RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 TPSB2P20231 275 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 CSRP1P21291 193 aaKnown RBP2.98□□□□□ -1.93
CD44-219ENST00000525685 CD9P21926 228 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 AHCYP23526 432 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 CA5AP35218 305 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 SAA4P35542 130 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 TRIM23P36406 574 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 FDFT1P37268 417 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 COILP38432 576 aaPredicted RBP2.98□□□□□ -1.93
CD44-219ENST00000525685 SPAM1P38567 509 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 GRIA1P42261 906 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 GPR1P46091 355 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 ARRB1P49407 418 aaPredicted RBP2.98□□□□□ -1.93
CD44-219ENST00000525685 NOVA1P51513 510 aaKnown RBP2.98□□□□□ -1.93
CD44-219ENST00000525685 ZNF140P52738 457 aaPredicted RBP2.98□□□□□ -1.93
CD44-219ENST00000525685 HSD17B7P56937 341 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 CTAG1AP78358 180 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 BASP1P80723 227 aaKnown RBP2.98□□□□□ -1.93
CD44-219ENST00000525685 MYBPC1Q00872 1141 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 SRYQ05066 204 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 GABPB1Q06547 395 aaPredicted RBP2.98□□□□□ -1.93
CD44-219ENST00000525685 C2orf54Q08AI8 447 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 CDH17Q12864 832 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 KCNJ11Q14654 390 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 TAF1AQ15573 450 aaPredicted RBP2.98□□□□□ -1.93
CD44-219ENST00000525685 TRIP13Q15645 432 aaPredicted RBP2.98□□□□□ -1.93
CD44-219ENST00000525685 TPSAB1Q15661 275 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 HENMT1Q5T8I9 393 aaKnown RBP2.98□□□□□ -1.93
CD44-219ENST00000525685 HHATQ5VTY9 493 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 LIPKQ5VXJ0 399 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 RNLSQ5VYX0 342 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 ANKRD22Q5VYY1 191 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 PNCKQ6P2M8 343 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 CCDC137Q6PK04 289 aaKnown RBP2.98□□□□□ -1.93
CD44-219ENST00000525685 SYT10Q6XYQ8 523 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 WDR88Q6ZMY6 472 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 DPY19L2P2Q6ZN68 376 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 RANBP3LQ86VV4 465 aaPredicted RBP2.98□□□□□ -1.93
CD44-219ENST00000525685 KRT222Q8N1A0 295 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 SLC25A45Q8N413 288 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 OR52K1Q8NGK4 314 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 OR13C4Q8NGS5 318 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 CCL4L1Q8NHW4 92 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 SUN5Q8TC36 379 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 OR1E3Q8WZA6 343 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 FCGR1BQ92637 280 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 LHX4Q969G2 390 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 MAGOHBQ96A72 148 aaKnown RBP2.98□□□□□ -1.93
CD44-219ENST00000525685 COX14Q96I36 57 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 C16orf45Q96MC5 204 aaPredicted RBP2.98□□□□□ -1.93
CD44-219ENST00000525685 C1orf147Q96MC9 270 aaPredicted RBP2.98□□□□□ -1.93
CD44-219ENST00000525685 SH3GL1Q99961 368 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 FAM173AQ9BQD7 235 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 RIOK2Q9BVS4 552 aaKnown RBP2.98□□□□□ -1.93
CD44-219ENST00000525685 TRABDQ9H4I3 376 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 MRPL40Q9NQ50 206 aaKnown RBP2.98□□□□□ -1.93
CD44-219ENST00000525685 CLEC5AQ9NY25 188 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 IL17CQ9P0M4 197 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 SENP1Q9P0U3 644 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 SPASTQ9UBP0 616 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 PRODH2Q9UF12 536 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 APOBEC3BQ9UH17 382 aaKnown RBP2.98□□□□□ -1.93
CD44-219ENST00000525685 BCAP29Q9UHQ4 241 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 SLC17A4Q9Y2C5 497 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 NAALAD2Q9Y3Q0 740 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 PCYT1BQ9Y5K3 369 aaPredicted RBP2.98□□□□□ -1.93
CD44-219ENST00000525685 ARL5AQ9Y689 179 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 SAR1BQ9Y6B6 198 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 COL27A1Q8IZC6 1860 aaPredicted RBP2.98□□□□□ -1.93
CD44-219ENST00000525685 TRPM6Q9BX84 2022 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 MUC6Q6W4X9 2439 aa2.98□□□□□ -1.93
CD44-219ENST00000525685 A0A0A6YYD4 124 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 GLYATL1P3A0A0U1RQE8 302 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 A0A0U1RRA0 63 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 SPAARA0A1B0GVQ0 90 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 OR51F1A6NGY5 319 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 STX7O15400 261 aaKnown RBP2.97□□□□□ -1.93
CD44-219ENST00000525685 AQP9O43315 295 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 SSX5O60225 188 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 DFNA5O60443 496 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 MTX2O75431 263 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 ERLIN1O75477 346 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 B3GALNT1O75752 331 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 VENTXO95231 258 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 ECDO95905 644 aaPredicted RBP2.97□□□□□ -1.93
CD44-219ENST00000525685 MT-ATP6P00846 226 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 TNFP01375 233 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 THY1P04216 161 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 IVLP07476 585 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 RPS2P15880 293 aaKnown RBP2.97□□□□□ -1.93
CD44-219ENST00000525685 BCL3P20749 454 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 FOXN2P32314 431 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 HPDP32754 393 aaPredicted RBP2.97□□□□□ -1.93
CD44-219ENST00000525685 MAGEA4P43358 317 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 MAGEA6P43360 314 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 GNPDA1P46926 289 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 ACADVLP49748 655 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 XIAPP98170 497 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 ACVR1Q04771 509 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 DNAJC3Q13217 504 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms