RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 TRAV14DV4A0A0A6YYC5 116 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 NDUFB2O95178 105 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 SLC35G6P0C7Q6 338 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 TYRP1P17643 537 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 MC2RQ01718 297 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 ZNF169Q14929 603 aaPredicted RBP12□□□□□ -0.49
CAPN1-202ENST00000524773 NKPD1Q17RQ9 610 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 FHL5Q5TD97 284 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 NUDT18Q6ZVK8 323 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 SLC35D2Q76EJ3 337 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 OR5AK2Q8NH90 309 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 OR14C36Q8NHC7 312 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 BADQ92934 168 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 TSACCQ96A04 125 aaPredicted RBP12□□□□□ -0.49
CAPN1-202ENST00000524773 MIB2Q96AX9 1013 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 CYYR1Q96J86 154 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 SPACA7Q96KW9 195 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 TEX101Q9BY14 249 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 HPF1Q9NWY4 346 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 LRIT1Q9P2V4 623 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 LINC01387J3KSC0 135 aa11.99□□□□□ -0.49
CAPN1-202ENST00000524773 B3GALT2O43825 422 aa11.99□□□□□ -0.49
CAPN1-202ENST00000524773 BRINP1O60477 761 aa11.99□□□□□ -0.49
CAPN1-202ENST00000524773 GLSO94925 669 aaPredicted RBP11.99□□□□□ -0.49
CAPN1-202ENST00000524773 HPP00738 406 aa11.99□□□□□ -0.49
CAPN1-202ENST00000524773 RPS4Y1P22090 263 aaKnown RBP11.99□□□□□ -0.49
CAPN1-202ENST00000524773 BAMBIQ13145 260 aa11.99□□□□□ -0.49
CAPN1-202ENST00000524773 TAF13Q15543 124 aa11.99□□□□□ -0.49
CAPN1-202ENST00000524773 SCGB2B2Q4G0G5 96 aa11.99□□□□□ -0.49
CAPN1-202ENST00000524773 OLFML2AQ68BL7 652 aa11.99□□□□□ -0.49
CAPN1-202ENST00000524773 DPY19L4Q7Z388 723 aa11.99□□□□□ -0.49
CAPN1-202ENST00000524773 ZNF546Q86UE3 836 aa11.99□□□□□ -0.49
CAPN1-202ENST00000524773 LINC00518Q8N0U6 118 aa11.99□□□□□ -0.49
CAPN1-202ENST00000524773 TMEM185AQ8NFB2 350 aa11.99□□□□□ -0.49
CAPN1-202ENST00000524773 GAL3ST3Q96A11 431 aa11.99□□□□□ -0.49
CAPN1-202ENST00000524773 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.99□□□□□ -0.49
CAPN1-202ENST00000524773 TINAGL1Q9GZM7 467 aaPredicted RBP11.99□□□□□ -0.49
CAPN1-202ENST00000524773 DNAJB12Q9NXW2 375 aaKnown RBP11.99□□□□□ -0.49
CAPN1-202ENST00000524773 AKAP7Q9P0M2 348 aaPredicted RBP11.99□□□□□ -0.49
CAPN1-202ENST00000524773 ENTPD2Q9Y5L3 495 aa11.99□□□□□ -0.49
CAPN1-202ENST00000524773 ARHGEF17Q96PE2 2063 aaPredicted RBP11.99□□□□□ -0.49
CAPN1-202ENST00000524773 POM121BA6NF01 834 aa11.99□□□□□ -0.49
CAPN1-202ENST00000524773 C1QTNF3-AMACRE9PGA6 284 aa11.99□□□□□ -0.49
CAPN1-202ENST00000524773 ALOX12BO75342 701 aa11.99□□□□□ -0.49
CAPN1-202ENST00000524773 C4BPBP20851 252 aa11.99□□□□□ -0.49
CAPN1-202ENST00000524773 CENPAP49450 140 aa11.99□□□□□ -0.49
CAPN1-202ENST00000524773 SERTAD2Q14140 314 aa11.99□□□□□ -0.49
CAPN1-202ENST00000524773 GAS6Q14393 721 aa11.99□□□□□ -0.49
CAPN1-202ENST00000524773 FCRL6Q6DN72 434 aa11.99□□□□□ -0.49
CAPN1-202ENST00000524773 UNQ6126/PRO20091Q6UXV3 157 aa11.99□□□□□ -0.49
CAPN1-202ENST00000524773 BAIAP2L2Q6UXY1 529 aa11.99□□□□□ -0.49
CAPN1-202ENST00000524773 CBLN2Q8IUK8 224 aa11.99□□□□□ -0.49
CAPN1-202ENST00000524773 SYS1Q8N2H4 156 aa11.99□□□□□ -0.49
CAPN1-202ENST00000524773 ZNF676Q8N7Q3 588 aa11.99□□□□□ -0.49
CAPN1-202ENST00000524773 PXT1Q8NFP0 134 aa11.99□□□□□ -0.49
CAPN1-202ENST00000524773 OR4C3Q8NH37 302 aa11.99□□□□□ -0.49
CAPN1-202ENST00000524773 FAM174AQ8TBP5 190 aa11.99□□□□□ -0.49
CAPN1-202ENST00000524773 ZNF524Q96C55 264 aa11.99□□□□□ -0.49
CAPN1-202ENST00000524773 MOGAT1Q96PD6 335 aa11.99□□□□□ -0.49
CAPN1-202ENST00000524773 SRMSQ9H3Y6 488 aa11.99□□□□□ -0.49
CAPN1-202ENST00000524773 ITGA10O75578 1167 aa11.98□□□□□ -0.49
CAPN1-202ENST00000524773 ITGA5P08648 1049 aa11.98□□□□□ -0.49
CAPN1-202ENST00000524773 LINC00271P0C7V0 271 aa11.98□□□□□ -0.49
CAPN1-202ENST00000524773 ARFIP1P53367 373 aa11.98□□□□□ -0.49
CAPN1-202ENST00000524773 RBMS2Q15434 407 aaKnown RBP11.98□□□□□ -0.49
CAPN1-202ENST00000524773 NKD1Q969G9 470 aa11.98□□□□□ -0.49
CAPN1-202ENST00000524773 TMEM231Q9H6L2 316 aa11.98□□□□□ -0.49
CAPN1-202ENST00000524773 RXFP3Q9NSD7 469 aa11.98□□□□□ -0.49
CAPN1-202ENST00000524773 ERVK-19Q9WJR5 959 aa11.98□□□□□ -0.49
CAPN1-202ENST00000524773 NAP1L6A6NFF2 107 aa11.98□□□□□ -0.49
CAPN1-202ENST00000524773 OR6C65A6NJZ3 312 aa11.98□□□□□ -0.49
CAPN1-202ENST00000524773 ZNF28P17035 718 aa11.98□□□□□ -0.49
CAPN1-202ENST00000524773 MPGP29372 298 aa11.98□□□□□ -0.49
CAPN1-202ENST00000524773 TLX1P31314 330 aaPredicted RBP11.98□□□□□ -0.49
CAPN1-202ENST00000524773 POU3F4P49335 361 aa11.98□□□□□ -0.49
CAPN1-202ENST00000524773 ADPRHP54922 357 aa11.98□□□□□ -0.49
CAPN1-202ENST00000524773 POU4F2Q12837 409 aa11.98□□□□□ -0.49
CAPN1-202ENST00000524773 NKAIN2Q5VXU1 208 aa11.98□□□□□ -0.49
CAPN1-202ENST00000524773 RPL13AP3Q6NVV1 102 aa11.98□□□□□ -0.49
CAPN1-202ENST00000524773 ZNF627Q7L945 461 aa11.98□□□□□ -0.49
CAPN1-202ENST00000524773 LRRTM1Q86UE6 522 aa11.98□□□□□ -0.49
CAPN1-202ENST00000524773 GALNT16Q8N428 558 aa11.98□□□□□ -0.49
CAPN1-202ENST00000524773 MRPL43Q8N983 215 aaKnown RBP11.98□□□□□ -0.49
CAPN1-202ENST00000524773 OR4S1Q8NGB4 309 aa11.98□□□□□ -0.49
CAPN1-202ENST00000524773 OR1J2Q8NGS2 313 aa11.98□□□□□ -0.49
CAPN1-202ENST00000524773 OR6N2Q8NGY6 317 aa11.98□□□□□ -0.49
CAPN1-202ENST00000524773 WFIKKN2Q8TEU8 576 aa11.98□□□□□ -0.49
CAPN1-202ENST00000524773 ASB12Q8WXK4 309 aa11.98□□□□□ -0.49
CAPN1-202ENST00000524773 PHPT1Q9NRX4 125 aaPredicted RBP11.98□□□□□ -0.49
CAPN1-202ENST00000524773 STEAP1Q9UHE8 339 aa11.98□□□□□ -0.49
CAPN1-202ENST00000524773 SERTAD3Q9UJW9 196 aa11.98□□□□□ -0.49
CAPN1-202ENST00000524773 SLC22A13Q9Y226 551 aa11.98□□□□□ -0.49
CAPN1-202ENST00000524773 SLC6A5Q9Y345 797 aa11.98□□□□□ -0.49
CAPN1-202ENST00000524773 SLC22A7Q9Y694 548 aa11.98□□□□□ -0.49
CAPN1-202ENST00000524773 A0A1W2PQU0 124 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 STARP49675 285 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 EPHA4P54764 986 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 SRSF3P84103 164 aaKnown RBP11.97□□□□□ -0.49
CAPN1-202ENST00000524773 PSG6Q00889 435 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 IL10RAQ13651 578 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms