RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 FBXO7Q9Y3I1 522 aa3.94□□□□□ -1.78
SKP1-211ENST00000523359 ZNF175Q9Y473 711 aa3.94□□□□□ -1.78
SKP1-211ENST00000523359 TSSC4Q9Y5U2 329 aaPredicted RBP3.94□□□□□ -1.78
SKP1-211ENST00000523359 CACNG2Q9Y698 323 aa3.94□□□□□ -1.78
SKP1-211ENST00000523359 RPAP1Q9BWH6 1393 aaPredicted RBP3.93□□□□□ -1.78
SKP1-211ENST00000523359 TRBV9A0A0B4J1U6 114 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 A0A1W2PRD5 423 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 ERI2A8K979 691 aaKnown RBP3.93□□□□□ -1.78
SKP1-211ENST00000523359 SMLR1H3BR10 107 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 CLDN34H7C241 214 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 TOXO94900 526 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 TMEM50AO95807 157 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 ACTL6AO96019 429 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 HOXD4P09016 255 aaPredicted RBP3.93□□□□□ -1.78
SKP1-211ENST00000523359 HSMCR30P0CW71 290 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 CBR1P16152 277 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 CTRB1P17538 263 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 TSPAN8P19075 237 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 SYT1P21579 422 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 HSD11B1P28845 292 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 CEACAM3P40198 252 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 AQP2P41181 271 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 CSKP41240 450 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 CAPZBP47756 277 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 SGSHP51688 502 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 PSMD4P55036 377 aaKnown RBP3.93□□□□□ -1.78
SKP1-211ENST00000523359 AP3S2P59780 193 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 ERVS71-1P61550 626 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 ARF6P62330 175 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 PITPNAQ00169 270 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 MADCAM1Q13477 382 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 SPCS2Q15005 226 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 TNXAQ16473 311 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 C9orf66Q5T8R8 295 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 CTRB2Q6GPI1 263 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 CWC27Q6UX04 472 aaKnown RBP3.93□□□□□ -1.78
SKP1-211ENST00000523359 ZNF562Q6V9R5 426 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 NET1Q7Z628 596 aaPredicted RBP3.93□□□□□ -1.78
SKP1-211ENST00000523359 CCDC71Q8IV32 467 aaPredicted RBP3.93□□□□□ -1.78
SKP1-211ENST00000523359 GID4Q8IVV7 300 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 TMEM156Q8N614 296 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 C4orf32Q8N8J7 132 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 C19orf18Q8NEA5 215 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 OR5D18Q8NGL1 313 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 OR4Q3Q8NH05 313 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 OR52E5Q8NH55 327 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 OR6X1Q8NH79 312 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 LGALS14Q8TCE9 139 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 MRAPQ8TCY5 172 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 FAM222BQ8WU58 562 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 PIH1D2Q8WWB5 315 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 TAF15Q92804 592 aaKnown RBP eCLIP3.93□□□□□ -1.78
SKP1-211ENST00000523359 PNPLA2Q96AD5 504 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 CEP19Q96LK0 163 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 SERPINB11Q96P15 392 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 KCNA7Q96RP8 456 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 CYP2S1Q96SQ9 504 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 NAPGQ99747 312 aaPredicted RBP3.93□□□□□ -1.78
SKP1-211ENST00000523359 KIR3DX1Q9H7L2 352 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 MRPL40Q9NQ50 206 aaKnown RBP3.93□□□□□ -1.78
SKP1-211ENST00000523359 INPP5EQ9NRR6 644 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 ZNF282Q9UDV7 671 aaPredicted RBP3.93□□□□□ -1.78
SKP1-211ENST00000523359 RARRES3Q9UL19 164 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 TBL2Q9Y4P3 447 aaKnown RBP3.93□□□□□ -1.78
SKP1-211ENST00000523359 MYO15BQ96JP2 1530 aa3.93□□□□□ -1.78
SKP1-211ENST00000523359 AQRO60306 1485 aaKnown RBP eCLIP3.92□□□□□ -1.78
SKP1-211ENST00000523359 TEX48A0A1B0GUV7 120 aa3.92□□□□□ -1.78
SKP1-211ENST00000523359 LRP5LA4QPB2 252 aa3.92□□□□□ -1.78
SKP1-211ENST00000523359 ARGFXA6NJG6 315 aa3.92□□□□□ -1.78
SKP1-211ENST00000523359 RPL37AP8A6NKH3 93 aa3.92□□□□□ -1.78
SKP1-211ENST00000523359 GOLGA6L19H0YKK7 550 aa3.92□□□□□ -1.78
SKP1-211ENST00000523359 H3BN98 237 aa3.92□□□□□ -1.78
SKP1-211ENST00000523359 IMPA2O14732 288 aa3.92□□□□□ -1.78
SKP1-211ENST00000523359 GATCO43716 136 aaKnown RBP3.92□□□□□ -1.78
SKP1-211ENST00000523359 AIREO43918 545 aa3.92□□□□□ -1.78
SKP1-211ENST00000523359 PFKFB2O60825 505 aa3.92□□□□□ -1.78
SKP1-211ENST00000523359 RAMP3O60896 148 aa3.92□□□□□ -1.78
SKP1-211ENST00000523359 HUS1O60921 280 aa3.92□□□□□ -1.78
SKP1-211ENST00000523359 ENTPD5O75356 428 aa3.92□□□□□ -1.78
SKP1-211ENST00000523359 RAB3DO95716 219 aa3.92□□□□□ -1.78
SKP1-211ENST00000523359 ALDOBP05062 364 aa3.92□□□□□ -1.78
SKP1-211ENST00000523359 KRT16P08779 473 aa3.92□□□□□ -1.78
SKP1-211ENST00000523359 OR4E1P0C645 316 aa3.92□□□□□ -1.78
SKP1-211ENST00000523359 SLC35G4P0C7Q5 338 aa3.92□□□□□ -1.78
SKP1-211ENST00000523359 MBL2P11226 248 aaPredicted RBP3.92□□□□□ -1.78
SKP1-211ENST00000523359 CD1CP29017 333 aa3.92□□□□□ -1.78
SKP1-211ENST00000523359 EPHX2P34913 555 aa3.92□□□□□ -1.78
SKP1-211ENST00000523359 PCK1P35558 622 aa3.92□□□□□ -1.78
SKP1-211ENST00000523359 MATKP42679 507 aa3.92□□□□□ -1.78
SKP1-211ENST00000523359 PGFP49763 221 aa3.92□□□□□ -1.78
SKP1-211ENST00000523359 PRELPP51888 382 aa3.92□□□□□ -1.78
SKP1-211ENST00000523359 RIPK4P57078 832 aa3.92□□□□□ -1.78
SKP1-211ENST00000523359 KCNJ2P63252 427 aa3.92□□□□□ -1.78
SKP1-211ENST00000523359 REEP5Q00765 189 aa3.92□□□□□ -1.78
SKP1-211ENST00000523359 EWSR1Q01844 656 aaKnown RBP eCLIP3.92□□□□□ -1.78
SKP1-211ENST00000523359 KLRC3Q07444 240 aa3.92□□□□□ -1.78
SKP1-211ENST00000523359 IFFO1Q0D2I5 559 aa3.92□□□□□ -1.78
SKP1-211ENST00000523359 SMARCB1Q12824 385 aa3.92□□□□□ -1.78
SKP1-211ENST00000523359 KLRB1Q12918 225 aa3.92□□□□□ -1.78
SKP1-211ENST00000523359 TFDP1Q14186 410 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms