RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 CPNE4Q96A23 557 aaPredicted RBP12.83□□□□□ -0.36
COLCA2-202ENST00000526216 GPR137Q96N19 417 aa12.83□□□□□ -0.36
COLCA2-202ENST00000526216 ZNF385AQ96PM9 386 aaKnown RBP12.83□□□□□ -0.36
COLCA2-202ENST00000526216 EMC6Q9BV81 110 aa12.83□□□□□ -0.36
COLCA2-202ENST00000526216 TEX12Q9BXU0 123 aa12.83□□□□□ -0.36
COLCA2-202ENST00000526216 YTHDF1Q9BYJ9 559 aaKnown RBP12.83□□□□□ -0.36
COLCA2-202ENST00000526216 CLN6Q9NWW5 311 aa12.83□□□□□ -0.36
COLCA2-202ENST00000526216 GRHPRQ9UBQ7 328 aa12.83□□□□□ -0.36
COLCA2-202ENST00000526216 PSORS1C1Q9UIG5 152 aa12.83□□□□□ -0.36
COLCA2-202ENST00000526216 CAMK2AQ9UQM7 478 aa12.83□□□□□ -0.36
COLCA2-202ENST00000526216 NOX1Q9Y5S8 564 aa12.83□□□□□ -0.36
COLCA2-202ENST00000526216 ZNF407Q9C0G0 2248 aa12.83□□□□□ -0.36
COLCA2-202ENST00000526216 SH3D21A4FU49 640 aa12.82□□□□□ -0.36
COLCA2-202ENST00000526216 MAGEA13PA6NCF6 341 aa12.82□□□□□ -0.36
COLCA2-202ENST00000526216 PRR23D1E9PI22 279 aaPredicted RBP12.82□□□□□ -0.36
COLCA2-202ENST00000526216 DCTN6O00399 190 aa12.82□□□□□ -0.36
COLCA2-202ENST00000526216 PRODHO43272 600 aa12.82□□□□□ -0.36
COLCA2-202ENST00000526216 ARHGEF9O43307 516 aa12.82□□□□□ -0.36
COLCA2-202ENST00000526216 AQP8O94778 261 aa12.82□□□□□ -0.36
COLCA2-202ENST00000526216 GYPBP06028 91 aa12.82□□□□□ -0.36
COLCA2-202ENST00000526216 PRR23D2P0DMB1 279 aaPredicted RBP12.82□□□□□ -0.36
COLCA2-202ENST00000526216 DBTP11182 482 aaKnown RBP12.82□□□□□ -0.36
COLCA2-202ENST00000526216 ACVR2AP27037 513 aa12.82□□□□□ -0.36
COLCA2-202ENST00000526216 NTF4P34130 210 aa12.82□□□□□ -0.36
COLCA2-202ENST00000526216 BIDP55957 195 aa12.82□□□□□ -0.36
COLCA2-202ENST00000526216 SLC35A2P78381 396 aa12.82□□□□□ -0.36
COLCA2-202ENST00000526216 MEDAGQ5VYS4 303 aa12.82□□□□□ -0.36
COLCA2-202ENST00000526216 NXNL2Q5VZ03 156 aa12.82□□□□□ -0.36
COLCA2-202ENST00000526216 TMEM225Q6GV28 225 aa12.82□□□□□ -0.36
COLCA2-202ENST00000526216 B3GLCTQ6Y288 498 aa12.82□□□□□ -0.36
COLCA2-202ENST00000526216 FCRLAQ7L513 359 aa12.82□□□□□ -0.36
COLCA2-202ENST00000526216 ADGRE4PQ86SQ3 457 aa12.82□□□□□ -0.36
COLCA2-202ENST00000526216 CISD2Q8N5K1 135 aaKnown RBP12.82□□□□□ -0.36
COLCA2-202ENST00000526216 RNF128Q8TEB7 428 aa12.82□□□□□ -0.36
COLCA2-202ENST00000526216 ZHX1-C8orf76Q96EF9 292 aa12.82□□□□□ -0.36
COLCA2-202ENST00000526216 TSSK2Q96PF2 358 aa12.82□□□□□ -0.36
COLCA2-202ENST00000526216 SIGLEC11Q96RL6 698 aa12.82□□□□□ -0.36
COLCA2-202ENST00000526216 DUSP21Q9H596 190 aa12.82□□□□□ -0.36
COLCA2-202ENST00000526216 ASB6Q9NWX5 421 aa12.82□□□□□ -0.36
COLCA2-202ENST00000526216 VSX1Q9NZR4 365 aaPredicted RBP12.82□□□□□ -0.36
COLCA2-202ENST00000526216 ERVK-18Q9QC07 812 aa12.82□□□□□ -0.36
COLCA2-202ENST00000526216 BOD1L1Q8NFC6 3051 aa12.82□□□□□ -0.36
COLCA2-202ENST00000526216 PRSS37A4D1T9 235 aa12.81□□□□□ -0.36
COLCA2-202ENST00000526216 NPIPA2E9PIF3 369 aa12.81□□□□□ -0.36
COLCA2-202ENST00000526216 NPIPA3F8WFD2 350 aa12.81□□□□□ -0.36
COLCA2-202ENST00000526216 TRMUO75648 421 aaKnown RBP12.81□□□□□ -0.36
COLCA2-202ENST00000526216 VAMP5O95183 116 aa12.81□□□□□ -0.36
COLCA2-202ENST00000526216 BCL10O95999 233 aa12.81□□□□□ -0.36
COLCA2-202ENST00000526216 CRYABP02511 175 aaKnown RBP12.81□□□□□ -0.36
COLCA2-202ENST00000526216 SPI1P17947 270 aa12.81□□□□□ -0.36
COLCA2-202ENST00000526216 DAP3P51398 398 aaKnown RBP12.81□□□□□ -0.36
COLCA2-202ENST00000526216 SLC25A1P53007 311 aa12.81□□□□□ -0.36
COLCA2-202ENST00000526216 SLC16A1P53985 500 aa12.81□□□□□ -0.36
COLCA2-202ENST00000526216 CDH11P55287 796 aa12.81□□□□□ -0.36
COLCA2-202ENST00000526216 GABARAPL2P60520 117 aa12.81□□□□□ -0.36
COLCA2-202ENST00000526216 RPS3AP61247 264 aaKnown RBP12.81□□□□□ -0.36
COLCA2-202ENST00000526216 MVKQ03426 396 aa12.81□□□□□ -0.36
COLCA2-202ENST00000526216 APOFQ13790 326 aa12.81□□□□□ -0.36
COLCA2-202ENST00000526216 PON3Q15166 354 aa12.81□□□□□ -0.36
COLCA2-202ENST00000526216 EEF1A1P5Q5VTE0 462 aa12.81□□□□□ -0.36
COLCA2-202ENST00000526216 JAZF1Q86VZ6 243 aa12.81□□□□□ -0.36
COLCA2-202ENST00000526216 PM20D2Q8IYS1 436 aa12.81□□□□□ -0.36
COLCA2-202ENST00000526216 FNDC9Q8TBE3 224 aa12.81□□□□□ -0.36
COLCA2-202ENST00000526216 ABHD3Q8WU67 409 aa12.81□□□□□ -0.36
COLCA2-202ENST00000526216 OTULINQ96BN8 352 aa12.81□□□□□ -0.36
COLCA2-202ENST00000526216 NMD3Q96D46 503 aaKnown RBP12.81□□□□□ -0.36
COLCA2-202ENST00000526216 Q96MT0 163 aa12.81□□□□□ -0.36
COLCA2-202ENST00000526216 HS3ST6Q96QI5 342 aa12.81□□□□□ -0.36
COLCA2-202ENST00000526216 SNX18Q96RF0 628 aa12.81□□□□□ -0.36
COLCA2-202ENST00000526216 KCNK17Q96T54 332 aa12.81□□□□□ -0.36
COLCA2-202ENST00000526216 SF3B5Q9BWJ5 86 aaKnown RBP12.81□□□□□ -0.36
COLCA2-202ENST00000526216 MRPL13Q9BYD1 178 aaKnown RBP12.81□□□□□ -0.36
COLCA2-202ENST00000526216 TIGARQ9NQ88 270 aa12.81□□□□□ -0.36
COLCA2-202ENST00000526216 CLCF1Q9UBD9 225 aa12.81□□□□□ -0.36
COLCA2-202ENST00000526216 FLVCR1Q9Y5Y0 555 aa12.81□□□□□ -0.36
COLCA2-202ENST00000526216 IGKV1D-43A0A0B4J1Z2 117 aa12.8□□□□□ -0.36
COLCA2-202ENST00000526216 SLC22A23A1A5C7 686 aa12.8□□□□□ -0.36
COLCA2-202ENST00000526216 SLC35F4A4IF30 521 aa12.8□□□□□ -0.36
COLCA2-202ENST00000526216 TRIM64CA6NLI5 447 aa12.8□□□□□ -0.36
COLCA2-202ENST00000526216 CLCA1A8K7I4 914 aa12.8□□□□□ -0.36
COLCA2-202ENST00000526216 ZNF432O94892 652 aa12.8□□□□□ -0.36
COLCA2-202ENST00000526216 APOL3O95236 402 aa12.8□□□□□ -0.36
COLCA2-202ENST00000526216 TGM6O95932 706 aa12.8□□□□□ -0.36
COLCA2-202ENST00000526216 MT-ND2P03891 347 aa12.8□□□□□ -0.36
COLCA2-202ENST00000526216 PGA4P0DJD7 388 aa12.8□□□□□ -0.36
COLCA2-202ENST00000526216 PGA3P0DJD8 388 aa12.8□□□□□ -0.36
COLCA2-202ENST00000526216 ZNF43P17038 809 aa12.8□□□□□ -0.36
COLCA2-202ENST00000526216 HTR1FP30939 366 aa12.8□□□□□ -0.36
COLCA2-202ENST00000526216 PYCR1P32322 319 aa12.8□□□□□ -0.36
COLCA2-202ENST00000526216 CLDN17P56750 224 aa12.8□□□□□ -0.36
COLCA2-202ENST00000526216 FMODQ06828 376 aa12.8□□□□□ -0.36
COLCA2-202ENST00000526216 CAMK2DQ13557 499 aa12.8□□□□□ -0.36
COLCA2-202ENST00000526216 ST3GAL2Q16842 350 aa12.8□□□□□ -0.36
COLCA2-202ENST00000526216 LINC01590Q5TEZ4 76 aa12.8□□□□□ -0.36
COLCA2-202ENST00000526216 FAM180AQ6UWF9 173 aa12.8□□□□□ -0.36
COLCA2-202ENST00000526216 LYPD4Q6UWN0 246 aa12.8□□□□□ -0.36
COLCA2-202ENST00000526216 B3GNT6Q6ZMB0 384 aa12.8□□□□□ -0.36
COLCA2-202ENST00000526216 AHSA2Q719I0 299 aa12.8□□□□□ -0.36
COLCA2-202ENST00000526216 MEPCEQ7L2J0 689 aaKnown RBP12.8□□□□□ -0.36
COLCA2-202ENST00000526216 SHFQ7M4L6 423 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms