RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 LGALS3BPQ08380 585 aa12.35□□□□□ -0.43
CAPN1-212ENST00000527887 EFNB3Q15768 340 aa12.35□□□□□ -0.43
CAPN1-212ENST00000527887 TRMT5Q32P41 509 aaKnown RBP12.35□□□□□ -0.43
CAPN1-212ENST00000527887 MS4A18Q3C1V0 323 aa12.35□□□□□ -0.43
CAPN1-212ENST00000527887 INTS11Q5TA45 600 aaKnown RBP12.35□□□□□ -0.43
CAPN1-212ENST00000527887 PXKQ7Z7A4 578 aa12.35□□□□□ -0.43
CAPN1-212ENST00000527887 PATL1Q86TB9 770 aaKnown RBP12.35□□□□□ -0.43
CAPN1-212ENST00000527887 COMTD1Q86VU5 262 aa12.35□□□□□ -0.43
CAPN1-212ENST00000527887 DEFB107AQ8IZN7 70 aa12.35□□□□□ -0.43
CAPN1-212ENST00000527887 NUP37Q8NFH4 326 aa12.35□□□□□ -0.43
CAPN1-212ENST00000527887 RNF217Q8TC41 542 aa12.35□□□□□ -0.43
CAPN1-212ENST00000527887 C10orf105Q8TEF2 133 aa12.35□□□□□ -0.43
CAPN1-212ENST00000527887 RASSF5Q8WWW0 418 aa12.35□□□□□ -0.43
CAPN1-212ENST00000527887 OR2M2Q96R28 347 aa12.35□□□□□ -0.43
CAPN1-212ENST00000527887 CGREF1Q99674 301 aa12.35□□□□□ -0.43
CAPN1-212ENST00000527887 THTPAQ9BU02 230 aa12.35□□□□□ -0.43
CAPN1-212ENST00000527887 NELFAQ9H3P2 528 aa12.35□□□□□ -0.43
CAPN1-212ENST00000527887 DENND2DQ9H6A0 471 aaPredicted RBP12.35□□□□□ -0.43
CAPN1-212ENST00000527887 CRLF2Q9HC73 371 aa12.35□□□□□ -0.43
CAPN1-212ENST00000527887 SPAG4Q9NPE6 437 aa12.35□□□□□ -0.43
CAPN1-212ENST00000527887 B3GAT2Q9NPZ5 323 aa12.35□□□□□ -0.43
CAPN1-212ENST00000527887 A0A096LPE4 126 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 A0A1W2PPZ6 126 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 A8MV72 311 aaPredicted RBP12.34□□□□□ -0.43
CAPN1-212ENST00000527887 KIAA1324LA8MWY0 1029 aaPredicted RBP12.34□□□□□ -0.43
CAPN1-212ENST00000527887 ZNF99A8MXY4 864 aaPredicted RBP12.34□□□□□ -0.43
CAPN1-212ENST00000527887 M0QX08 132 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 MGRN1O60291 552 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 IFNA2P01563 188 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 BGLAPP02818 100 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 CECR9P0C854 216 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 AQP1P29972 269 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 PDLIM4P50479 330 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 CDH12P55289 794 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 PUDPQ08623 228 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 PMS2P3Q13401 168 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 CYP51A1Q16850 503 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 CEACAM16Q2WEN9 425 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 TMEM249Q2WGJ8 235 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 LINC00114Q6XXX2 140 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 ZNF627Q7L945 461 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 RETREG3Q86VR2 466 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 PTOV1Q86YD1 416 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 C20orf196Q8IYI0 205 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 TMEM123Q8N131 208 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 ZNF525Q8N782 197 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 ZNF540Q8NDQ6 660 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 LRRC58Q96CX6 371 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 FBXO17Q96EF6 278 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 MCHR1Q99705 422 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 ARHGDIGQ99819 225 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 SH3GL1Q99961 368 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 PRR14Q9BWN1 585 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 ZNF442Q9H7R0 627 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 KAT8Q9H7Z6 458 aaKnown RBP12.34□□□□□ -0.43
CAPN1-212ENST00000527887 YAE1D1Q9NRH1 226 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 TMEM160Q9NX00 188 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 SEC14L4Q9UDX3 406 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 USP22Q9UPT9 525 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 COL6A5A8TX70 2615 aa12.34□□□□□ -0.43
CAPN1-212ENST00000527887 ANK3Q12955 4377 aaKnown RBP12.34□□□□□ -0.43
CAPN1-212ENST00000527887 MXRA5Q9NR99 2828 aa12.33□□□□□ -0.44
CAPN1-212ENST00000527887 ZNF726A6NNF4 738 aa12.33□□□□□ -0.44
CAPN1-212ENST00000527887 CHP2O43745 196 aa12.33□□□□□ -0.44
CAPN1-212ENST00000527887 TPST2O60704 377 aa12.33□□□□□ -0.44
CAPN1-212ENST00000527887 ENTPD5O75356 428 aa12.33□□□□□ -0.44
CAPN1-212ENST00000527887 CIB2O75838 187 aa12.33□□□□□ -0.44
CAPN1-212ENST00000527887 USF1P22415 310 aaPredicted RBP12.33□□□□□ -0.44
CAPN1-212ENST00000527887 PPOXP50336 477 aa12.33□□□□□ -0.44
CAPN1-212ENST00000527887 PSME3P61289 254 aa12.33□□□□□ -0.44
CAPN1-212ENST00000527887 ADIPOQQ15848 244 aa12.33□□□□□ -0.44
CAPN1-212ENST00000527887 DUSP7Q16829 419 aa12.33□□□□□ -0.44
CAPN1-212ENST00000527887 SAMD4BQ5PRF9 694 aaKnown RBP12.33□□□□□ -0.44
CAPN1-212ENST00000527887 PODNL1Q6PEZ8 512 aa12.33□□□□□ -0.44
CAPN1-212ENST00000527887 NHLRC1Q6VVB1 395 aa12.33□□□□□ -0.44
CAPN1-212ENST00000527887 MPP4Q96JB8 637 aa12.33□□□□□ -0.44
CAPN1-212ENST00000527887 SLC19A3Q9BZV2 496 aa12.33□□□□□ -0.44
CAPN1-212ENST00000527887 PLK3Q9H4B4 646 aa12.33□□□□□ -0.44
CAPN1-212ENST00000527887 ABCD2Q9UBJ2 740 aa12.33□□□□□ -0.44
CAPN1-212ENST00000527887 SONP18583 2426 aaKnown RBP12.33□□□□□ -0.44
CAPN1-212ENST00000527887 FBN1P35555 2871 aaKnown RBP12.32□□□□□ -0.44
CAPN1-212ENST00000527887 ABCA1O95477 2261 aa12.32□□□□□ -0.44
CAPN1-212ENST00000527887 LOC390937A0A1W2PQ73 354 aa12.32□□□□□ -0.44
CAPN1-212ENST00000527887 SLC35F4A4IF30 521 aa12.32□□□□□ -0.44
CAPN1-212ENST00000527887 FXYD1O00168 92 aa12.32□□□□□ -0.44
CAPN1-212ENST00000527887 PLPP3O14495 311 aa12.32□□□□□ -0.44
CAPN1-212ENST00000527887 OR6A2O95222 327 aa12.32□□□□□ -0.44
CAPN1-212ENST00000527887 ERCC1P07992 297 aaPredicted RBP12.32□□□□□ -0.44
CAPN1-212ENST00000527887 OR4A8P0C604 315 aa12.32□□□□□ -0.44
CAPN1-212ENST00000527887 CBLP22681 906 aa12.32□□□□□ -0.44
CAPN1-212ENST00000527887 POU3F1Q03052 451 aaPredicted RBP12.32□□□□□ -0.44
CAPN1-212ENST00000527887 ZP4Q12836 540 aa12.32□□□□□ -0.44
CAPN1-212ENST00000527887 NFYCQ13952 458 aa12.32□□□□□ -0.44
CAPN1-212ENST00000527887 CHRFAM7AQ494W8 412 aa12.32□□□□□ -0.44
CAPN1-212ENST00000527887 C6orf52Q5T4I8 152 aa12.32□□□□□ -0.44
CAPN1-212ENST00000527887 SLC46A3Q7Z3Q1 461 aa12.32□□□□□ -0.44
CAPN1-212ENST00000527887 LSRQ86X29 649 aaPredicted RBP12.32□□□□□ -0.44
CAPN1-212ENST00000527887 C10orf53Q8N6V4 93 aa12.32□□□□□ -0.44
CAPN1-212ENST00000527887 SMYD1Q8NB12 490 aa12.32□□□□□ -0.44
CAPN1-212ENST00000527887 OR8J3Q8NGG0 315 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms