RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 C10orf53Q8N6V4 93 aa9.51□□□□□ -0.89
PVT1-216ENST00000523068 RNF148Q8N7C7 305 aa9.51□□□□□ -0.89
PVT1-216ENST00000523068 FAM169BQ8N8A8 192 aa9.51□□□□□ -0.89
PVT1-216ENST00000523068 BCL2L2Q92843 193 aaPredicted RBP9.51□□□□□ -0.89
PVT1-216ENST00000523068 SLC41A3Q96GZ6 507 aa9.51□□□□□ -0.89
PVT1-216ENST00000523068 RSRC1Q96IZ7 334 aaKnown RBP9.51□□□□□ -0.89
PVT1-216ENST00000523068 ECSITQ9BQ95 431 aa9.51□□□□□ -0.89
PVT1-216ENST00000523068 RHNO1Q9BSD3 238 aa9.51□□□□□ -0.89
PVT1-216ENST00000523068 KATNB1Q9BVA0 655 aa9.51□□□□□ -0.89
PVT1-216ENST00000523068 PRR14Q9BWN1 585 aa9.51□□□□□ -0.89
PVT1-216ENST00000523068 DENND2DQ9H6A0 471 aaPredicted RBP9.51□□□□□ -0.89
PVT1-216ENST00000523068 NANOGQ9H9S0 305 aa9.51□□□□□ -0.89
PVT1-216ENST00000523068 B3GAT2Q9NPZ5 323 aa9.51□□□□□ -0.89
PVT1-216ENST00000523068 MRPL39Q9NYK5 338 aaKnown RBP9.51□□□□□ -0.89
PVT1-216ENST00000523068 CRNNQ9UBG3 495 aaPredicted RBP9.51□□□□□ -0.89
PVT1-216ENST00000523068 MOKQ9UQ07 419 aa9.51□□□□□ -0.89
PVT1-216ENST00000523068 POMPQ9Y244 141 aa9.51□□□□□ -0.89
PVT1-216ENST00000523068 A0A096LPE4 126 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 IGHV1-18A0A0C4DH31 117 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 A0A1W2PPZ6 126 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 ZNF99A8MXY4 864 aaPredicted RBP9.5□□□□□ -0.89
PVT1-216ENST00000523068 ATP6V1G2-DDX39BF2Z307 99 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 MS4A18H0YCH9 400 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 M0R3H8 397 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 NME4O00746 187 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 TRAF3IP2O43734 574 aaPredicted RBP9.5□□□□□ -0.89
PVT1-216ENST00000523068 TPST2O60704 377 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 NDUFS7O75251 213 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 FKBP6O75344 327 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 ATP6V1G2O95670 118 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 BGLAPP02818 100 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 OPN1SWP03999 348 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 HSD17B1P14061 328 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 PCSK6P29122 969 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 PCGF2P35227 344 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 POU3F1Q03052 451 aaPredicted RBP9.5□□□□□ -0.89
PVT1-216ENST00000523068 LIPEQ05469 1076 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 PUDPQ08623 228 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 TRIM25Q14258 630 aaKnown RBP9.5□□□□□ -0.89
PVT1-216ENST00000523068 SNCBQ16143 134 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 VMACQ2NL98 169 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 MS4A18Q3C1V0 323 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 RABL3Q5HYI8 236 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 ENTPD8Q5MY95 495 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 CLEC2AQ6UVW9 174 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 PXKQ7Z7A4 578 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 TMEM123Q8N131 208 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 OR4F15Q8NGB8 312 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 OR6T1Q8NGN1 323 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 OR10A6Q8NH74 314 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 LRR1Q96L50 414 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 OR2M2Q96R28 347 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 CRLF2Q9HC73 371 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 GPR35Q9HC97 309 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 CMTM6Q9NX76 183 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 FBXO9Q9UK97 447 aaPredicted RBP9.5□□□□□ -0.89
PVT1-216ENST00000523068 NOX1Q9Y5S8 564 aa9.5□□□□□ -0.89
PVT1-216ENST00000523068 CHD3Q12873 2000 aaKnown RBP9.49□□□□□ -0.89
PVT1-216ENST00000523068 TRAPPC13A5PLN9 417 aa9.49□□□□□ -0.89
PVT1-216ENST00000523068 ZNF726A6NNF4 738 aa9.49□□□□□ -0.89
PVT1-216ENST00000523068 VSTM5A8MXK1 200 aa9.49□□□□□ -0.89
PVT1-216ENST00000523068 FAM220BPB1ANY3 271 aa9.49□□□□□ -0.89
PVT1-216ENST00000523068 GSTA4O15217 222 aa9.49□□□□□ -0.89
PVT1-216ENST00000523068 OR6A2O95222 327 aa9.49□□□□□ -0.89
PVT1-216ENST00000523068 IGKV3-15P01624 115 aa9.49□□□□□ -0.89
PVT1-216ENST00000523068 CSF3P09919 207 aa9.49□□□□□ -0.89
PVT1-216ENST00000523068 CD247P20963 164 aa9.49□□□□□ -0.89
PVT1-216ENST00000523068 AHCYP23526 432 aa9.49□□□□□ -0.89
PVT1-216ENST00000523068 ARR3P36575 388 aa9.49□□□□□ -0.89
PVT1-216ENST00000523068 GSK3BP49841 420 aa9.49□□□□□ -0.89
PVT1-216ENST00000523068 SNRPD2P62316 118 aaKnown RBP9.49□□□□□ -0.89
PVT1-216ENST00000523068 ARF1P84077 181 aaKnown RBP9.49□□□□□ -0.89
PVT1-216ENST00000523068 CEACAM16Q2WEN9 425 aa9.49□□□□□ -0.89
PVT1-216ENST00000523068 TTC33Q6PID6 262 aaPredicted RBP9.49□□□□□ -0.89
PVT1-216ENST00000523068 LINC00114Q6XXX2 140 aa9.49□□□□□ -0.89
PVT1-216ENST00000523068 SPATA24Q86W54 205 aa9.49□□□□□ -0.89
PVT1-216ENST00000523068 DHFR2Q86XF0 187 aa9.49□□□□□ -0.89
PVT1-216ENST00000523068 MAPK1IP1LQ8NDC0 245 aa9.49□□□□□ -0.89
PVT1-216ENST00000523068 IL17RDQ8NFM7 739 aa9.49□□□□□ -0.89
PVT1-216ENST00000523068 GPR32P1Q8NGA4 272 aa9.49□□□□□ -0.89
PVT1-216ENST00000523068 OR5J2Q8NH18 312 aa9.49□□□□□ -0.89
PVT1-216ENST00000523068 VANGL1Q8TAA9 524 aaPredicted RBP9.49□□□□□ -0.89
PVT1-216ENST00000523068 ADAMTS16Q8TE57 1224 aa9.49□□□□□ -0.89
PVT1-216ENST00000523068 MPP4Q96JB8 637 aa9.49□□□□□ -0.89
PVT1-216ENST00000523068 MOGAT1Q96PD6 335 aa9.49□□□□□ -0.89
PVT1-216ENST00000523068 WFDC6Q9BQY6 131 aa9.49□□□□□ -0.89
PVT1-216ENST00000523068 PCDHAC1Q9H158 963 aa9.49□□□□□ -0.89
PVT1-216ENST00000523068 NELFAQ9H3P2 528 aa9.49□□□□□ -0.89
PVT1-216ENST00000523068 CA10Q9NS85 328 aa9.49□□□□□ -0.89
PVT1-216ENST00000523068 CD300AQ9UGN4 299 aa9.49□□□□□ -0.89
PVT1-216ENST00000523068 MAGEL2Q9UJ55 1249 aa9.49□□□□□ -0.89
PVT1-216ENST00000523068 USP22Q9UPT9 525 aa9.49□□□□□ -0.89
PVT1-216ENST00000523068 SNX13Q9Y5W8 968 aa9.49□□□□□ -0.89
PVT1-216ENST00000523068 ZANQ9Y493 2812 aa9.49□□□□□ -0.89
PVT1-216ENST00000523068 ARFGEF3Q5TH69 2177 aa9.48□□□□□ -0.89
PVT1-216ENST00000523068 YLPM1P49750 1951 aaKnown RBP9.48□□□□□ -0.89
PVT1-216ENST00000523068 SLC35F4A4IF30 521 aa9.48□□□□□ -0.89
PVT1-216ENST00000523068 CPSF4LA6NMK7 179 aaKnown RBP9.48□□□□□ -0.89
PVT1-216ENST00000523068 B9A039 149 aa9.48□□□□□ -0.89
PVT1-216ENST00000523068 INAFM1C9JVW0 142 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms