RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 EFNA2O43921 213 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 SNX4O95219 450 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 CD1AP06126 327 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 TFPIP10646 304 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 GDI2P50395 445 aaKnown RBP16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 SSR4P51571 173 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 RPS18P62269 152 aaKnown RBP16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 PUDPQ08623 228 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 ZNF684Q5T5D7 378 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 DDI2Q5TDH0 399 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 PRAMEF20Q5VT98 475 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 CDCP2Q5VXM1 449 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 TMEM81Q6P7N7 255 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 H1FNTQ75WM6 255 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 CEACAM19Q7Z692 300 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 CDC20BQ86Y33 519 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 FADS6Q8N9I5 356 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 WDSUB1Q8N9V3 476 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 FAM83FQ8NEG4 500 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 PRSS33Q8NF86 280 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 OR4K17Q8NGC6 315 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 CT55Q8WUE5 264 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 FRMD6Q96NE9 622 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 MIXL1Q9H2W2 232 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 SERINC1Q9NRX5 453 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 TBCCD1Q9NVR7 557 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 VSX1Q9NZR4 365 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 PCNX3Q9H6A9 2034 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 MS4A18H0YCH9 400 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 H3BML4 177 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 PFDN1O60925 122 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 NCR1O76036 304 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 SERPINA3P01011 423 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 RAB40ALP0C0E4 278 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 IMPDH2P12268 514 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 EDNRAP25101 427 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 MS4A18Q3C1V0 323 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 STEAP3Q658P3 488 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 PLEKHG7Q6ZR37 379 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 PPP1R32Q7Z5V6 425 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 PXKQ7Z7A4 578 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 RPS19BP1Q86WX3 136 aaKnown RBP16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 ADAD1Q96M93 576 aaKnown RBP16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 MNTQ99583 582 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 COL25A1Q9BXS0 654 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 RNF32Q9H0A6 362 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 PPIL3Q9H2H8 161 aaKnown RBP16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 PTGES2Q9H7Z7 377 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 MARCH7Q9H992 704 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 FAM86C1Q9NVL1 165 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 V9GYH0 126 aa16.63■□□□□ 0.25
TRAPPC9-210ENST00000521667 TRBV2A0A0J9YWF9 115 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 LIPT2A6NK58 231 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 PRR32B1ATL7 298 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 TGM1P22735 817 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 CFL1P23528 166 aaKnown RBP16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 SHC1P29353 583 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 OTX2P32243 289 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 NUBP1P53384 320 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 ACSM3Q53FZ2 586 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 KCTD20Q7Z5Y7 419 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 DND1Q8IYX4 353 aaKnown RBP16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 KDM8Q8N371 416 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 OR6N2Q8NGY6 317 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 KLHL15Q96M94 604 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 INTS14Q96SY0 518 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 ATF6BQ99941 703 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 CCDC32Q9BV29 185 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 PARD6AQ9NPB6 346 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 CHST11Q9NPF2 352 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 TMEM9BQ9NQ34 198 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 ALKBH4Q9NXW9 302 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 B9D1Q9UPM9 204 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 TRAPPC4Q9Y296 219 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 KLHDC2Q9Y2U9 406 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 AKR7A3O95154 331 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 HLA-DOBP13765 273 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 MYL9P24844 172 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 PSMB10P40306 273 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 PSMD7P51665 324 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 MLF1P58340 268 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 MELKQ14680 651 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 GLYR1Q49A26 553 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 C3orf33Q6P1S2 294 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 EGFL6Q8IUX8 553 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 ARMC10Q8N2F6 343 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 SDHCQ99643 169 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 CDC6Q99741 560 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 SPRY4Q9C004 299 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 WDR76Q9H967 626 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 LAMP5Q9UJQ1 280 aa16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 FARSAQ9Y285 508 aaKnown RBP16.62■□□□□ 0.25
TRAPPC9-210ENST00000521667 KIF26BQ2KJY2 2108 aa16.61■□□□□ 0.25
TRAPPC9-210ENST00000521667 SLC22A23A1A5C7 686 aa16.61■□□□□ 0.25
TRAPPC9-210ENST00000521667 C9orf172C9J069 976 aa16.61■□□□□ 0.25
TRAPPC9-210ENST00000521667 PSMD9O00233 223 aa16.61■□□□□ 0.25
TRAPPC9-210ENST00000521667 TACSTD2P09758 323 aa16.61■□□□□ 0.25
TRAPPC9-210ENST00000521667 TLE3Q04726 772 aa16.61■□□□□ 0.25
TRAPPC9-210ENST00000521667 FAM27D1Q5T7N8 215 aa16.61■□□□□ 0.25
TRAPPC9-210ENST00000521667 PAMR1Q6UXH9 720 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms