RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 LYRM2Q9NU23 88 aaPredicted RBP10.04□□□□□ -0.8
CPNE4-209ENST00000512055 U3KQ87 197 aa10.04□□□□□ -0.8
CPNE4-209ENST00000512055 ARID2Q68CP9 1835 aa10.04□□□□□ -0.8
CPNE4-209ENST00000512055 CEBPZOSA8MTT3 80 aa10.04□□□□□ -0.8
CPNE4-209ENST00000512055 SOCS6O14544 535 aa10.04□□□□□ -0.8
CPNE4-209ENST00000512055 CYB5BO43169 146 aa10.04□□□□□ -0.8
CPNE4-209ENST00000512055 HOXC11O43248 304 aaPredicted RBP10.04□□□□□ -0.8
CPNE4-209ENST00000512055 TCF21O43680 179 aa10.04□□□□□ -0.8
CPNE4-209ENST00000512055 CSTAP01040 98 aa10.04□□□□□ -0.8
CPNE4-209ENST00000512055 PLGLAQ15195 96 aa10.04□□□□□ -0.8
CPNE4-209ENST00000512055 SGCAQ16586 387 aa10.04□□□□□ -0.8
CPNE4-209ENST00000512055 TOR2AQ5JU69 321 aa10.04□□□□□ -0.8
CPNE4-209ENST00000512055 FBXW12Q6X9E4 464 aa10.04□□□□□ -0.8
CPNE4-209ENST00000512055 SLC51BQ86UW2 128 aa10.04□□□□□ -0.8
CPNE4-209ENST00000512055 VN1R2Q8NFZ6 395 aa10.04□□□□□ -0.8
CPNE4-209ENST00000512055 HCAR2Q8TDS4 363 aa10.04□□□□□ -0.8
CPNE4-209ENST00000512055 SLC38A5Q8WUX1 472 aa10.04□□□□□ -0.8
CPNE4-209ENST00000512055 PRRT1Q99946 306 aa10.04□□□□□ -0.8
CPNE4-209ENST00000512055 DDX31Q9H8H2 851 aaKnown RBP10.04□□□□□ -0.8
CPNE4-209ENST00000512055 THAP10Q9P2Z0 257 aaPredicted RBP10.04□□□□□ -0.8
CPNE4-209ENST00000512055 SLC22A23A1A5C7 686 aa10.04□□□□□ -0.8
CPNE4-209ENST00000512055 C2orf72A6NCS6 295 aa10.04□□□□□ -0.8
CPNE4-209ENST00000512055 FAM227AF5H4B4 570 aa10.04□□□□□ -0.8
CPNE4-209ENST00000512055 GAPDHSO14556 408 aaPredicted RBP10.04□□□□□ -0.8
CPNE4-209ENST00000512055 MPIG6BO95866 241 aa10.04□□□□□ -0.8
CPNE4-209ENST00000512055 RPS5P46782 204 aaKnown RBP10.04□□□□□ -0.8
CPNE4-209ENST00000512055 RPS18P62269 152 aaKnown RBP10.04□□□□□ -0.8
CPNE4-209ENST00000512055 CLEC12BQ2HXU8 276 aa10.04□□□□□ -0.8
CPNE4-209ENST00000512055 PARM1Q6UWI2 310 aa10.04□□□□□ -0.8
CPNE4-209ENST00000512055 SULF2Q8IWU5 870 aa10.04□□□□□ -0.8
CPNE4-209ENST00000512055 UBE2FQ969M7 185 aa10.04□□□□□ -0.8
CPNE4-209ENST00000512055 PNPLA2Q96AD5 504 aa10.04□□□□□ -0.8
CPNE4-209ENST00000512055 PARP12Q9H0J9 701 aaKnown RBP10.04□□□□□ -0.8
CPNE4-209ENST00000512055 PIGMQ9H3S5 423 aa10.04□□□□□ -0.8
CPNE4-209ENST00000512055 MED16Q9Y2X0 877 aa10.04□□□□□ -0.8
CPNE4-209ENST00000512055 TNFSF8P32971 234 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 GLO1Q04760 184 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 CRYZQ08257 329 aaKnown RBP10.03□□□□□ -0.8
CPNE4-209ENST00000512055 NLRC3Q7RTR2 1065 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 CELF2-AS1Q8N7Q2 184 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 B3GNT7Q8NFL0 401 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 RCE1Q9Y256 329 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 OR5H15A6NDH6 313 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 OR5H14A6NHG9 310 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 OR5H1A6NKK0 313 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 DNAJB6O75190 326 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 FOLR1P15328 257 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 GPX2P18283 190 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 BCKDHBP21953 392 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 C9orf152Q5JTZ5 239 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 APOOLQ6UXV4 268 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 OR51T1Q8NGJ9 327 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 ADGRG7Q96K78 797 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 NOL4LQ96MY1 436 aaPredicted RBP10.03□□□□□ -0.8
CPNE4-209ENST00000512055 NECTIN4Q96NY8 510 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 SIDT1Q9NXL6 827 aaKnown RBP10.03□□□□□ -0.8
CPNE4-209ENST00000512055 OSGIN1Q9UJX0 560 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 NAALAD2Q9Y3Q0 740 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 PARP14Q460N5 1801 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 SGK494L7N484 410 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 M0R2Z0 102 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 ZNF780AO75290 641 aaPredicted RBP10.03□□□□□ -0.8
CPNE4-209ENST00000512055 SERPINA5P05154 406 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 OR10J4P0C629 311 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 BMP4P12644 408 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 MTNR1AP48039 350 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 FCN2Q15485 313 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 ZNF750Q32MQ0 723 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 ZNF547Q8IVP9 402 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 PLPP6Q8IY26 295 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 MAML2Q8IZL2 1156 aaPredicted RBP10.03□□□□□ -0.8
CPNE4-209ENST00000512055 HMGCLL1Q8TB92 370 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 SCARB1Q8WTV0 552 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 ZCCHC14Q8WYQ9 949 aaKnown RBP10.03□□□□□ -0.8
CPNE4-209ENST00000512055 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.03□□□□□ -0.8
CPNE4-209ENST00000512055 TMEM14AQ9Y6G1 99 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 SLC22A31A6NKX4 558 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 VSTM5A8MXK1 200 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 GATCO43716 136 aaKnown RBP10.03□□□□□ -0.8
CPNE4-209ENST00000512055 DPM1O60762 260 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 ETHE1O95571 254 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 LY86O95711 162 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 ITGAMP11215 1152 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 APEHP13798 732 aaKnown RBP10.03□□□□□ -0.8
CPNE4-209ENST00000512055 GNSP15586 552 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 H3F3AP84243 136 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 HTR4Q13639 388 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 BPIFCQ8NFQ6 507 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 OR5A2Q8NGI9 324 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 MAP6Q96JE9 813 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 ZDHHC5Q9C0B5 715 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 EPHX3Q9H6B9 360 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 TMEM231Q9H6L2 316 aa10.03□□□□□ -0.8
CPNE4-209ENST00000512055 MTHFD2LQ9H903 347 aaPredicted RBP10.03□□□□□ -0.8
CPNE4-209ENST00000512055 TNS1Q9HBL0 1735 aaKnown RBP10.03□□□□□ -0.8
CPNE4-209ENST00000512055 UNC119BA6NIH7 251 aa10.02□□□□□ -0.8
CPNE4-209ENST00000512055 M0R143 59 aa10.02□□□□□ -0.8
CPNE4-209ENST00000512055 NDUFV2P19404 249 aa10.02□□□□□ -0.8
CPNE4-209ENST00000512055 DRD1P21728 446 aa10.02□□□□□ -0.8
CPNE4-209ENST00000512055 PCSK6P29122 969 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms