RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 RNF6Q9Y252 685 aa14.09□□□□□ -0.15
TSPAN4-213ENST00000524895 CACNA1BQ00975 2339 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 SLC35F4A4IF30 521 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 ZNF724A8MTY0 619 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 ARHGEF9O43307 516 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 PRKYO43930 277 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 MPZL2O60487 215 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 YES1P07947 543 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 PAICSP22234 425 aaKnown RBP14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 MYF6P23409 242 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 CASP6P55212 293 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 TMEM201Q5SNT2 666 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 LEG1Q6P5S2 330 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 NHLRC1Q6VVB1 395 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 B3GNT6Q6ZMB0 384 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 C3P1Q6ZMU1 363 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 DOLPP1Q86YN1 238 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 TUSC5Q8IXB3 177 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 ENTHD1Q8IYW4 607 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 ZIC4Q8N9L1 334 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 C9orf106Q8NAJ2 232 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 OR8J1Q8NGP2 316 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 OR6X1Q8NH79 312 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 TMEM163Q8TC26 289 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 TRUB1Q8WWH5 349 aaKnown RBP14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 OTULINQ96BN8 352 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 GMPPAQ96IJ6 420 aaPredicted RBP14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 IL4I1Q96RQ9 567 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 BCO1Q9HAY6 547 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 GP6Q9HCN6 339 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 GLRX2Q9NS18 164 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 RASSF1Q9NS23 344 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 SH3BGRL2Q9UJC5 107 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 TINAGQ9UJW2 476 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 ING1Q9UK53 422 aaPredicted RBP14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 RCE1Q9Y256 329 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 GPR52Q9Y2T5 361 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 NOSIPQ9Y314 301 aaKnown RBP14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 LRRC42Q9Y546 428 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 FAM215AQ9Y5M1 114 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 HSPE1-MOB4S4R3N1 261 aa14.08□□□□□ -0.16
TSPAN4-213ENST00000524895 MBD3L4A6NDZ8 208 aaPredicted RBP14.07□□□□□ -0.16
TSPAN4-213ENST00000524895 MBD3L3A6NE82 208 aaPredicted RBP14.07□□□□□ -0.16
TSPAN4-213ENST00000524895 MBD3L5A6NJ08 208 aaPredicted RBP14.07□□□□□ -0.16
TSPAN4-213ENST00000524895 H7C1C5 153 aa14.07□□□□□ -0.16
TSPAN4-213ENST00000524895 DENRO43583 198 aaKnown RBP14.07□□□□□ -0.16
TSPAN4-213ENST00000524895 TLX2O43763 284 aaPredicted RBP14.07□□□□□ -0.16
TSPAN4-213ENST00000524895 SS18L1O75177 396 aaPredicted RBP14.07□□□□□ -0.16
TSPAN4-213ENST00000524895 RENP00797 406 aa14.07□□□□□ -0.16
TSPAN4-213ENST00000524895 IGHG1P01857 330 aa14.07□□□□□ -0.16
TSPAN4-213ENST00000524895 ACADSP16219 412 aa14.07□□□□□ -0.16
TSPAN4-213ENST00000524895 PER3P56645 1201 aa14.07□□□□□ -0.16
TSPAN4-213ENST00000524895 CLRN1P58418 232 aa14.07□□□□□ -0.16
TSPAN4-213ENST00000524895 LCN6P62502 163 aa14.07□□□□□ -0.16
TSPAN4-213ENST00000524895 CRMP1Q14194 572 aa14.07□□□□□ -0.16
TSPAN4-213ENST00000524895 CARD17Q5XLA6 110 aa14.07□□□□□ -0.16
TSPAN4-213ENST00000524895 RTL6Q6ICC9 239 aa14.07□□□□□ -0.16
TSPAN4-213ENST00000524895 KRT80Q6KB66 452 aa14.07□□□□□ -0.16
TSPAN4-213ENST00000524895 NIPAL3Q6P499 406 aa14.07□□□□□ -0.16
TSPAN4-213ENST00000524895 AAED1Q7RTV5 226 aa14.07□□□□□ -0.16
TSPAN4-213ENST00000524895 THAP5Q7Z6K1 395 aa14.07□□□□□ -0.16
TSPAN4-213ENST00000524895 CYB561A3Q8NBI2 242 aa14.07□□□□□ -0.16
TSPAN4-213ENST00000524895 SLC37A3Q8NCC5 494 aa14.07□□□□□ -0.16
TSPAN4-213ENST00000524895 MBD3L2Q8NHZ7 208 aaPredicted RBP14.07□□□□□ -0.16
TSPAN4-213ENST00000524895 UBE2FQ969M7 185 aa14.07□□□□□ -0.16
TSPAN4-213ENST00000524895 ZNF566Q969W8 418 aa14.07□□□□□ -0.16
TSPAN4-213ENST00000524895 TMEM45BQ96B21 275 aa14.07□□□□□ -0.16
TSPAN4-213ENST00000524895 SLC25A44Q96H78 314 aaPredicted RBP14.07□□□□□ -0.16
TSPAN4-213ENST00000524895 BBC3Q96PG8 261 aaPredicted RBP14.07□□□□□ -0.16
TSPAN4-213ENST00000524895 OR2M2Q96R28 347 aa14.07□□□□□ -0.16
TSPAN4-213ENST00000524895 NMNAT3Q96T66 252 aa14.07□□□□□ -0.16
TSPAN4-213ENST00000524895 ZNF226Q9NYT6 803 aa14.07□□□□□ -0.16
TSPAN4-213ENST00000524895 PRSS37A4D1T9 235 aa14.06□□□□□ -0.16
TSPAN4-213ENST00000524895 FAM183AA6NL82 134 aa14.06□□□□□ -0.16
TSPAN4-213ENST00000524895 PRR23D1E9PI22 279 aaPredicted RBP14.06□□□□□ -0.16
TSPAN4-213ENST00000524895 SLC43A1O75387 559 aa14.06□□□□□ -0.16
TSPAN4-213ENST00000524895 MRPL33O75394 65 aaKnown RBP14.06□□□□□ -0.16
TSPAN4-213ENST00000524895 TRMUO75648 421 aaKnown RBP14.06□□□□□ -0.16
TSPAN4-213ENST00000524895 PRR23D2P0DMB1 279 aaPredicted RBP14.06□□□□□ -0.16
TSPAN4-213ENST00000524895 AGTR1P30556 359 aa14.06□□□□□ -0.16
TSPAN4-213ENST00000524895 CDKN2AP42771 156 aaKnown RBP14.06□□□□□ -0.16
TSPAN4-213ENST00000524895 SELENOPP49908 381 aa14.06□□□□□ -0.16
TSPAN4-213ENST00000524895 SNRPGP62308 76 aaKnown RBP14.06□□□□□ -0.16
TSPAN4-213ENST00000524895 RUNX1T1Q06455 604 aa14.06□□□□□ -0.16
TSPAN4-213ENST00000524895 CD47Q08722 323 aa14.06□□□□□ -0.16
TSPAN4-213ENST00000524895 ITGADQ13349 1161 aa14.06□□□□□ -0.16
TSPAN4-213ENST00000524895 MED21Q13503 144 aa14.06□□□□□ -0.16
TSPAN4-213ENST00000524895 CAMK2DQ13557 499 aa14.06□□□□□ -0.16
TSPAN4-213ENST00000524895 MAD2L1BPQ15013 274 aaPredicted RBP14.06□□□□□ -0.16
TSPAN4-213ENST00000524895 PLBD1Q6P4A8 553 aa14.06□□□□□ -0.16
TSPAN4-213ENST00000524895 CXXC5Q7LFL8 322 aaKnown RBP14.06□□□□□ -0.16
TSPAN4-213ENST00000524895 WDFY1Q8IWB7 410 aa14.06□□□□□ -0.16
TSPAN4-213ENST00000524895 GCNT2Q8N0V5 402 aa14.06□□□□□ -0.16
TSPAN4-213ENST00000524895 SYT14Q8NB59 555 aa14.06□□□□□ -0.16
TSPAN4-213ENST00000524895 NOXO1Q8NFA2 376 aa14.06□□□□□ -0.16
TSPAN4-213ENST00000524895 HDAC2Q92769 488 aaKnown RBP14.06□□□□□ -0.16
TSPAN4-213ENST00000524895 SNX18Q96RF0 628 aa14.06□□□□□ -0.16
TSPAN4-213ENST00000524895 ALG12Q9BV10 488 aa14.06□□□□□ -0.16
TSPAN4-213ENST00000524895 FN3KQ9H479 309 aa14.06□□□□□ -0.16
TSPAN4-213ENST00000524895 PARPBPQ9NWS1 579 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms