RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 CREBRFQ8IUR6 639 aa-1.97□□□□□ -2.72
RNU6-542P-201ENST00000516405 MUC15Q8N387 334 aa-1.97□□□□□ -2.72
RNU6-542P-201ENST00000516405 MRPL43Q8N983 215 aaKnown RBP-1.97□□□□□ -2.72
RNU6-542P-201ENST00000516405 VPS37AQ8NEZ2 397 aa-1.97□□□□□ -2.72
RNU6-542P-201ENST00000516405 OR1N2Q8NGR9 330 aa-1.97□□□□□ -2.72
RNU6-542P-201ENST00000516405 ZNF420Q8TAQ5 688 aaPredicted RBP-1.97□□□□□ -2.72
RNU6-542P-201ENST00000516405 MR1Q95460 341 aa-1.97□□□□□ -2.72
RNU6-542P-201ENST00000516405 RAD51AP1Q96B01 352 aa-1.97□□□□□ -2.72
RNU6-542P-201ENST00000516405 TIGD1Q96MW7 591 aa-1.97□□□□□ -2.72
RNU6-542P-201ENST00000516405 ACCSQ96QU6 501 aa-1.97□□□□□ -2.72
RNU6-542P-201ENST00000516405 ALDH8A1Q9H2A2 487 aaPredicted RBP-1.97□□□□□ -2.72
RNU6-542P-201ENST00000516405 SAV1Q9H4B6 383 aaPredicted RBP-1.97□□□□□ -2.72
RNU6-542P-201ENST00000516405 CSNK1G1Q9HCP0 422 aa-1.97□□□□□ -2.72
RNU6-542P-201ENST00000516405 FAM114A2Q9NRY5 505 aa-1.97□□□□□ -2.72
RNU6-542P-201ENST00000516405 CYP39A1Q9NYL5 469 aa-1.97□□□□□ -2.72
RNU6-542P-201ENST00000516405 DOPEY2Q9Y3R5 2298 aa-1.97□□□□□ -2.73
RNU6-542P-201ENST00000516405 PLEKHG2Q9H7P9 1386 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 BAZ1BQ9UIG0 1483 aaKnown RBP-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 IGKV1-27A0A075B6S5 117 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 IGHV1OR21-1A0A087WYE8 117 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 IGHV7-4-1A0A0J9YVY3 117 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 TRBV6-5A0A0K0K1A5 114 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 A0A1B0GU33 70 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 ZNF726A6NNF4 738 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 KMOO15229 486 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 SLC31A1O15431 190 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 SLC7A4O43246 635 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 ZNF208O43345 1280 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 SH3BP5O60239 455 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 JAK2O60674 1132 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 TRIM3O75382 744 aaPredicted RBP-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 CRTAPO75718 401 aaPredicted RBP-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 S100BP04271 92 aaPredicted RBP-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 PRPS1L1P21108 318 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 CASP14P31944 242 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 HTR3AP46098 478 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 MAB21L1Q13394 359 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 CUL2Q13617 745 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 ARL6IP1Q15041 203 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 OXA1LQ15070 435 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 PON2Q15165 354 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 STXBP2Q15833 593 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 SPINK9Q5DT21 86 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 TIGD3Q6B0B8 471 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 RTL6Q6ICC9 239 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 CLEC18BQ6UXF7 455 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 H2AFVQ71UI9 128 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 NLRP9Q7RTR0 991 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 ZNF571Q7Z3V5 609 aaPredicted RBP-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 LHFPL3Q86UP9 236 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 ANKRD46Q86W74 232 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 MED12LQ86YW9 2145 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 LINC00346Q8IVM7 164 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 ZCCHC7Q8N3Z6 543 aaKnown RBP-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 Q8NAQ8 132 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 OR5T1Q8NG75 326 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 OR8K1Q8NGG5 319 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 OR6M1Q8NGM8 313 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 OR56B4Q8NH76 319 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 OR2V1Q8NHB1 315 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 MRPL53Q96EL3 112 aaKnown RBP-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 CCDC114Q96M63 670 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 CITED1Q99966 193 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 KATNB1Q9BVA0 655 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 XPO7Q9UIA9 1087 aaKnown RBP-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 CDH7Q9ULB5 785 aa-1.98□□□□□ -2.73
RNU6-542P-201ENST00000516405 PEAK1Q9H792 1746 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 IGHV3-49A0A0A0MS15 119 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 HSFX4A0A1B0GTS1 333 aaPredicted RBP-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 HSFX3A0A1B0GWH4 333 aaPredicted RBP-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 A6NLC8 198 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 OR7C2O60412 319 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 CSF3P09919 207 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 GKN3PP0CG01 181 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 UROSP10746 265 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 B4GALT1P15291 398 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 IMPDH1P20839 514 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 SERPINA2P20848 420 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 DTYMKP23919 212 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 AQP2P41181 271 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 SGSHP51688 502 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 HCCSP53701 268 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 ANAPC15P60006 121 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 ELF3P78545 371 aaPredicted RBP-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 CRADDP78560 199 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 TFCP2Q12800 502 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 NPRL3Q12980 569 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 MRPL28Q13084 256 aaKnown RBP-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 CYTH1Q15438 398 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 RGNQ15493 299 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 UBE2V2Q15819 145 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 PDCD2Q16342 344 aaPredicted RBP-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 LRIT3Q3SXY7 679 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 ZBED5Q49AG3 693 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 CYBRD1Q53TN4 286 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 CDC42EP5Q6NZY7 148 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 DEGS2Q6QHC5 323 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 ZNF493Q6ZR52 646 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 SVOPLQ8N434 492 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 ZIC4Q8N9L1 334 aa-1.99□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms