RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 LOC107984156A0A0G2JMH3 177 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 FAM237BA0A1B0GVD1 139 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 ATP6AP2A0A1C7CYW4 349 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 ARHGAP42A6NI28 874 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 A6NIZ1 184 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 VSTM2BA6NLU5 285 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 C17orf98A8MV24 154 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 CDRT15L2A8MXV6 281 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 ZNF879B4DU55 563 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 RNF113AO15541 343 aaKnown RBP-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 AP5Z1O43299 807 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 LGI1O95970 557 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 MT-CO2P00403 227 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 IGHV1-46P01743 117 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 UROSP10746 265 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 ZNF22P17026 224 aaPredicted RBP-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 ATF1P18846 271 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 ATP6V1B2P21281 511 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 BSGP35613 385 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 COILP38432 576 aaPredicted RBP-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 AQP2P41181 271 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 TSPAN7P41732 249 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 NCBP2P52298 156 aaKnown RBP eCLIP-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 MTCP1P56278 107 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 RAP1BP61224 184 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 HSPA14Q0VDF9 509 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 SCRN3Q0VDG4 424 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 BNIP1Q12981 228 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 DHRS2Q13268 280 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 BTN1A1Q13410 526 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 LAGE3Q14657 143 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 PSMD6Q15008 389 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 RAB35Q15286 201 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 CYTH1Q15438 398 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 ZRSR2Q15696 482 aaKnown RBP-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 ATP6AP1Q15904 470 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 SNRNP35Q16560 246 aaKnown RBP-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 BAK1Q16611 211 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 POU2AF1Q16633 256 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 NDUFAF6Q330K2 333 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 TWISTNBQ3B726 338 aaPredicted RBP-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 PYCR3Q53H96 274 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 SPIN4Q56A73 249 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 GKAP1Q5VSY0 366 aaPredicted RBP-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 PVRIGQ6DKI7 326 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 GLYATQ6IB77 296 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 SARM1Q6SZW1 724 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 CBLN3Q6UW01 205 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 NLRP9Q7RTR0 991 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 IFNEQ86WN2 208 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 ARL17AQ8IVW1 177 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 CPNE9Q8IYJ1 553 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 TCEAL8Q8IYN2 117 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 LINC00518Q8N0U6 118 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 ATOH7Q8N100 152 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 CHST4Q8NCG5 386 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 OR5C1Q8NGR4 320 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 DCPSQ96C86 337 aaKnown RBP-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 PRRC1Q96M27 445 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 GPR82Q96P67 336 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 PRMT1Q99873 361 aaKnown RBP-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 Q9BRP9 147 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 NTMT1Q9BV86 223 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 UTP14AQ9BVJ6 771 aaKnown RBP-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 KRT23Q9C075 422 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 FGF23Q9GZV9 251 aaPredicted RBP-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 SLC38A10Q9HBR0 1119 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 PROK2Q9HC23 129 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 PIPOXQ9P0Z9 390 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 CDH7Q9ULB5 785 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 PSG8Q9UQ74 426 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 ERVK-19Q9WJR5 959 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 RUVBL2Q9Y230 463 aaKnown RBP-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 TRPV2Q9Y5S1 764 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 SESN1Q9Y6P5 492 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 V9GY05 133 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 LAMA3Q16787 3333 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 CSPG4Q6UVK1 2322 aa-1.39□□□□□ -2.63
RNU6-1238P-201ENST00000517215 GRIN2DO15399 1336 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 USP42Q9H9J4 1324 aaKnown RBP-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 CITO14578 2027 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 PHF3Q92576 2039 aaKnown RBP-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 NUMA1Q14980 2115 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 MED13LQ71F56 2210 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 IGHV3-64A0A075B6Q5 118 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 IGHV1OR21-1A0A087WYE8 117 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 A0A1B0GVG6 124 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 LINC00854A0A1B0GVQ3 168 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 A0A1W2PRG6 482 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 C12orf71A8MTZ7 269 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 VSTM5A8MXK1 200 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 F5H5T6 163 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 TRIM77I1YAP6 450 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 CLDN4O14493 209 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 FFAR1O14842 300 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 SYNGR1O43759 233 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 LY6HO94772 140 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 KCNK2O95069 426 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 LRATO95237 230 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 IGHV3-11P01762 117 aa-1.4□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms