RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 CCL21O00585 134 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 CDX4O14627 284 aaPredicted RBP3.05□□□□□ -1.92
SQLE-204ENST00000520493 GOSR2O14653 212 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 YKT6O15498 198 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 TGM6O95932 706 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 IGKV3-15P01624 115 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 IGHV2-5P01817 119 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 MBP02144 154 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 ANXA5P08758 320 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 UBCP0CG48 685 aaKnown RBP3.05□□□□□ -1.92
SQLE-204ENST00000520493 DNAH10OSP0CZ25 163 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 IGLL1P15814 213 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 PTNP21246 168 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 BCKDHBP21953 392 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 DCKP27707 260 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 ERVK-25P63136 954 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 TGIF1Q15583 401 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 PGGHGQ32M88 737 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 C15orf32Q32M92 178 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 NSUN5P1Q3KNT7 163 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 PAN3Q58A45 887 aaKnown RBP3.05□□□□□ -1.92
SQLE-204ENST00000520493 MLIPQ5VWP3 458 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 OR52W1Q6IF63 320 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 PPP1R27Q86WC6 154 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 PLA2G4DQ86XP0 818 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 SKA3Q8IX90 412 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 FAM58AQ8N1B3 248 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 FTMTQ8N4E7 242 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 JAGN1Q8N5M9 183 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 GATSQ8NAP1 163 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 OR5T3Q8NGG3 340 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 LKAAEAR1Q8TD35 194 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 CERS2Q96G23 380 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 MSANTD3Q96H12 275 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 ZBED3Q96IU2 234 aaPredicted RBP3.05□□□□□ -1.92
SQLE-204ENST00000520493 HSFY1Q96LI6 401 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 OR8B4Q96RC9 309 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 SORT1Q99523 831 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 SLC29A1Q99808 456 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 KLHDC3Q9BQ90 382 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 MRPL45Q9BRJ2 306 aaKnown RBP3.05□□□□□ -1.92
SQLE-204ENST00000520493 PAXXQ9BUH6 204 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 TMEM59Q9BXS4 323 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 SELENOIQ9C0D9 397 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 NEUROG2Q9H2A3 272 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 MYOZ2Q9NPC6 264 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 MIEF1Q9NQG6 463 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 UXTQ9UBK9 157 aaPredicted RBP3.05□□□□□ -1.92
SQLE-204ENST00000520493 ZMAT5Q9UDW3 170 aaKnown RBP3.05□□□□□ -1.92
SQLE-204ENST00000520493 STAP1Q9ULZ2 295 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 SAR1BQ9Y6B6 198 aa3.05□□□□□ -1.92
SQLE-204ENST00000520493 IGHV1OR21-1A0A087WYE8 117 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 GSTTP1A0A1W2PQM5 241 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 A0A1W2PRD5 423 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 M0R3G1 203 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 PSMD11O00231 422 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 BCKDKO14874 412 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 NPPAP01160 153 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 PRKACBP22694 351 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 CD82P27701 267 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 TNFSF9P41273 254 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 SSR4P51571 173 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 GPM6AP51674 278 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 BIDP55957 195 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 CXCL6P80162 114 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 MECOMQ03112 1051 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 NCF4Q15080 339 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 LRRC36Q1X8D7 754 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 TIMM50Q3ZCQ8 353 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 OR2B11Q5JQS5 317 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 UTF1Q5T230 341 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 TRIM40Q6P9F5 258 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 SPESP1Q6UW49 350 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 SCARA5Q6ZMJ2 495 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 ZNF836Q6ZNA1 936 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 IQCF2Q8IXL9 164 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 PIANPQ8IYJ0 282 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 LIX1Q8N485 282 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 TRIML2Q8N7C3 387 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 CCDC71LQ8N9Z2 235 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 TTC29Q8NA56 475 aaPredicted RBP3.04□□□□□ -1.92
SQLE-204ENST00000520493 OR1S2Q8NGQ3 325 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 LILRB4Q8NHJ6 448 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 NAT6Q93015 286 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 FGGYQ96C11 551 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 ASB9Q96DX5 294 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 PGLYRP4Q96LB8 373 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 C9orf72Q96LT7 481 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 MS4A4EQ96PG1 132 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 SIGLEC12Q96PQ1 595 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 RANBP9Q96S59 729 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 HIST1H4GQ99525 98 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 RNF126Q9BV68 326 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 RANBP3Q9H6Z4 567 aaPredicted RBP3.04□□□□□ -1.92
SQLE-204ENST00000520493 LY9Q9HBG7 655 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 FGF20Q9NP95 211 aaPredicted RBP3.04□□□□□ -1.92
SQLE-204ENST00000520493 AGPAT3Q9NRZ7 376 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 APOBEC3BQ9UH17 382 aaKnown RBP3.04□□□□□ -1.92
SQLE-204ENST00000520493 SLC17A4Q9Y2C5 497 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 FLVCR1Q9Y5Y0 555 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms