RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 TTKP33981 857 aa11.57□□□□□ -0.56
RNF4-215ENST00000511843 ACVR1BP36896 505 aa11.57□□□□□ -0.56
RNF4-215ENST00000511843 CAPZA2P47755 286 aa11.57□□□□□ -0.56
RNF4-215ENST00000511843 SH3BGRP55822 239 aaPredicted RBP11.57□□□□□ -0.56
RNF4-215ENST00000511843 RIPPLY3P57055 190 aa11.57□□□□□ -0.56
RNF4-215ENST00000511843 SELENOWP63302 87 aa11.57□□□□□ -0.56
RNF4-215ENST00000511843 NPRL3Q12980 569 aa11.57□□□□□ -0.56
RNF4-215ENST00000511843 TNK1Q13470 666 aa11.57□□□□□ -0.56
RNF4-215ENST00000511843 C11orf71Q6IPW1 123 aa11.57□□□□□ -0.56
RNF4-215ENST00000511843 NANOGNBQ7Z5D8 188 aa11.57□□□□□ -0.56
RNF4-215ENST00000511843 CPLX4Q7Z7G2 160 aa11.57□□□□□ -0.56
RNF4-215ENST00000511843 DEPDC4Q8N2C3 294 aa11.57□□□□□ -0.56
RNF4-215ENST00000511843 MAPK1IP1LQ8NDC0 245 aa11.57□□□□□ -0.56
RNF4-215ENST00000511843 RBM15BQ8NDT2 890 aaKnown RBP11.57□□□□□ -0.56
RNF4-215ENST00000511843 TMEM239Q8WW34 195 aa11.57□□□□□ -0.56
RNF4-215ENST00000511843 TRMT61AQ96FX7 289 aaKnown RBP11.57□□□□□ -0.56
RNF4-215ENST00000511843 COX4I2Q96KJ9 171 aa11.57□□□□□ -0.56
RNF4-215ENST00000511843 ULBP2Q9BZM5 246 aa11.57□□□□□ -0.56
RNF4-215ENST00000511843 OBP2BQ9NPH6 170 aa11.57□□□□□ -0.56
RNF4-215ENST00000511843 FAIMQ9NVQ4 179 aa11.57□□□□□ -0.56
RNF4-215ENST00000511843 ZNF229Q9UJW7 825 aa11.57□□□□□ -0.56
RNF4-215ENST00000511843 A4GNTQ9UNA3 340 aa11.57□□□□□ -0.56
RNF4-215ENST00000511843 GMNCA6NCL1 334 aa11.56□□□□□ -0.56
RNF4-215ENST00000511843 ZNF726A6NNF4 738 aa11.56□□□□□ -0.56
RNF4-215ENST00000511843 ZNF99A8MXY4 864 aaPredicted RBP11.56□□□□□ -0.56
RNF4-215ENST00000511843 OR7A10O76100 309 aa11.56□□□□□ -0.56
RNF4-215ENST00000511843 HLA-HP01893 362 aa11.56□□□□□ -0.56
RNF4-215ENST00000511843 MT-ND1P03886 318 aa11.56□□□□□ -0.56
RNF4-215ENST00000511843 HIST1H2ABP04908 130 aa11.56□□□□□ -0.56
RNF4-215ENST00000511843 CALCRP30988 508 aa11.56□□□□□ -0.56
RNF4-215ENST00000511843 CSNK1A1P48729 337 aa11.56□□□□□ -0.56
RNF4-215ENST00000511843 IDH3GP51553 393 aaPredicted RBP11.56□□□□□ -0.56
RNF4-215ENST00000511843 PSME3P61289 254 aa11.56□□□□□ -0.56
RNF4-215ENST00000511843 NAAAQ02083 359 aa11.56□□□□□ -0.56
RNF4-215ENST00000511843 RPL18Q07020 188 aaKnown RBP11.56□□□□□ -0.56
RNF4-215ENST00000511843 ZP4Q12836 540 aa11.56□□□□□ -0.56
RNF4-215ENST00000511843 CLEC12BQ2HXU8 276 aa11.56□□□□□ -0.56
RNF4-215ENST00000511843 AGAP6Q5VW22 663 aa11.56□□□□□ -0.56
RNF4-215ENST00000511843 VHLLQ6RSH7 139 aa11.56□□□□□ -0.56
RNF4-215ENST00000511843 HACD2Q6Y1H2 254 aa11.56□□□□□ -0.56
RNF4-215ENST00000511843 HIST3H2AQ7L7L0 130 aa11.56□□□□□ -0.56
RNF4-215ENST00000511843 MDP1Q86V88 176 aa11.56□□□□□ -0.56
RNF4-215ENST00000511843 FBXL14Q8N1E6 418 aa11.56□□□□□ -0.56
RNF4-215ENST00000511843 MUC15Q8N387 334 aa11.56□□□□□ -0.56
RNF4-215ENST00000511843 RNF148Q8N7C7 305 aa11.56□□□□□ -0.56
RNF4-215ENST00000511843 ANKK1Q8NFD2 765 aa11.56□□□□□ -0.56
RNF4-215ENST00000511843 MOSPD2Q8NHP6 518 aa11.56□□□□□ -0.56
RNF4-215ENST00000511843 MAGEE2Q8TD90 523 aaPredicted RBP11.56□□□□□ -0.56
RNF4-215ENST00000511843 HIST1H2ACQ93077 130 aa11.56□□□□□ -0.56
RNF4-215ENST00000511843 HSH2DQ96JZ2 352 aa11.56□□□□□ -0.56
RNF4-215ENST00000511843 HOPXQ9BPY8 73 aaPredicted RBP11.56□□□□□ -0.56
RNF4-215ENST00000511843 BDH2Q9BUT1 245 aa11.56□□□□□ -0.56
RNF4-215ENST00000511843 SLC19A3Q9BZV2 496 aa11.56□□□□□ -0.56
RNF4-215ENST00000511843 NSRP1Q9H0G5 558 aaKnown RBP11.56□□□□□ -0.56
RNF4-215ENST00000511843 NIPBLQ6KC79 2804 aaeCLIP11.55□□□□□ -0.56
RNF4-215ENST00000511843 FFAR1O14842 300 aa11.55□□□□□ -0.56
RNF4-215ENST00000511843 TMCC2O75069 709 aa11.55□□□□□ -0.56
RNF4-215ENST00000511843 LY6G6DO95868 133 aa11.55□□□□□ -0.56
RNF4-215ENST00000511843 SERPINA1P01009 418 aa11.55□□□□□ -0.56
RNF4-215ENST00000511843 IGLV1-44P01699 117 aa11.55□□□□□ -0.56
RNF4-215ENST00000511843 CD79AP11912 226 aa11.55□□□□□ -0.56
RNF4-215ENST00000511843 AQP2P41181 271 aa11.55□□□□□ -0.56
RNF4-215ENST00000511843 RBM34P42696 430 aaKnown RBP11.55□□□□□ -0.56
RNF4-215ENST00000511843 RUNX1T1Q06455 604 aa11.55□□□□□ -0.56
RNF4-215ENST00000511843 PIGFQ07326 219 aa11.55□□□□□ -0.56
RNF4-215ENST00000511843 CLEC9AQ6UXN8 241 aa11.55□□□□□ -0.56
RNF4-215ENST00000511843 ZNF813Q6ZN06 617 aa11.55□□□□□ -0.56
RNF4-215ENST00000511843 BIVMQ86UB2 503 aa11.55□□□□□ -0.56
RNF4-215ENST00000511843 LZICQ8WZA0 190 aa11.55□□□□□ -0.56
RNF4-215ENST00000511843 TMEM54Q969K7 222 aa11.55□□□□□ -0.56
RNF4-215ENST00000511843 FAM162AQ96A26 154 aa11.55□□□□□ -0.56
RNF4-215ENST00000511843 CMTM5Q96DZ9 223 aa11.55□□□□□ -0.56
RNF4-215ENST00000511843 FBXO17Q96EF6 278 aa11.55□□□□□ -0.56
RNF4-215ENST00000511843 SGTBQ96EQ0 304 aa11.55□□□□□ -0.56
RNF4-215ENST00000511843 LRR1Q96L50 414 aa11.55□□□□□ -0.56
RNF4-215ENST00000511843 PRRC1Q96M27 445 aa11.55□□□□□ -0.56
RNF4-215ENST00000511843 HS6ST2Q96MM7 605 aa11.55□□□□□ -0.56
RNF4-215ENST00000511843 KCTD14Q9BQ13 255 aaPredicted RBP11.55□□□□□ -0.56
RNF4-215ENST00000511843 KCNS3Q9BQ31 491 aa11.55□□□□□ -0.56
RNF4-215ENST00000511843 B3GAT2Q9NPZ5 323 aa11.55□□□□□ -0.56
RNF4-215ENST00000511843 MAN2C1Q9NTJ4 1040 aa11.55□□□□□ -0.56
RNF4-215ENST00000511843 CBLN4Q9NTU7 201 aa11.55□□□□□ -0.56
RNF4-215ENST00000511843 CRNNQ9UBG3 495 aaPredicted RBP11.55□□□□□ -0.56
RNF4-215ENST00000511843 EGFL7Q9UHF1 273 aa11.55□□□□□ -0.56
RNF4-215ENST00000511843 POFUT2Q9Y2G5 429 aa11.55□□□□□ -0.56
RNF4-215ENST00000511843 YLPM1P49750 1951 aaKnown RBP11.55□□□□□ -0.56
RNF4-215ENST00000511843 RNF223E7ERA6 249 aa11.54□□□□□ -0.56
RNF4-215ENST00000511843 SSX4O60224 188 aa11.54□□□□□ -0.56
RNF4-215ENST00000511843 LY6HO94772 140 aa11.54□□□□□ -0.56
RNF4-215ENST00000511843 CRYAAP02489 173 aa11.54□□□□□ -0.56
RNF4-215ENST00000511843 IFNW1P05000 195 aa11.54□□□□□ -0.56
RNF4-215ENST00000511843 PATE4P0C8F1 98 aa11.54□□□□□ -0.56
RNF4-215ENST00000511843 IFI30P13284 250 aa11.54□□□□□ -0.56
RNF4-215ENST00000511843 CBR1P16152 277 aa11.54□□□□□ -0.56
RNF4-215ENST00000511843 MYBPC1Q00872 1141 aa11.54□□□□□ -0.56
RNF4-215ENST00000511843 LAPTM4AQ15012 233 aa11.54□□□□□ -0.56
RNF4-215ENST00000511843 FKBP9P1Q75LS8 142 aa11.54□□□□□ -0.56
RNF4-215ENST00000511843 CBLL1Q75N03 491 aa11.54□□□□□ -0.56
RNF4-215ENST00000511843 TSEN54Q7Z6J9 526 aaKnown RBP11.54□□□□□ -0.56
RNF4-215ENST00000511843 IGFN1Q86VF2 1251 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms