RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 MYOZ1Q9NP98 299 aaPredicted RBP11.64□□□□□ -0.55
CAPN1-207ENST00000527189 USP22Q9UPT9 525 aa11.64□□□□□ -0.55
CAPN1-207ENST00000527189 FKBP7Q9Y680 259 aa11.64□□□□□ -0.55
CAPN1-207ENST00000527189 TRAPPC13A5PLN9 417 aa11.63□□□□□ -0.55
CAPN1-207ENST00000527189 M0R3G1 203 aa11.63□□□□□ -0.55
CAPN1-207ENST00000527189 M0R3H8 397 aa11.63□□□□□ -0.55
CAPN1-207ENST00000527189 OR6A2O95222 327 aa11.63□□□□□ -0.55
CAPN1-207ENST00000527189 OR4A8P0C604 315 aa11.63□□□□□ -0.55
CAPN1-207ENST00000527189 TROVE2P10155 538 aaKnown RBP eCLIP11.63□□□□□ -0.55
CAPN1-207ENST00000527189 HLA-DOBP13765 273 aa11.63□□□□□ -0.55
CAPN1-207ENST00000527189 AHCYP23526 432 aa11.63□□□□□ -0.55
CAPN1-207ENST00000527189 TUBA1BP68363 451 aa11.63□□□□□ -0.55
CAPN1-207ENST00000527189 TUBA4AP68366 448 aa11.63□□□□□ -0.55
CAPN1-207ENST00000527189 VLDLRP98155 873 aa11.63□□□□□ -0.55
CAPN1-207ENST00000527189 ADIPOQQ15848 244 aa11.63□□□□□ -0.55
CAPN1-207ENST00000527189 TUBA1AQ71U36 451 aa11.63□□□□□ -0.55
CAPN1-207ENST00000527189 HIPK1Q86Z02 1210 aa11.63□□□□□ -0.55
CAPN1-207ENST00000527189 CCDC197Q8NCU1 140 aa11.63□□□□□ -0.55
CAPN1-207ENST00000527189 OR8J3Q8NGG0 315 aa11.63□□□□□ -0.55
CAPN1-207ENST00000527189 ZNF837Q96EG3 531 aaPredicted RBP11.63□□□□□ -0.55
CAPN1-207ENST00000527189 TXNDC15Q96J42 360 aa11.63□□□□□ -0.55
CAPN1-207ENST00000527189 CCT8L2Q96SF2 557 aa11.63□□□□□ -0.55
CAPN1-207ENST00000527189 ZNF426Q9BUY5 554 aa11.63□□□□□ -0.55
CAPN1-207ENST00000527189 EMC6Q9BV81 110 aa11.63□□□□□ -0.55
CAPN1-207ENST00000527189 POLR2J2Q9GZM3 115 aaKnown RBP11.63□□□□□ -0.55
CAPN1-207ENST00000527189 POLR2J3Q9H1A7 115 aaKnown RBP11.63□□□□□ -0.55
CAPN1-207ENST00000527189 PLK3Q9H4B4 646 aa11.63□□□□□ -0.55
CAPN1-207ENST00000527189 B3GNT2Q9NY97 397 aa11.63□□□□□ -0.55
CAPN1-207ENST00000527189 POFUT2Q9Y2G5 429 aa11.63□□□□□ -0.55
CAPN1-207ENST00000527189 CR1P17927 2039 aa11.63□□□□□ -0.55
CAPN1-207ENST00000527189 BBIP1A8MTZ0 92 aa11.62□□□□□ -0.55
CAPN1-207ENST00000527189 A8MV72 311 aaPredicted RBP11.62□□□□□ -0.55
CAPN1-207ENST00000527189 FBP2O00757 339 aa11.62□□□□□ -0.55
CAPN1-207ENST00000527189 ENTPD5O75356 428 aa11.62□□□□□ -0.55
CAPN1-207ENST00000527189 IGF2P01344 180 aa11.62□□□□□ -0.55
CAPN1-207ENST00000527189 OPN1SWP03999 348 aa11.62□□□□□ -0.55
CAPN1-207ENST00000527189 ADORA3P0DMS8 318 aa11.62□□□□□ -0.55
CAPN1-207ENST00000527189 CD247P20963 164 aa11.62□□□□□ -0.55
CAPN1-207ENST00000527189 CALCRP30988 508 aa11.62□□□□□ -0.55
CAPN1-207ENST00000527189 PPOXP50336 477 aa11.62□□□□□ -0.55
CAPN1-207ENST00000527189 PDLIM4P50479 330 aa11.62□□□□□ -0.55
CAPN1-207ENST00000527189 HGFACQ04756 655 aa11.62□□□□□ -0.55
CAPN1-207ENST00000527189 MAPRE2Q15555 327 aa11.62□□□□□ -0.55
CAPN1-207ENST00000527189 NPTX1Q15818 432 aa11.62□□□□□ -0.55
CAPN1-207ENST00000527189 ZNF74Q16587 644 aa11.62□□□□□ -0.55
CAPN1-207ENST00000527189 TMEM249Q2WGJ8 235 aa11.62□□□□□ -0.55
CAPN1-207ENST00000527189 MMEL1Q495T6 779 aa11.62□□□□□ -0.55
CAPN1-207ENST00000527189 PHYHD1Q5SRE7 291 aa11.62□□□□□ -0.55
CAPN1-207ENST00000527189 ERICH5Q6P6B1 374 aa11.62□□□□□ -0.55
CAPN1-207ENST00000527189 ZNF540Q8NDQ6 660 aa11.62□□□□□ -0.55
CAPN1-207ENST00000527189 OR6N1Q8NGY5 312 aa11.62□□□□□ -0.55
CAPN1-207ENST00000527189 OR6X1Q8NH79 312 aa11.62□□□□□ -0.55
CAPN1-207ENST00000527189 TAMM41Q96BW9 452 aa11.62□□□□□ -0.55
CAPN1-207ENST00000527189 LRRC58Q96CX6 371 aa11.62□□□□□ -0.55
CAPN1-207ENST00000527189 ECSITQ9BQ95 431 aa11.62□□□□□ -0.55
CAPN1-207ENST00000527189 TMEM120AQ9BXJ8 343 aa11.62□□□□□ -0.55
CAPN1-207ENST00000527189 NANSQ9NR45 359 aa11.62□□□□□ -0.55
CAPN1-207ENST00000527189 YAE1D1Q9NRH1 226 aa11.62□□□□□ -0.55
CAPN1-207ENST00000527189 MED29Q9NX70 200 aa11.62□□□□□ -0.55
CAPN1-207ENST00000527189 ZNF229Q9UJW7 825 aa11.62□□□□□ -0.55
CAPN1-207ENST00000527189 FBXL3Q9UKT7 428 aa11.62□□□□□ -0.55
CAPN1-207ENST00000527189 BAG5Q9UL15 447 aa11.62□□□□□ -0.55
CAPN1-207ENST00000527189 ARFGEF3Q5TH69 2177 aa11.62□□□□□ -0.55
CAPN1-207ENST00000527189 CHD3Q12873 2000 aaKnown RBP11.61□□□□□ -0.55
CAPN1-207ENST00000527189 IGHV2OR16-5A0A0B4J2B6 119 aa11.61□□□□□ -0.55
CAPN1-207ENST00000527189 LOC390937A0A1W2PQ73 354 aa11.61□□□□□ -0.55
CAPN1-207ENST00000527189 CPSF4LA6NMK7 179 aaKnown RBP11.61□□□□□ -0.55
CAPN1-207ENST00000527189 LRRN3E7EW58 273 aa11.61□□□□□ -0.55
CAPN1-207ENST00000527189 GPRIN2O60269 458 aa11.61□□□□□ -0.55
CAPN1-207ENST00000527189 LYPD3O95274 346 aa11.61□□□□□ -0.55
CAPN1-207ENST00000527189 IFNA14P01570 189 aa11.61□□□□□ -0.55
CAPN1-207ENST00000527189 THY1P04216 161 aa11.61□□□□□ -0.55
CAPN1-207ENST00000527189 HIST1H2ABP04908 130 aa11.61□□□□□ -0.55
CAPN1-207ENST00000527189 NPR2P20594 1047 aa11.61□□□□□ -0.55
CAPN1-207ENST00000527189 USF1P22415 310 aaPredicted RBP11.61□□□□□ -0.55
CAPN1-207ENST00000527189 CAPZA2P47755 286 aa11.61□□□□□ -0.55
CAPN1-207ENST00000527189 IDH3GP51553 393 aaPredicted RBP11.61□□□□□ -0.55
CAPN1-207ENST00000527189 ARFIP2P53365 341 aa11.61□□□□□ -0.55
CAPN1-207ENST00000527189 CAMK2DQ13557 499 aa11.61□□□□□ -0.55
CAPN1-207ENST00000527189 GSG1Q2KHT4 349 aa11.61□□□□□ -0.55
CAPN1-207ENST00000527189 CARD17Q5XLA6 110 aa11.61□□□□□ -0.55
CAPN1-207ENST00000527189 WDR88Q6ZMY6 472 aa11.61□□□□□ -0.55
CAPN1-207ENST00000527189 ZNF813Q6ZN06 617 aa11.61□□□□□ -0.55
CAPN1-207ENST00000527189 HIST3H2AQ7L7L0 130 aa11.61□□□□□ -0.55
CAPN1-207ENST00000527189 SLC46A3Q7Z3Q1 461 aa11.61□□□□□ -0.55
CAPN1-207ENST00000527189 PIWIL3Q7Z3Z3 882 aaKnown RBP11.61□□□□□ -0.55
CAPN1-207ENST00000527189 MDP1Q86V88 176 aa11.61□□□□□ -0.55
CAPN1-207ENST00000527189 CALHM3Q86XJ0 350 aa11.61□□□□□ -0.55
CAPN1-207ENST00000527189 RBM45Q8IUH3 476 aaKnown RBP11.61□□□□□ -0.55
CAPN1-207ENST00000527189 OR4D11Q8NGI4 311 aa11.61□□□□□ -0.55
CAPN1-207ENST00000527189 HTRA1Q92743 480 aa11.61□□□□□ -0.55
CAPN1-207ENST00000527189 HIST1H2ACQ93077 130 aa11.61□□□□□ -0.55
CAPN1-207ENST00000527189 SORCS2Q96PQ0 1159 aa11.61□□□□□ -0.55
CAPN1-207ENST00000527189 FOXB1Q99853 325 aa11.61□□□□□ -0.55
CAPN1-207ENST00000527189 VRK1Q99986 396 aaPredicted RBP11.61□□□□□ -0.55
CAPN1-207ENST00000527189 ULBP2Q9BZM5 246 aa11.61□□□□□ -0.55
CAPN1-207ENST00000527189 RAB1BQ9H0U4 201 aa11.61□□□□□ -0.55
CAPN1-207ENST00000527189 TMEM160Q9NX00 188 aa11.61□□□□□ -0.55
CAPN1-207ENST00000527189 TAS2R5Q9NYW4 299 aa11.61□□□□□ -0.55
CAPN1-207ENST00000527189 SLC7A7Q9UM01 511 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms