RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 hCG_38984A0A1B0GV85 526 aa5.4□□□□□ -1.55
CHD1-208ENST00000512392 E9PAM4 449 aa5.4□□□□□ -1.55
CHD1-208ENST00000512392 H3BNH8 94 aa5.4□□□□□ -1.55
CHD1-208ENST00000512392 WNT9BO14905 357 aa5.4□□□□□ -1.55
CHD1-208ENST00000512392 PI15O43692 258 aa5.4□□□□□ -1.55
CHD1-208ENST00000512392 SHOX2O60902 331 aaPredicted RBP5.4□□□□□ -1.55
CHD1-208ENST00000512392 TDP2O95551 362 aa5.4□□□□□ -1.55
CHD1-208ENST00000512392 IGSF6O95976 241 aa5.4□□□□□ -1.55
CHD1-208ENST00000512392 H1F0P07305 194 aaKnown RBP5.4□□□□□ -1.55
CHD1-208ENST00000512392 TIMP3P35625 211 aa5.4□□□□□ -1.55
CHD1-208ENST00000512392 CEACAM6P40199 344 aa5.4□□□□□ -1.55
CHD1-208ENST00000512392 XCR1P46094 333 aa5.4□□□□□ -1.55
CHD1-208ENST00000512392 OR10A3P58181 314 aa5.4□□□□□ -1.55
CHD1-208ENST00000512392 FAM3AP98173 230 aa5.4□□□□□ -1.55
CHD1-208ENST00000512392 TRAF3Q13114 568 aa5.4□□□□□ -1.55
CHD1-208ENST00000512392 SRSF6Q13247 344 aaKnown RBP5.4□□□□□ -1.55
CHD1-208ENST00000512392 RAB31Q13636 194 aa5.4□□□□□ -1.55
CHD1-208ENST00000512392 SF3A2Q15428 464 aaKnown RBP5.4□□□□□ -1.55
CHD1-208ENST00000512392 DGUOKQ16854 277 aa5.4□□□□□ -1.55
CHD1-208ENST00000512392 ZNF658BQ4V348 819 aaPredicted RBP5.4□□□□□ -1.55
CHD1-208ENST00000512392 HES5Q5TA89 166 aa5.4□□□□□ -1.55
CHD1-208ENST00000512392 ACOT7LQ6ZUV0 252 aa5.4□□□□□ -1.55
CHD1-208ENST00000512392 ZNF771Q7L3S4 317 aaPredicted RBP5.4□□□□□ -1.55
CHD1-208ENST00000512392 MYPOPQ86VE0 399 aaPredicted RBP5.4□□□□□ -1.55
CHD1-208ENST00000512392 IQCF1Q8N6M8 205 aa5.4□□□□□ -1.55
CHD1-208ENST00000512392 RNF138Q8WVD3 245 aa5.4□□□□□ -1.55
CHD1-208ENST00000512392 ZBED6CLQ96FA7 236 aaPredicted RBP5.4□□□□□ -1.55
CHD1-208ENST00000512392 IL17FQ96PD4 163 aa5.4□□□□□ -1.55
CHD1-208ENST00000512392 PCBD2Q9H0N5 130 aa5.4□□□□□ -1.55
CHD1-208ENST00000512392 KLHL31Q9H511 634 aa5.4□□□□□ -1.55
CHD1-208ENST00000512392 THUMPD1Q9NXG2 353 aaKnown RBP5.4□□□□□ -1.55
CHD1-208ENST00000512392 SNX24Q9Y343 169 aa5.4□□□□□ -1.55
CHD1-208ENST00000512392 MTCH2Q9Y6C9 303 aa5.4□□□□□ -1.55
CHD1-208ENST00000512392 EIF3AQ14152 1382 aaKnown RBP5.39□□□□□ -1.55
CHD1-208ENST00000512392 A0A0A6YYD5 115 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 GLYATL1P3A0A0U1RQE8 302 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 A0A1B0GW55 424 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 OR5K3A6NET4 321 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 C21orf140B9A014 251 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 PRRG2O14669 202 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 HSD17B6O14756 317 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 PRKNO60260 465 aaPredicted RBP5.39□□□□□ -1.55
CHD1-208ENST00000512392 MPZL2O60487 215 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 CNIH1O95406 144 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 AP2A1O95782 977 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 IGHG4P01861 327 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 CD5P06127 495 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 RHOCP08134 193 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 GSTA1P08263 222 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 HBQ1P09105 142 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 DUX4L2P0CJ85 424 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 DUX4L3P0CJ86 424 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 DUX4L4P0CJ87 422 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 DUX4L5P0CJ88 424 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 DUX4L6P0CJ89 424 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 DUX4L7P0CJ90 424 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 FASP25445 335 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 OPRD1P41143 372 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 LEPP41159 167 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 TNFSF9P41273 254 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 CYB561P49447 251 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 BACE1P56817 501 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 PRKCDQ05655 676 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 BSXQ3C1V8 233 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 BRMS1LQ5PSV4 323 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 RBM48Q5RL73 367 aaKnown RBP5.39□□□□□ -1.55
CHD1-208ENST00000512392 DUX4L9Q6RFH8 374 aaPredicted RBP5.39□□□□□ -1.55
CHD1-208ENST00000512392 Q6ZRM9 215 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 Q6ZSR9 355 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 RFPL4BQ6ZWI9 263 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 PEG10Q86TG7 708 aaKnown RBP5.39□□□□□ -1.55
CHD1-208ENST00000512392 STPG2Q8N412 459 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 ATP6V1C2Q8NEY4 427 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 PXT1Q8NFP0 134 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 OR5AK3PQ8NH89 298 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 THAP6Q8TBB0 222 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 MCOLN3Q8TDD5 553 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 DLX4Q92988 240 aaPredicted RBP5.39□□□□□ -1.55
CHD1-208ENST00000512392 PNPLA2Q96AD5 504 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 ANKRD9Q96BM1 317 aaPredicted RBP5.39□□□□□ -1.55
CHD1-208ENST00000512392 S100PBPQ96BU1 408 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 NTNG2Q96CW9 530 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 ITCHQ96J02 903 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 RNF2Q99496 336 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 CDCA3Q99618 268 aaPredicted RBP5.39□□□□□ -1.55
CHD1-208ENST00000512392 TRIM51Q9BSJ1 452 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 SSBP3Q9BWW4 388 aaPredicted RBP5.39□□□□□ -1.55
CHD1-208ENST00000512392 ARMC7Q9H6L4 198 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 DUX4Q9UBX2 424 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 SMPXQ9UHP9 88 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 NDUFAF1Q9Y375 327 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 NUP155O75694 1391 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 METP08581 1390 aa5.39□□□□□ -1.55
CHD1-208ENST00000512392 SCRIBQ14160 1630 aa5.38□□□□□ -1.55
CHD1-208ENST00000512392 TRAV8-7A0A075B6U6 113 aa5.38□□□□□ -1.55
CHD1-208ENST00000512392 UNC119BA6NIH7 251 aa5.38□□□□□ -1.55
CHD1-208ENST00000512392 LAD1O00515 517 aa5.38□□□□□ -1.55
CHD1-208ENST00000512392 TOM1O60784 492 aa5.38□□□□□ -1.55
CHD1-208ENST00000512392 MPDU1O75352 247 aa5.38□□□□□ -1.55
CHD1-208ENST00000512392 ATP6V1G2O95670 118 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms