PCBP3P57721 371 aaKnown RBP13.36□□□□□ -0.27
CLNS1A-210ENST00000528364 MTPNP58546 118 aa13.36□□□□□ -0.27
CLNS1A-210ENST00000528364 CCNIQ14094 377 aa13.36□□□□□ -0.27
CLNS1A-210ENST00000528364 SQLEQ14534 574 aa13.36□□□□□ -0.27
CLNS1A-210ENST00000528364 TTMPQ5BVD1 217 aa13.36□□□□□ -0.27
CLNS1A-210ENST00000528364 LRFN4Q6PJG9 635 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms