RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 PAX7P23759 505 aa11.73□□□□□ -0.53
CAPN1-209ENST00000527469 LOXP28300 417 aaPredicted RBP11.73□□□□□ -0.53
CAPN1-209ENST00000527469 CLRN1P58418 232 aa11.73□□□□□ -0.53
CAPN1-209ENST00000527469 SMIM11AP58511 58 aa11.73□□□□□ -0.53
CAPN1-209ENST00000527469 RPL18Q07020 188 aaKnown RBP11.73□□□□□ -0.53
CAPN1-209ENST00000527469 DEFB113Q30KQ7 82 aa11.73□□□□□ -0.53
CAPN1-209ENST00000527469 RNF113BQ8IZP6 322 aaKnown RBP11.73□□□□□ -0.53
CAPN1-209ENST00000527469 OR6X1Q8NH79 312 aa11.73□□□□□ -0.53
CAPN1-209ENST00000527469 TMEM171Q8WVE6 324 aa11.73□□□□□ -0.53
CAPN1-209ENST00000527469 ACOT11Q8WXI4 607 aaPredicted RBP11.73□□□□□ -0.53
CAPN1-209ENST00000527469 FBXW5Q969U6 566 aa11.73□□□□□ -0.53
CAPN1-209ENST00000527469 MBD6Q96DN6 1003 aa11.73□□□□□ -0.53
CAPN1-209ENST00000527469 LRR1Q96L50 414 aa11.73□□□□□ -0.53
CAPN1-209ENST00000527469 ALPK1Q96QP1 1244 aa11.73□□□□□ -0.53
CAPN1-209ENST00000527469 FOXC2Q99958 501 aa11.73□□□□□ -0.53
CAPN1-209ENST00000527469 TMEM204Q9BSN7 226 aa11.73□□□□□ -0.53
CAPN1-209ENST00000527469 ANKRD19PQ9H560 264 aa11.73□□□□□ -0.53
CAPN1-209ENST00000527469 NMNAT1Q9HAN9 279 aaPredicted RBP11.73□□□□□ -0.53
CAPN1-209ENST00000527469 INIPQ9NRY2 104 aa11.73□□□□□ -0.53
CAPN1-209ENST00000527469 FAIMQ9NVQ4 179 aa11.73□□□□□ -0.53
CAPN1-209ENST00000527469 BEX4Q9NWD9 120 aaPredicted RBP11.73□□□□□ -0.53
CAPN1-209ENST00000527469 NPAP1Q9NZP6 1156 aa11.73□□□□□ -0.53
CAPN1-209ENST00000527469 STX18Q9P2W9 335 aaKnown RBP11.73□□□□□ -0.53
CAPN1-209ENST00000527469 CD300AQ9UGN4 299 aa11.73□□□□□ -0.53
CAPN1-209ENST00000527469 TMEM5Q9Y2B1 443 aa11.73□□□□□ -0.53
CAPN1-209ENST00000527469 ZNF99A8MXY4 864 aaPredicted RBP11.72□□□□□ -0.53
CAPN1-209ENST00000527469 FFAR1O14842 300 aa11.72□□□□□ -0.53
CAPN1-209ENST00000527469 ENTPD5O75356 428 aa11.72□□□□□ -0.53
CAPN1-209ENST00000527469 F13BP05160 661 aa11.72□□□□□ -0.53
CAPN1-209ENST00000527469 HOXB1P14653 301 aaPredicted RBP11.72□□□□□ -0.53
CAPN1-209ENST00000527469 CD53P19397 219 aa11.72□□□□□ -0.53
CAPN1-209ENST00000527469 CD40P25942 277 aa11.72□□□□□ -0.53
CAPN1-209ENST00000527469 AQP2P41181 271 aa11.72□□□□□ -0.53
CAPN1-209ENST00000527469 CDH11P55287 796 aa11.72□□□□□ -0.53
CAPN1-209ENST00000527469 MELKQ14680 651 aa11.72□□□□□ -0.53
CAPN1-209ENST00000527469 ALG10Q5BKT4 473 aa11.72□□□□□ -0.53
CAPN1-209ENST00000527469 MBOAT2Q6ZWT7 520 aa11.72□□□□□ -0.53
CAPN1-209ENST00000527469 LINGO2Q7L985 606 aa11.72□□□□□ -0.53
CAPN1-209ENST00000527469 TRPM8Q7Z2W7 1104 aa11.72□□□□□ -0.53
CAPN1-209ENST00000527469 OAFQ86UD1 273 aa11.72□□□□□ -0.53
CAPN1-209ENST00000527469 ZNF611Q8N823 705 aa11.72□□□□□ -0.53
CAPN1-209ENST00000527469 WDR31Q8NA23 367 aa11.72□□□□□ -0.53
CAPN1-209ENST00000527469 KBTBD8Q8NFY9 601 aa11.72□□□□□ -0.53
CAPN1-209ENST00000527469 BCL2L2Q92843 193 aaPredicted RBP11.72□□□□□ -0.53
CAPN1-209ENST00000527469 SLC25A44Q96H78 314 aaPredicted RBP11.72□□□□□ -0.53
CAPN1-209ENST00000527469 PIP5K1AQ99755 562 aa11.72□□□□□ -0.53
CAPN1-209ENST00000527469 CXorf56Q9H5V9 222 aa11.72□□□□□ -0.53
CAPN1-209ENST00000527469 MAN2C1Q9NTJ4 1040 aa11.72□□□□□ -0.53
CAPN1-209ENST00000527469 NDUFAF4Q9P032 175 aa11.72□□□□□ -0.53
CAPN1-209ENST00000527469 PRPF19Q9UMS4 504 aaKnown RBP11.72□□□□□ -0.53
CAPN1-209ENST00000527469 CADP27708 2225 aa11.72□□□□□ -0.53
CAPN1-209ENST00000527469 A0A1W2PRQ8 180 aa11.71□□□□□ -0.53
CAPN1-209ENST00000527469 ARHGEF9O43307 516 aa11.71□□□□□ -0.53
CAPN1-209ENST00000527469 SEC14L2O76054 403 aa11.71□□□□□ -0.53
CAPN1-209ENST00000527469 DIRAS1O95057 198 aa11.71□□□□□ -0.53
CAPN1-209ENST00000527469 FABP3P05413 133 aa11.71□□□□□ -0.53
CAPN1-209ENST00000527469 NR2C1P13056 603 aa11.71□□□□□ -0.53
CAPN1-209ENST00000527469 SLC9A3P48764 834 aa11.71□□□□□ -0.53
CAPN1-209ENST00000527469 TUBA1BP68363 451 aa11.71□□□□□ -0.53
CAPN1-209ENST00000527469 TUBA4AP68366 448 aa11.71□□□□□ -0.53
CAPN1-209ENST00000527469 SPIBQ01892 262 aa11.71□□□□□ -0.53
CAPN1-209ENST00000527469 PRKCDQ05655 676 aa11.71□□□□□ -0.53
CAPN1-209ENST00000527469 TOP3AQ13472 1001 aaPredicted RBP11.71□□□□□ -0.53
CAPN1-209ENST00000527469 DGCR6Q14129 220 aa11.71□□□□□ -0.53
CAPN1-209ENST00000527469 FXNQ16595 210 aa11.71□□□□□ -0.53
CAPN1-209ENST00000527469 ANKDD1AQ495B1 522 aa11.71□□□□□ -0.53
CAPN1-209ENST00000527469 ZNF672Q499Z4 452 aaPredicted RBP11.71□□□□□ -0.53
CAPN1-209ENST00000527469 MTX3Q5HYI7 312 aa11.71□□□□□ -0.53
CAPN1-209ENST00000527469 SEZ6L2Q6UXD5 910 aa11.71□□□□□ -0.53
CAPN1-209ENST00000527469 CYP2R1Q6VVX0 501 aa11.71□□□□□ -0.53
CAPN1-209ENST00000527469 ZNF813Q6ZN06 617 aa11.71□□□□□ -0.53
CAPN1-209ENST00000527469 RINLQ6ZS11 566 aa11.71□□□□□ -0.53
CAPN1-209ENST00000527469 TUBA1AQ71U36 451 aa11.71□□□□□ -0.53
CAPN1-209ENST00000527469 DHFR2Q86XF0 187 aa11.71□□□□□ -0.53
CAPN1-209ENST00000527469 CCDC36Q8IYA8 594 aa11.71□□□□□ -0.53
CAPN1-209ENST00000527469 FAM86B1Q8N7N1 296 aa11.71□□□□□ -0.53
CAPN1-209ENST00000527469 OR52J3Q8NH60 311 aa11.71□□□□□ -0.53
CAPN1-209ENST00000527469 OR51A7Q8NH64 312 aa11.71□□□□□ -0.53
CAPN1-209ENST00000527469 MOSPD2Q8NHP6 518 aa11.71□□□□□ -0.53
CAPN1-209ENST00000527469 MAGEE2Q8TD90 523 aaPredicted RBP11.71□□□□□ -0.53
CAPN1-209ENST00000527469 LIPHQ8WWY8 451 aa11.71□□□□□ -0.53
CAPN1-209ENST00000527469 NANOS1Q8WY41 292 aaKnown RBP11.71□□□□□ -0.53
CAPN1-209ENST00000527469 GTPBP3Q969Y2 492 aaKnown RBP11.71□□□□□ -0.53
CAPN1-209ENST00000527469 LRGUKQ96M69 825 aa11.71□□□□□ -0.53
CAPN1-209ENST00000527469 MUC13Q9H3R2 512 aa11.71□□□□□ -0.53
CAPN1-209ENST00000527469 CISD1Q9NZ45 108 aaKnown RBP11.71□□□□□ -0.53
CAPN1-209ENST00000527469 GLTPQ9NZD2 209 aa11.71□□□□□ -0.53
CAPN1-209ENST00000527469 ACTR3BQ9P1U1 418 aa11.71□□□□□ -0.53
CAPN1-209ENST00000527469 AURKCQ9UQB9 309 aa11.71□□□□□ -0.53
CAPN1-209ENST00000527469 ATP23Q9Y6H3 246 aa11.71□□□□□ -0.53
CAPN1-209ENST00000527469 TEP1Q99973 2627 aaKnown RBP11.71□□□□□ -0.54
CAPN1-209ENST00000527469 F8P00451 2351 aa11.7□□□□□ -0.54
CAPN1-209ENST00000527469 ALPK2Q86TB3 2170 aa11.7□□□□□ -0.54
CAPN1-209ENST00000527469 A0A087WUU8 490 aa11.7□□□□□ -0.54
CAPN1-209ENST00000527469 ARPC4-TTLL3A0A0A6YYG9 625 aa11.7□□□□□ -0.54
CAPN1-209ENST00000527469 PDE5AO76074 875 aa11.7□□□□□ -0.54
CAPN1-209ENST00000527469 CD79AP11912 226 aa11.7□□□□□ -0.54
CAPN1-209ENST00000527469 MAKP20794 623 aa11.7□□□□□ -0.54
CAPN1-209ENST00000527469 RPL4P36578 427 aaKnown RBP11.7□□□□□ -0.54
CAPN1-209ENST00000527469 GPR4P46093 362 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms