RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 KCNE5Q9UJ90 142 aa11.73□□□□□ -0.53
TRAPPC9-208ENST00000520857 MOKQ9UQ07 419 aa11.73□□□□□ -0.53
TRAPPC9-208ENST00000520857 COLEC10Q9Y6Z7 277 aa11.73□□□□□ -0.53
TRAPPC9-208ENST00000520857 DCDC2BA2VCK2 349 aa11.73□□□□□ -0.53
TRAPPC9-208ENST00000520857 OR5H14A6NHG9 310 aa11.73□□□□□ -0.53
TRAPPC9-208ENST00000520857 CDC40O60508 579 aaKnown RBP eCLIP11.73□□□□□ -0.53
TRAPPC9-208ENST00000520857 GLSO94925 669 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC9-208ENST00000520857 S100A6P06703 90 aa11.73□□□□□ -0.53
TRAPPC9-208ENST00000520857 APEHP13798 732 aaKnown RBP11.73□□□□□ -0.53
TRAPPC9-208ENST00000520857 ZNF28P17035 718 aa11.73□□□□□ -0.53
TRAPPC9-208ENST00000520857 PPP2CBP62714 309 aa11.73□□□□□ -0.53
TRAPPC9-208ENST00000520857 PPP2CAP67775 309 aa11.73□□□□□ -0.53
TRAPPC9-208ENST00000520857 FGL1Q08830 312 aa11.73□□□□□ -0.53
TRAPPC9-208ENST00000520857 TMEM205Q6UW68 189 aa11.73□□□□□ -0.53
TRAPPC9-208ENST00000520857 PLPP7Q8NBV4 271 aa11.73□□□□□ -0.53
TRAPPC9-208ENST00000520857 OR10AC1Q8NH08 325 aa11.73□□□□□ -0.53
TRAPPC9-208ENST00000520857 ATOH1Q92858 354 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC9-208ENST00000520857 DMRTA2Q96SC8 542 aa11.73□□□□□ -0.53
TRAPPC9-208ENST00000520857 TMPRSS13Q9BYE2 586 aa11.73□□□□□ -0.53
TRAPPC9-208ENST00000520857 ZNF350Q9GZX5 532 aa11.73□□□□□ -0.53
TRAPPC9-208ENST00000520857 FANCFQ9NPI8 374 aa11.73□□□□□ -0.53
TRAPPC9-208ENST00000520857 STARD5Q9NSY2 213 aa11.73□□□□□ -0.53
TRAPPC9-208ENST00000520857 ERVK-19Q9WJR5 959 aa11.73□□□□□ -0.53
TRAPPC9-208ENST00000520857 ARPC4-TTLL3A0A0A6YYG9 625 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 NUDT14O95848 222 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 CALCBP10092 127 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 EMDP50402 254 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 ARFIP1P53367 373 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 ALKBH1Q13686 389 aaKnown RBP11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 SDR16C5Q8N3Y7 309 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 MFSD9Q8NBP5 474 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 GPR148Q8TDV2 347 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 ZNRF4Q8WWF5 429 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 SLC25A32Q9H2D1 315 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 FLRT3Q9NZU0 649 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 TCF20Q9UGU0 1960 aaKnown RBP11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 TBC1D3DA0A087WVF3 549 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 TBC1D3IA0A087WXS9 549 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 C4orf47A7E2U8 309 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 TBC1D3LB9A6J9 549 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 CTNSO60931 367 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 TBC1D3HP0C7X1 549 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 PVRP15151 417 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 ACTR1BP42025 376 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 ACTR1AP61163 376 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 RUNX2Q13950 521 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 IRF4Q15306 451 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 RAB11BQ15907 218 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 ZIC1Q15915 447 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 PRRT3Q5FWE3 981 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 TBC1D3CQ6IPX1 549 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 SLC35D2Q76EJ3 337 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 TBC1D3Q8IZP1 549 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 SVBPQ8N300 66 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 TMIEQ8NEW7 156 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 OR52R1Q8NGF1 315 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 STK35Q8TDR2 534 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 KIAA0100Q14667 2235 aaKnown RBP11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 H7C417 338 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 DNASE2O00115 360 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 FGF17O60258 216 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 PRKNO60260 465 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 KCNJ13O60928 360 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 OR4E1P0C645 316 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 CNR1P21554 472 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 EFNB2P52799 333 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 ZNF77Q15935 545 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 CDNFQ49AH0 187 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 SHEQ5VZ18 495 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 LHX8Q68G74 356 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 ENPP7Q6UWV6 458 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 ADAMTSL4Q6UY14 1074 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 RHOUQ7L0Q8 258 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 ARMC10Q8N2F6 343 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 OR14A16Q8NHC5 309 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 RBM18Q96H35 190 aaKnown RBP11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 PLEKHA1Q9HB21 404 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 MTFP1Q9UDX5 166 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 PCDHB10Q9UN67 800 aa11.72□□□□□ -0.53
TRAPPC9-208ENST00000520857 TRAV8-7A0A075B6U6 113 aa11.71□□□□□ -0.53
TRAPPC9-208ENST00000520857 A0A0D9SG52 128 aa11.71□□□□□ -0.53
TRAPPC9-208ENST00000520857 GGT3PA6NGU5 568 aa11.71□□□□□ -0.53
TRAPPC9-208ENST00000520857 C11orf98E9PRG8 122 aa11.71□□□□□ -0.53
TRAPPC9-208ENST00000520857 AKR1C4P17516 323 aa11.71□□□□□ -0.53
TRAPPC9-208ENST00000520857 CEBPBP17676 345 aa11.71□□□□□ -0.53
TRAPPC9-208ENST00000520857 OR7A5Q15622 319 aa11.71□□□□□ -0.53
TRAPPC9-208ENST00000520857 ITPRIPL2Q3MIP1 535 aa11.71□□□□□ -0.53
TRAPPC9-208ENST00000520857 KLHL26Q53HC5 615 aa11.71□□□□□ -0.53
TRAPPC9-208ENST00000520857 STPG1Q5TH74 334 aa11.71□□□□□ -0.53
TRAPPC9-208ENST00000520857 KIRREL2Q6UWL6 708 aa11.71□□□□□ -0.53
TRAPPC9-208ENST00000520857 OR4N2Q8NGD1 307 aa11.71□□□□□ -0.53
TRAPPC9-208ENST00000520857 OR5T2Q8NGG2 359 aa11.71□□□□□ -0.53
TRAPPC9-208ENST00000520857 ZNF417Q8TAU3 575 aa11.71□□□□□ -0.53
TRAPPC9-208ENST00000520857 PHYHIPQ92561 330 aa11.71□□□□□ -0.53
TRAPPC9-208ENST00000520857 ZBTB8AQ96BR9 441 aa11.71□□□□□ -0.53
TRAPPC9-208ENST00000520857 SCPEP1Q9HB40 452 aa11.71□□□□□ -0.53
TRAPPC9-208ENST00000520857 HAO2Q9NYQ3 351 aa11.71□□□□□ -0.53
TRAPPC9-208ENST00000520857 CKLFQ9UBR5 152 aa11.71□□□□□ -0.53
TRAPPC9-208ENST00000520857 AGPAT2O15120 278 aa11.71□□□□□ -0.53
TRAPPC9-208ENST00000520857 SIGLEC6O43699 453 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms