RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 ZNF684Q5T5D7 378 aa13.37□□□□□ -0.27
CAPN1-214ENST00000528165 NKAIN2Q5VXU1 208 aa13.37□□□□□ -0.27
CAPN1-214ENST00000528165 GABRG1Q8N1C3 465 aa13.37□□□□□ -0.27
CAPN1-214ENST00000528165 CLEC1AQ8NC01 280 aa13.37□□□□□ -0.27
CAPN1-214ENST00000528165 ZNF417Q8TAU3 575 aa13.37□□□□□ -0.27
CAPN1-214ENST00000528165 RNF166Q96A37 237 aaPredicted RBP13.37□□□□□ -0.27
CAPN1-214ENST00000528165 CCDC74AQ96AQ1 378 aa13.37□□□□□ -0.27
CAPN1-214ENST00000528165 GAREM1Q9H706 876 aa13.37□□□□□ -0.27
CAPN1-214ENST00000528165 RNF186Q9NXI6 227 aa13.37□□□□□ -0.27
CAPN1-214ENST00000528165 SPHK1Q9NYA1 384 aa13.37□□□□□ -0.27
CAPN1-214ENST00000528165 FRRS1LQ9P0K9 344 aa13.37□□□□□ -0.27
CAPN1-214ENST00000528165 TRBV5-5A0A0J9YX44 114 aa13.36□□□□□ -0.27
CAPN1-214ENST00000528165 F5H0A9 414 aaPredicted RBP13.36□□□□□ -0.27
CAPN1-214ENST00000528165 GLCEO94923 617 aa13.36□□□□□ -0.27
CAPN1-214ENST00000528165 SLC25A4P12235 298 aa13.36□□□□□ -0.27
CAPN1-214ENST00000528165 ADCYAP1P18509 176 aa13.36□□□□□ -0.27
CAPN1-214ENST00000528165 TLX1P31314 330 aaPredicted RBP13.36□□□□□ -0.27
CAPN1-214ENST00000528165 ACTBP60709 375 aa13.36□□□□□ -0.27
CAPN1-214ENST00000528165 ACTG1P63261 375 aa13.36□□□□□ -0.27
CAPN1-214ENST00000528165 SWI5Q1ZZU3 235 aa13.36□□□□□ -0.27
CAPN1-214ENST00000528165 LIPNQ5VXI9 398 aa13.36□□□□□ -0.27
CAPN1-214ENST00000528165 DHRS7BQ6IAN0 325 aaPredicted RBP13.36□□□□□ -0.27
CAPN1-214ENST00000528165 DPY19L2P2Q6ZN68 376 aa13.36□□□□□ -0.27
CAPN1-214ENST00000528165 ACOT7LQ6ZUV0 252 aa13.36□□□□□ -0.27
CAPN1-214ENST00000528165 PGAP1Q75T13 922 aa13.36□□□□□ -0.27
CAPN1-214ENST00000528165 FGF13Q92913 245 aa13.36□□□□□ -0.27
CAPN1-214ENST00000528165 RASD2Q96D21 266 aa13.36□□□□□ -0.27
CAPN1-214ENST00000528165 SLC25A21Q9BQT8 299 aaPredicted RBP13.36□□□□□ -0.27
CAPN1-214ENST00000528165 MKKSQ9NPJ1 570 aaPredicted RBP13.36□□□□□ -0.27
CAPN1-214ENST00000528165 MBD2Q9UBB5 411 aa13.36□□□□□ -0.27
CAPN1-214ENST00000528165 ZNF629Q9UEG4 869 aaPredicted RBP13.36□□□□□ -0.27
CAPN1-214ENST00000528165 KCNK6Q9Y257 313 aa13.36□□□□□ -0.27
CAPN1-214ENST00000528165 TMEM72A0PK05 275 aa13.36□□□□□ -0.27
CAPN1-214ENST00000528165 OR52A4PA6NMU1 304 aa13.36□□□□□ -0.27
CAPN1-214ENST00000528165 LAG3P18627 525 aa13.36□□□□□ -0.27
CAPN1-214ENST00000528165 CD34P28906 385 aa13.36□□□□□ -0.27
CAPN1-214ENST00000528165 GABRA3P34903 492 aa13.36□□□□□ -0.27
CAPN1-214ENST00000528165 ELAVL3Q14576 367 aaKnown RBP13.36□□□□□ -0.27
CAPN1-214ENST00000528165 ZNF77Q15935 545 aa13.36□□□□□ -0.27
CAPN1-214ENST00000528165 LPCAT3Q6P1A2 487 aa13.36□□□□□ -0.27
CAPN1-214ENST00000528165 LINC00469Q8N7U9 141 aa13.36□□□□□ -0.27
CAPN1-214ENST00000528165 ZNF511Q8NB15 262 aa13.36□□□□□ -0.27
CAPN1-214ENST00000528165 KREMEN2Q8NCW0 462 aa13.36□□□□□ -0.27
CAPN1-214ENST00000528165 TMEM106AQ96A25 262 aa13.36□□□□□ -0.27
CAPN1-214ENST00000528165 ADAD1Q96M93 576 aaKnown RBP13.36□□□□□ -0.27
CAPN1-214ENST00000528165 ALG12Q9BV10 488 aa13.36□□□□□ -0.27
CAPN1-214ENST00000528165 TRIM2Q9C040 744 aa13.36□□□□□ -0.27
CAPN1-214ENST00000528165 SFXN1Q9H9B4 322 aa13.36□□□□□ -0.27
CAPN1-214ENST00000528165 TRPV4Q9HBA0 871 aa13.36□□□□□ -0.27
CAPN1-214ENST00000528165 SNRNP200O75643 2136 aaKnown RBP13.36□□□□□ -0.27
CAPN1-214ENST00000528165 HTTP42858 3142 aa13.36□□□□□ -0.27
CAPN1-214ENST00000528165 A0A1B0GTI1 187 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 RNF222A6NCQ9 220 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 LRRC72A6NJI9 287 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 OR2AT4A6NND4 320 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 H3BSH0 61 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 BRINP1O60477 761 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 RAB3DO95716 219 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 WNT11O96014 354 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 IFNA4P05014 189 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 MELTFP08582 738 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 CISD3P0C7P0 127 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 SPP1P10451 314 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 POU3F4P49335 361 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 TAS2R19P59542 299 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 ZNF676Q8N7Q3 588 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 OR1J4Q8NGS1 313 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 OR1J2Q8NGS2 313 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 WFIKKN2Q8TEU8 576 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 C2CD4CQ8TF44 421 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 GLYATL2Q8WU03 294 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 ING5Q8WYH8 240 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 STACQ99469 402 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 CMSS1Q9BQ75 279 aaKnown RBP13.35□□□□□ -0.27
CAPN1-214ENST00000528165 NMNAT2Q9BZQ4 307 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 EPHA6Q9UF33 1036 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 NOP16Q9Y3C1 178 aaKnown RBP13.35□□□□□ -0.27
CAPN1-214ENST00000528165 EDDM13A0A1B0GTR0 161 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 PRICKLE3O43900 615 aaPredicted RBP13.35□□□□□ -0.27
CAPN1-214ENST00000528165 CDC40O60508 579 aaKnown RBP eCLIP13.35□□□□□ -0.27
CAPN1-214ENST00000528165 SRPX2O60687 465 aaPredicted RBP13.35□□□□□ -0.27
CAPN1-214ENST00000528165 UPK3AO75631 287 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 AK1P00568 194 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 SSBP1Q04837 148 aaKnown RBP13.35□□□□□ -0.27
CAPN1-214ENST00000528165 HNRNPA1L2Q32P51 320 aaKnown RBP13.35□□□□□ -0.27
CAPN1-214ENST00000528165 GXYLT1Q4G148 440 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 H3F3CQ6NXT2 135 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 USP53Q70EK8 1073 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 ZCCHC10Q8TBK6 192 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 SFT2D1Q8WV19 159 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 WNT2BQ93097 391 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 NXPE3Q969Y0 559 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 SEC22AQ96IW7 307 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 COMMD4Q9H0A8 199 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 CAPN10Q9HC96 672 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 MRM2Q9UI43 246 aaKnown RBP13.35□□□□□ -0.27
CAPN1-214ENST00000528165 FBXO4Q9UKT5 387 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 MKL2Q9ULH7 1088 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 EDARQ9UNE0 448 aa13.35□□□□□ -0.27
CAPN1-214ENST00000528165 OR1A2Q9Y585 309 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms