RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 IGF2P01344 180 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 POU2F1P14859 743 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 HTR2AP28223 471 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 PCSK6P29122 969 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 RBM34P42696 430 aaKnown RBP7.42□□□□□ -1.22
CCL28-204ENST00000514421 KIR2DL2P43627 348 aaPredicted RBP7.42□□□□□ -1.22
CCL28-204ENST00000514421 CTBP2P56545 445 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 CSNK2A1P68400 391 aaPredicted RBP7.42□□□□□ -1.22
CCL28-204ENST00000514421 HOXC5Q00444 222 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 TFF3Q07654 80 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 RNPS1Q15287 305 aaKnown RBP7.42□□□□□ -1.22
CCL28-204ENST00000514421 OR1Q1Q15612 314 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 NEDD8Q15843 81 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 FBXL19-AS1Q494R0 122 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 MEDAGQ5VYS4 303 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 LINC00114Q6XXX2 140 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 SLC16A12Q6ZSM3 486 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 FCRLAQ7L513 359 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 FAM214BQ7L5A3 538 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 KIF18BQ86Y91 864 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 CLVS1Q8IUQ0 354 aaPredicted RBP7.42□□□□□ -1.22
CCL28-204ENST00000514421 P3H2Q8IVL5 708 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 MCEMP1Q8IX19 187 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 GCNT2Q8N0V5 402 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 SLC43A2Q8N370 569 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 ZNF540Q8NDQ6 660 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 PIGXQ8TBF5 258 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 DNAJA4Q8WW22 397 aaPredicted RBP7.42□□□□□ -1.22
CCL28-204ENST00000514421 GGHQ92820 318 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 C12orf43Q96C57 262 aaKnown RBP7.42□□□□□ -1.22
CCL28-204ENST00000514421 DDIT4LQ96D03 193 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 NMD3Q96D46 503 aaKnown RBP7.42□□□□□ -1.22
CCL28-204ENST00000514421 STARD4Q96DR4 205 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 YIPF6Q96EC8 236 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 GMPPAQ96IJ6 420 aaPredicted RBP7.42□□□□□ -1.22
CCL28-204ENST00000514421 Q96MT0 163 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 COG8Q96MW5 612 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 COPS4Q9BT78 406 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 SRXN1Q9BYN0 137 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 ENKD1Q9H0I2 346 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 C12orf10Q9HB07 376 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 GP6Q9HCN6 339 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 RASSF1Q9NS23 344 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 CLN6Q9NWW5 311 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 IMPAD1Q9NX62 359 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 JKAMPQ9P055 326 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 FOXD3Q9UJU5 478 aaPredicted RBP7.42□□□□□ -1.22
CCL28-204ENST00000514421 A0A0B4J2E0 115 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 A0A1B0GWA3 101 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 A0A1B0GX12 115 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 CPSF4LA6NMK7 179 aaKnown RBP7.41□□□□□ -1.22
CCL28-204ENST00000514421 A8MXE2 369 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 C19orf84I3L1E1 186 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 MSTNO14793 375 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 DNPH1O43598 174 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 EIF1BO60739 113 aaKnown RBP7.41□□□□□ -1.22
CCL28-204ENST00000514421 TNFSF13O75888 250 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 GABARAPO95166 117 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 PMS2P2O95744 297 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 PLGP00747 810 aaPredicted RBP7.41□□□□□ -1.22
CCL28-204ENST00000514421 MT-ND2P03891 347 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 YES1P07947 543 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 CD8BP10966 210 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 PNMTP11086 282 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 COX6B1P14854 86 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 PEX19P40855 299 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 PCYT1AP49585 367 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 DIO1P49895 249 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 ASCL1P50553 236 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 OR2B6P58173 313 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 SLC35A1P78382 337 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 ROR2Q01974 943 aaKnown RBP7.41□□□□□ -1.22
CCL28-204ENST00000514421 PRKCDQ05655 676 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 MYBPHQ13203 477 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 GUSBP1Q15486 140 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 ZNF239Q16600 458 aaKnown RBP7.41□□□□□ -1.22
CCL28-204ENST00000514421 GPR107Q5VW38 600 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 TMEM236Q5W0B7 351 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 HIST2H2BCQ6DN03 193 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 ULK3Q6PHR2 472 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 ZNF730Q6ZMV8 503 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 LINC00299Q6ZSB3 139 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 PTCHD4Q6ZW05 846 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 TMPRSS11FQ6ZWK6 438 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 BTLAQ7Z6A9 289 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 ATG4DQ86TL0 474 aaPredicted RBP7.41□□□□□ -1.22
CCL28-204ENST00000514421 NKAIN4Q8IVV8 208 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 CNEP1R1Q8N9A8 125 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 ACBD4Q8NC06 268 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 RELL2Q8NC24 303 aaPredicted RBP7.41□□□□□ -1.22
CCL28-204ENST00000514421 STK35Q8TDR2 534 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 RORBQ92753 470 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 RNASE6Q93091 150 aaKnown RBP7.41□□□□□ -1.22
CCL28-204ENST00000514421 C3orf49Q96BT1 292 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 ZHX1-C8orf76Q96EF9 292 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 MPP4Q96JB8 637 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 ARL5BQ96KC2 179 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 HS6ST2Q96MM7 605 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 RHNO1Q9BSD3 238 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 NAA11Q9BSU3 229 aaPredicted RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms