RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 ATRQ13535 2644 aa9.05□□□□□ -0.96
PRPF40B-204ENST00000527253 IGHV2OR16-5A0A0B4J2B6 119 aa9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 TMEM129A0AVI4 362 aa9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 AKAP8O43823 692 aaKnown RBP9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 CD5LO43866 347 aa9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 CRLF1O75462 422 aa9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 F12P00748 615 aaPredicted RBP9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 CRYAAP02489 173 aa9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 VIMP08670 466 aaKnown RBP9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 IGFBP1P08833 259 aaPredicted RBP9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 OR4A8P0C604 315 aa9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 ASAH2BP0C7U1 165 aa9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 ADORA3P0DMS8 318 aa9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 PAX7P23759 505 aa9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 THBS4P35443 961 aa9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 SERPINF1P36955 418 aa9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 EFNA4P52798 201 aa9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 UGT2B15P54855 530 aa9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 BIDP55957 195 aa9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 CHRNB3Q05901 458 aa9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 ZP4Q12836 540 aa9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 MSMPQ1L6U9 139 aa9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 INTS11Q5TA45 600 aaKnown RBP9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 TTC33Q6PID6 262 aaPredicted RBP9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 LRFN4Q6PJG9 635 aa9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 SLC35D2Q76EJ3 337 aa9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 ZNF627Q7L945 461 aa9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 ANKS4BQ8N8V4 417 aa9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 FGFBP3Q8TAT2 258 aa9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 SLC26A7Q8TE54 656 aa9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 C10orf105Q8TEF2 133 aa9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 MS4A3Q96HJ5 214 aa9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 SORCS2Q96PQ0 1159 aa9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 ECSITQ9BQ95 431 aa9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 PLK3Q9H4B4 646 aa9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 CCDC134Q9H6E4 229 aa9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 CMTM6Q9NX76 183 aa9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 SH3GLB1Q9Y371 365 aa9.04□□□□□ -0.96
PRPF40B-204ENST00000527253 ZNF726A6NNF4 738 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 BBIP1A8MTZ0 92 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 VWC2LB2RUY7 222 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 NPPAP01160 153 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 PATE4P0C8F1 98 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 B4GALT1P15291 398 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 ARR3P36575 388 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 OR1E2P47887 323 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 DSCR9P59020 149 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 LSM11P83369 360 aaKnown RBP eCLIP9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 PPP2R2BQ00005 443 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 RUNX1T1Q06455 604 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 PIGFQ07326 219 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 LOXL1Q08397 574 aaPredicted RBP9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 NPRL3Q12980 569 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 PIN1Q13526 163 aaPredicted RBP9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 MELKQ14680 651 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 EFNB3Q15768 340 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 MMEL1Q495T6 779 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 CYBRD1Q53TN4 286 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 CLEC2AQ6UVW9 174 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 ZNF813Q6ZN06 617 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 SKA3Q8IX90 412 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 POU5F2Q8N7G0 328 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 NUP37Q8NFH4 326 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 OR4F15Q8NGB8 312 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 OR6N1Q8NGY5 312 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 OR6X1Q8NH79 312 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 PFN4Q8NHR9 129 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 TMEM255BQ8WV15 326 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 PROX1Q92786 737 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 RCN3Q96D15 328 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 MPP4Q96JB8 637 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 DOK1Q99704 481 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 FOXB1Q99853 325 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 SH3GL1Q99961 368 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 KCNS3Q9BQ31 491 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 ULBP2Q9BZM5 246 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 SLC19A3Q9BZV2 496 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 YAE1D1Q9NRH1 226 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 C20orf141Q9NUB4 165 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 RIMS3Q9UJD0 308 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 ZNF229Q9UJW7 825 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 POFUT2Q9Y2G5 429 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 PMF1-BGLAPU3KQ54 211 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 CHD3Q12873 2000 aaKnown RBP9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 DNHD1Q96M86 4753 aa9.03□□□□□ -0.96
PRPF40B-204ENST00000527253 COL6A5A8TX70 2615 aa9.02□□□□□ -0.96
PRPF40B-204ENST00000527253 FAM220BPB1ANY3 271 aa9.02□□□□□ -0.97
PRPF40B-204ENST00000527253 B9A039 149 aa9.02□□□□□ -0.97
PRPF40B-204ENST00000527253 RNF13O43567 381 aa9.02□□□□□ -0.97
PRPF40B-204ENST00000527253 PDE5AO76074 875 aa9.02□□□□□ -0.97
PRPF40B-204ENST00000527253 OR6A2O95222 327 aa9.02□□□□□ -0.97
PRPF40B-204ENST00000527253 CD79AP11912 226 aa9.02□□□□□ -0.97
PRPF40B-204ENST00000527253 ZNF35P13682 527 aa9.02□□□□□ -0.97
PRPF40B-204ENST00000527253 ZNF14P17017 642 aaPredicted RBP9.02□□□□□ -0.97
PRPF40B-204ENST00000527253 FUT1P19526 365 aa9.02□□□□□ -0.97
PRPF40B-204ENST00000527253 NR4A1P22736 598 aa9.02□□□□□ -0.97
PRPF40B-204ENST00000527253 KDELR2P33947 212 aa9.02□□□□□ -0.97
PRPF40B-204ENST00000527253 CAPZA2P47755 286 aa9.02□□□□□ -0.97
PRPF40B-204ENST00000527253 CSNK1A1P48729 337 aa9.02□□□□□ -0.97
PRPF40B-204ENST00000527253 MAPRE2Q15555 327 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms