RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 SLC35F4A4IF30 521 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 C2orf72A6NCS6 295 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 XKRYO14609 159 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 GMFGO60234 142 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 CBR3O75828 277 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 SC5DO75845 299 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 SULT1C4O75897 302 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 GYPBP06028 91 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 CCL3P10147 92 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 LIFP15018 202 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 CELP19835 753 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 CFL1P23528 166 aaKnown RBP7.53□□□□□ -1.2
RNF4-220ENST00000513578 CRABP1P29762 137 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 OTX2P32243 289 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 ACVR1BP36896 505 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 DLSTP36957 453 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 RPS19P39019 145 aaKnown RBP7.53□□□□□ -1.2
RNF4-220ENST00000513578 NBL1P41271 181 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 TGM4P49221 684 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 DAP3P51398 398 aaKnown RBP7.53□□□□□ -1.2
RNF4-220ENST00000513578 GBX2P52951 348 aaPredicted RBP7.53□□□□□ -1.2
RNF4-220ENST00000513578 FABP5Q01469 135 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 ZNF45Q02386 682 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 PUDPQ08623 228 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 TCF15Q12870 199 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 CRTC2Q53ET0 693 aaPredicted RBP7.53□□□□□ -1.2
RNF4-220ENST00000513578 STPG1Q5TH74 334 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 TIGD3Q6B0B8 471 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 RPL22L1Q6P5R6 122 aaKnown RBP7.53□□□□□ -1.2
RNF4-220ENST00000513578 POMZP3Q6PJE2 187 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 PLEKHG7Q6ZR37 379 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 TRILQ7L0X0 811 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 TMPRSS12Q86WS5 348 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 LSRQ86X29 649 aaPredicted RBP7.53□□□□□ -1.2
RNF4-220ENST00000513578 CDC20BQ86Y33 519 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 TIGD4Q8IY51 512 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 OR6V1Q8N148 313 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 TMEM156Q8N614 296 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 ASB10Q8WXI3 467 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 THAP4Q8WY91 577 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 PSMF1Q92530 271 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 PHYHIPQ92561 330 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 SLC25A46Q96AG3 418 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 NXPE2Q96DL1 559 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 ARL5BQ96KC2 179 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 WDFY2Q96P53 400 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 NPAS1Q99742 590 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 MFRPQ9BY79 579 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 OR11A1Q9GZK7 315 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 TSPAN10Q9H1Z9 355 aaPredicted RBP7.53□□□□□ -1.2
RNF4-220ENST00000513578 KCNN2Q9H2S1 579 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 RNF167Q9H6Y7 350 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 EXOSC4Q9NPD3 245 aaKnown RBP7.53□□□□□ -1.2
RNF4-220ENST00000513578 RPRD1BQ9NQG5 326 aaKnown RBP7.53□□□□□ -1.2
RNF4-220ENST00000513578 KLHL13Q9P2N7 655 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 NCDNQ9UBB6 729 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 ST6GALNAC2Q9UJ37 374 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 FBXL2Q9UKC9 423 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 B9D1Q9UPM9 204 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 VDAC3Q9Y277 283 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 RPH3AQ9Y2J0 694 aaPredicted RBP7.53□□□□□ -1.2
RNF4-220ENST00000513578 TMEM14AQ9Y6G1 99 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 OTOGLQ3ZCN5 2332 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 NCOR2Q9Y618 2525 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 CACNA1HO95180 2353 aa7.53□□□□□ -1.2
RNF4-220ENST00000513578 IGLV1-36A0A0B4J1U3 117 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 PNMA8CA0A1B0GUJ8 204 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 SLC22A23A1A5C7 686 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 STMND1H3BQB6 276 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 GABRPO00591 440 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 ARHGEF9O43307 516 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 DNPH1O43598 174 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 GPRIN2O60269 458 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 RGS9O75916 674 aaPredicted RBP7.52□□□□□ -1.21
RNF4-220ENST00000513578 TNFSF15O95150 251 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 PMS2P2O95744 297 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 SERPINA3P01011 423 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 MRPL3P09001 348 aaKnown RBP7.52□□□□□ -1.21
RNF4-220ENST00000513578 TACSTD2P09758 323 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 BMP4P12644 408 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 CSRP1P21291 193 aaKnown RBP7.52□□□□□ -1.21
RNF4-220ENST00000513578 GTF2E2P29084 291 aaKnown RBP7.52□□□□□ -1.21
RNF4-220ENST00000513578 S100A5P33763 92 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 PTGS2P35354 604 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 MTNR1BP49286 362 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 P2RY4P51582 365 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 PPP5CP53041 499 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 OR12D2P58182 307 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 RPS18P62269 152 aaKnown RBP7.52□□□□□ -1.21
RNF4-220ENST00000513578 EGR3Q06889 387 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 OR7A5Q15622 319 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 CCDC157Q569K6 752 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 TEX30Q5JUR7 227 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 ACER2Q5QJU3 275 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 DNM1P34Q6PK57 102 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 PAMR1Q6UXH9 720 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 TMEM91Q6ZNR0 172 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 SSX6Q7RTT6 188 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 HDDC2Q7Z4H3 204 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 DTX1Q86Y01 620 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms