RNA–Protein interactions for RNA: ENST00000517857.1

TOP1MT-203, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 2

Gene TOP1MT, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-203ENST00000517857 GPR35Q9HC97 309 aa12.79□□□□□ -0.36
TOP1MT-203ENST00000517857 IL1RAPQ9NPH3 570 aa12.79□□□□□ -0.36
TOP1MT-203ENST00000517857 SLC17A5Q9NRA2 495 aa12.79□□□□□ -0.36
TOP1MT-203ENST00000517857 AURKCQ9UQB9 309 aa12.79□□□□□ -0.36
TOP1MT-203ENST00000517857 AMDHD2Q9Y303 409 aa12.79□□□□□ -0.36
TOP1MT-203ENST00000517857 ABCA4P78363 2273 aa12.79□□□□□ -0.36
TOP1MT-203ENST00000517857 DCHS2Q6V1P9 2916 aa12.79□□□□□ -0.36
TOP1MT-203ENST00000517857 ANKRD17O75179 2603 aaKnown RBP12.79□□□□□ -0.36
TOP1MT-203ENST00000517857 A0A096LPE4 126 aa12.78□□□□□ -0.36
TOP1MT-203ENST00000517857 A0A1W2PPZ6 126 aa12.78□□□□□ -0.36
TOP1MT-203ENST00000517857 SEC14L2O76054 403 aa12.78□□□□□ -0.36
TOP1MT-203ENST00000517857 WNT11O96014 354 aa12.78□□□□□ -0.36
TOP1MT-203ENST00000517857 CD3EP07766 207 aa12.78□□□□□ -0.36
TOP1MT-203ENST00000517857 SLC9A3P48764 834 aa12.78□□□□□ -0.36
TOP1MT-203ENST00000517857 RASSF2P50749 326 aa12.78□□□□□ -0.36
TOP1MT-203ENST00000517857 ZNF83P51522 516 aa12.78□□□□□ -0.36
TOP1MT-203ENST00000517857 CLRN1P58418 232 aa12.78□□□□□ -0.36
TOP1MT-203ENST00000517857 PRPS1P60891 318 aa12.78□□□□□ -0.36
TOP1MT-203ENST00000517857 ARF1P84077 181 aaKnown RBP12.78□□□□□ -0.36
TOP1MT-203ENST00000517857 CHRNB3Q05901 458 aa12.78□□□□□ -0.36
TOP1MT-203ENST00000517857 TBRG1Q3YBR2 411 aa12.78□□□□□ -0.36
TOP1MT-203ENST00000517857 PHYHD1Q5SRE7 291 aa12.78□□□□□ -0.36
TOP1MT-203ENST00000517857 ZNF704Q6ZNC4 412 aaPredicted RBP12.78□□□□□ -0.36
TOP1MT-203ENST00000517857 IGFN1Q86VF2 1251 aa12.78□□□□□ -0.36
TOP1MT-203ENST00000517857 OR4K5Q8NGD3 323 aa12.78□□□□□ -0.36
TOP1MT-203ENST00000517857 OR6X1Q8NH79 312 aa12.78□□□□□ -0.36
TOP1MT-203ENST00000517857 ZNF566Q969W8 418 aa12.78□□□□□ -0.36
TOP1MT-203ENST00000517857 DHRS1Q96LJ7 313 aa12.78□□□□□ -0.36
TOP1MT-203ENST00000517857 MAGIXQ9H6Y5 334 aa12.78□□□□□ -0.36
TOP1MT-203ENST00000517857 TMCC3Q9ULS5 477 aa12.78□□□□□ -0.36
TOP1MT-203ENST00000517857 EDARQ9UNE0 448 aa12.78□□□□□ -0.36
TOP1MT-203ENST00000517857 POFUT2Q9Y2G5 429 aa12.78□□□□□ -0.36
TOP1MT-203ENST00000517857 HIF3AQ9Y2N7 669 aa12.78□□□□□ -0.36
TOP1MT-203ENST00000517857 RNF115Q9Y4L5 304 aa12.78□□□□□ -0.36
TOP1MT-203ENST00000517857 MAGED1Q9Y5V3 778 aaPredicted RBP12.78□□□□□ -0.36
TOP1MT-203ENST00000517857 SLC25A15Q9Y619 301 aa12.78□□□□□ -0.36
TOP1MT-203ENST00000517857 A0A1W2PPR1 153 aa12.77□□□□□ -0.37
TOP1MT-203ENST00000517857 RPL36A-HNRNPH2H7BZ11 118 aa12.77□□□□□ -0.37
TOP1MT-203ENST00000517857 M0R1B8 84 aa12.77□□□□□ -0.37
TOP1MT-203ENST00000517857 ATP5HO75947 161 aa12.77□□□□□ -0.37
TOP1MT-203ENST00000517857 IGHG1P01857 330 aa12.77□□□□□ -0.37
TOP1MT-203ENST00000517857 LOXP28300 417 aaPredicted RBP12.77□□□□□ -0.37
TOP1MT-203ENST00000517857 RPL4P36578 427 aaKnown RBP12.77□□□□□ -0.37
TOP1MT-203ENST00000517857 CAPZA2P47755 286 aa12.77□□□□□ -0.37
TOP1MT-203ENST00000517857 BSPH1Q075Z2 132 aa12.77□□□□□ -0.37
TOP1MT-203ENST00000517857 TRAP1Q12931 704 aaKnown RBP12.77□□□□□ -0.37
TOP1MT-203ENST00000517857 FLOT2Q14254 428 aa12.77□□□□□ -0.37
TOP1MT-203ENST00000517857 LAPTM4AQ15012 233 aa12.77□□□□□ -0.37
TOP1MT-203ENST00000517857 SEC23BQ15437 767 aa12.77□□□□□ -0.37
TOP1MT-203ENST00000517857 TAF11Q15544 211 aa12.77□□□□□ -0.37
TOP1MT-203ENST00000517857 ACKR1Q16570 336 aa12.77□□□□□ -0.37
TOP1MT-203ENST00000517857 IQCCQ4KMZ1 466 aa12.77□□□□□ -0.37
TOP1MT-203ENST00000517857 ANKRD16Q6P6B7 361 aa12.77□□□□□ -0.37
TOP1MT-203ENST00000517857 KLHL17Q6TDP4 642 aa12.77□□□□□ -0.37
TOP1MT-203ENST00000517857 PAMR1Q6UXH9 720 aa12.77□□□□□ -0.37
TOP1MT-203ENST00000517857 WDFY1Q8IWB7 410 aa12.77□□□□□ -0.37
TOP1MT-203ENST00000517857 WDR31Q8NA23 367 aa12.77□□□□□ -0.37
TOP1MT-203ENST00000517857 NOXO1Q8NFA2 376 aa12.77□□□□□ -0.37
TOP1MT-203ENST00000517857 ASB10Q8WXI3 467 aa12.77□□□□□ -0.37
TOP1MT-203ENST00000517857 POP5Q969H6 163 aaKnown RBP12.77□□□□□ -0.37
TOP1MT-203ENST00000517857 SLC25A44Q96H78 314 aaPredicted RBP12.77□□□□□ -0.37
TOP1MT-203ENST00000517857 LRR1Q96L50 414 aa12.77□□□□□ -0.37
TOP1MT-203ENST00000517857 ALPK1Q96QP1 1244 aa12.77□□□□□ -0.37
TOP1MT-203ENST00000517857 C1QTNF6Q9BXI9 259 aa12.77□□□□□ -0.37
TOP1MT-203ENST00000517857 LIME1Q9H400 295 aa12.77□□□□□ -0.37
TOP1MT-203ENST00000517857 NPAP1Q9NZP6 1156 aa12.77□□□□□ -0.37
TOP1MT-203ENST00000517857 ITGB1BP2Q9UKP3 347 aa12.77□□□□□ -0.37
TOP1MT-203ENST00000517857 PLEKHA6Q9Y2H5 1048 aa12.77□□□□□ -0.37
TOP1MT-203ENST00000517857 SH3PXD2BA1X283 911 aa12.76□□□□□ -0.37
TOP1MT-203ENST00000517857 ZNF99A8MXY4 864 aaPredicted RBP12.76□□□□□ -0.37
TOP1MT-203ENST00000517857 CDC42EP2O14613 210 aa12.76□□□□□ -0.37
TOP1MT-203ENST00000517857 OR10H3O60404 316 aa12.76□□□□□ -0.37
TOP1MT-203ENST00000517857 DNASE1P24855 282 aa12.76□□□□□ -0.37
TOP1MT-203ENST00000517857 CTXN1P60606 82 aa12.76□□□□□ -0.37
TOP1MT-203ENST00000517857 RPS4XP62701 263 aaKnown RBP12.76□□□□□ -0.37
TOP1MT-203ENST00000517857 TUBA1BP68363 451 aa12.76□□□□□ -0.37
TOP1MT-203ENST00000517857 TUBA4AP68366 448 aa12.76□□□□□ -0.37
TOP1MT-203ENST00000517857 KEAP1Q14145 624 aa12.76□□□□□ -0.37
TOP1MT-203ENST00000517857 ANKDD1AQ495B1 522 aa12.76□□□□□ -0.37
TOP1MT-203ENST00000517857 NCMAPQ5T1S8 102 aa12.76□□□□□ -0.37
TOP1MT-203ENST00000517857 ADAM5Q6NVV9 412 aa12.76□□□□□ -0.37
TOP1MT-203ENST00000517857 SEZ6L2Q6UXD5 910 aa12.76□□□□□ -0.37
TOP1MT-203ENST00000517857 TMEM108Q6UXF1 575 aa12.76□□□□□ -0.37
TOP1MT-203ENST00000517857 NHLRC1Q6VVB1 395 aa12.76□□□□□ -0.37
TOP1MT-203ENST00000517857 TMPRSS11FQ6ZWK6 438 aa12.76□□□□□ -0.37
TOP1MT-203ENST00000517857 TUBA1AQ71U36 451 aa12.76□□□□□ -0.37
TOP1MT-203ENST00000517857 PIWIL3Q7Z3Z3 882 aaKnown RBP12.76□□□□□ -0.37
TOP1MT-203ENST00000517857 SPATA24Q86W54 205 aa12.76□□□□□ -0.37
TOP1MT-203ENST00000517857 ZNF837Q96EG3 531 aaPredicted RBP12.76□□□□□ -0.37
TOP1MT-203ENST00000517857 RSRC1Q96IZ7 334 aaKnown RBP12.76□□□□□ -0.37
TOP1MT-203ENST00000517857 TNFRSF13CQ96RJ3 184 aa12.76□□□□□ -0.37
TOP1MT-203ENST00000517857 PLEKHF2Q9H8W4 249 aa12.76□□□□□ -0.37
TOP1MT-203ENST00000517857 GLTPQ9NZD2 209 aa12.76□□□□□ -0.37
TOP1MT-203ENST00000517857 STX18Q9P2W9 335 aaKnown RBP12.76□□□□□ -0.37
TOP1MT-203ENST00000517857 ST6GALNAC2Q9UJ37 374 aa12.76□□□□□ -0.37
TOP1MT-203ENST00000517857 MAST4O15021 2626 aa12.76□□□□□ -0.37
TOP1MT-203ENST00000517857 AKAP6Q13023 2319 aa12.76□□□□□ -0.37
TOP1MT-203ENST00000517857 POLQO75417 2590 aa12.76□□□□□ -0.37
TOP1MT-203ENST00000517857 HRNRQ86YZ3 2850 aaPredicted RBP12.75□□□□□ -0.37
TOP1MT-203ENST00000517857 AQP12BA6NM10 295 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms