RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 CNPY4Q8N129 248 aa16.13■□□□□ 0.17
HMGCS1-206ENST00000511774 TESCQ96BS2 214 aa16.13■□□□□ 0.17
HMGCS1-206ENST00000511774 TEX37Q96LM6 180 aa16.13■□□□□ 0.17
HMGCS1-206ENST00000511774 CCDC115Q96NT0 180 aa16.13■□□□□ 0.17
HMGCS1-206ENST00000511774 RSPO3Q9BXY4 272 aaPredicted RBP16.13■□□□□ 0.17
HMGCS1-206ENST00000511774 OR51B6Q9H340 312 aa16.13■□□□□ 0.17
HMGCS1-206ENST00000511774 AKTIPQ9H8T0 292 aa16.13■□□□□ 0.17
HMGCS1-206ENST00000511774 SLC7A8Q9UHI5 535 aa16.13■□□□□ 0.17
HMGCS1-206ENST00000511774 ZNF443Q9Y2A4 671 aaPredicted RBP16.13■□□□□ 0.17
HMGCS1-206ENST00000511774 IGKV1D-42A0A075B6H8 117 aa16.12■□□□□ 0.17
HMGCS1-206ENST00000511774 ZNF250P15622 560 aa16.12■□□□□ 0.17
HMGCS1-206ENST00000511774 MAKP20794 623 aa16.12■□□□□ 0.17
HMGCS1-206ENST00000511774 GRPRP30550 384 aa16.12■□□□□ 0.17
HMGCS1-206ENST00000511774 RAD52P43351 418 aa16.12■□□□□ 0.17
HMGCS1-206ENST00000511774 COPZ1P61923 177 aa16.12■□□□□ 0.17
HMGCS1-206ENST00000511774 RPS26P11Q5JNZ5 115 aaPredicted RBP16.12■□□□□ 0.17
HMGCS1-206ENST00000511774 TMEM255AQ5JRV8 349 aa16.12■□□□□ 0.17
HMGCS1-206ENST00000511774 RGS7BPQ6MZT1 257 aaPredicted RBP16.12■□□□□ 0.17
HMGCS1-206ENST00000511774 TMEM154Q6P9G4 183 aa16.12■□□□□ 0.17
HMGCS1-206ENST00000511774 SYT14Q8NB59 555 aa16.12■□□□□ 0.17
HMGCS1-206ENST00000511774 PKP2Q99959 881 aa16.12■□□□□ 0.17
HMGCS1-206ENST00000511774 NKIRAS2Q9NYR9 191 aa16.12■□□□□ 0.17
HMGCS1-206ENST00000511774 NUP50Q9UKX7 468 aa16.12■□□□□ 0.17
HMGCS1-206ENST00000511774 A0A096LPI6 279 aa16.11■□□□□ 0.17
HMGCS1-206ENST00000511774 LOC102725191A0A1B0GVB3 256 aa16.11■□□□□ 0.17
HMGCS1-206ENST00000511774 CCDC154A6NI56 674 aa16.11■□□□□ 0.17
HMGCS1-206ENST00000511774 CLDN25C9JDP6 229 aa16.11■□□□□ 0.17
HMGCS1-206ENST00000511774 AIM2O14862 343 aa16.11■□□□□ 0.17
HMGCS1-206ENST00000511774 RAB36O95755 333 aa16.11■□□□□ 0.17
HMGCS1-206ENST00000511774 NCF2P19878 526 aaPredicted RBP16.11■□□□□ 0.17
HMGCS1-206ENST00000511774 GCH1P30793 250 aa16.11■□□□□ 0.17
HMGCS1-206ENST00000511774 MVDP53602 400 aa16.11■□□□□ 0.17
HMGCS1-206ENST00000511774 MAD2L1Q13257 205 aaPredicted RBP16.11■□□□□ 0.17
HMGCS1-206ENST00000511774 TSTQ16762 297 aaKnown RBP16.11■□□□□ 0.17
HMGCS1-206ENST00000511774 LIN52Q52LA3 116 aa16.11■□□□□ 0.17
HMGCS1-206ENST00000511774 SPRNQ5BIV9 151 aa16.11■□□□□ 0.17
HMGCS1-206ENST00000511774 JAZF1Q86VZ6 243 aa16.11■□□□□ 0.17
HMGCS1-206ENST00000511774 SKA3Q8IX90 412 aa16.11■□□□□ 0.17
HMGCS1-206ENST00000511774 MGARPQ8TDB4 240 aa16.11■□□□□ 0.17
HMGCS1-206ENST00000511774 FOXB1Q99853 325 aa16.11■□□□□ 0.17
HMGCS1-206ENST00000511774 GAL3ST1Q99999 423 aa16.11■□□□□ 0.17
HMGCS1-206ENST00000511774 ZMAT3Q9HA38 289 aaKnown RBP16.11■□□□□ 0.17
HMGCS1-206ENST00000511774 SLC6A13Q9NSD5 602 aa16.11■□□□□ 0.17
HMGCS1-206ENST00000511774 DCAF16Q9NXF7 216 aa16.11■□□□□ 0.17
HMGCS1-206ENST00000511774 PLEK2Q9NYT0 353 aa16.11■□□□□ 0.17
HMGCS1-206ENST00000511774 POFUT2Q9Y2G5 429 aa16.11■□□□□ 0.17
HMGCS1-206ENST00000511774 TRAPPC2LH3BP13 241 aa16.1■□□□□ 0.17
HMGCS1-206ENST00000511774 SERPINA5P05154 406 aa16.1■□□□□ 0.17
HMGCS1-206ENST00000511774 KLF3P57682 345 aaPredicted RBP16.1■□□□□ 0.17
HMGCS1-206ENST00000511774 GLO1Q04760 184 aa16.1■□□□□ 0.17
HMGCS1-206ENST00000511774 CAMK2DQ13557 499 aa16.1■□□□□ 0.17
HMGCS1-206ENST00000511774 SMU1Q2TAY7 513 aa16.1■□□□□ 0.17
HMGCS1-206ENST00000511774 PCGF3Q3KNV8 242 aa16.1■□□□□ 0.17
HMGCS1-206ENST00000511774 RNF220Q5VTB9 566 aa16.1■□□□□ 0.17
HMGCS1-206ENST00000511774 H1FNTQ75WM6 255 aaPredicted RBP16.1■□□□□ 0.17
HMGCS1-206ENST00000511774 RHOUQ7L0Q8 258 aa16.1■□□□□ 0.17
HMGCS1-206ENST00000511774 HOMEZQ8IX15 550 aa16.1■□□□□ 0.17
HMGCS1-206ENST00000511774 POP5Q969H6 163 aaKnown RBP16.1■□□□□ 0.17
HMGCS1-206ENST00000511774 APOPT1Q96IL0 206 aa16.1■□□□□ 0.17
HMGCS1-206ENST00000511774 LRR1Q96L50 414 aa16.1■□□□□ 0.17
HMGCS1-206ENST00000511774 MKS1Q9NXB0 559 aa16.1■□□□□ 0.17
HMGCS1-206ENST00000511774 UBAP1Q9NZ09 502 aa16.1■□□□□ 0.17
HMGCS1-206ENST00000511774 BTNL2Q9UIR0 455 aa16.1■□□□□ 0.17
HMGCS1-206ENST00000511774 GTF2E2P29084 291 aaKnown RBP16.09■□□□□ 0.17
HMGCS1-206ENST00000511774 IL12AP29459 219 aa16.09■□□□□ 0.17
HMGCS1-206ENST00000511774 MMEL1Q495T6 779 aa16.09■□□□□ 0.17
HMGCS1-206ENST00000511774 ARMCX4Q5H9R4 360 aa16.09■□□□□ 0.17
HMGCS1-206ENST00000511774 WDR88Q6ZMY6 472 aa16.09■□□□□ 0.17
HMGCS1-206ENST00000511774 RETREG3Q86VR2 466 aa16.09■□□□□ 0.17
HMGCS1-206ENST00000511774 LRRC34Q8IZ02 419 aa16.09■□□□□ 0.17
HMGCS1-206ENST00000511774 VPS37AQ8NEZ2 397 aa16.09■□□□□ 0.17
HMGCS1-206ENST00000511774 SYNPRQ8TBG9 265 aa16.09■□□□□ 0.17
HMGCS1-206ENST00000511774 WFDC12Q8WWY7 111 aa16.09■□□□□ 0.17
HMGCS1-206ENST00000511774 TMIGD2Q96BF3 282 aa16.09■□□□□ 0.17
HMGCS1-206ENST00000511774 KLHL14Q9P2G3 628 aa16.09■□□□□ 0.17
HMGCS1-206ENST00000511774 PURGQ9UJV8 347 aaKnown RBP16.09■□□□□ 0.17
HMGCS1-206ENST00000511774 PRDM4Q9UKN5 801 aa16.09■□□□□ 0.17
HMGCS1-206ENST00000511774 RYR3Q15413 4870 aa16.08■□□□□ 0.17
HMGCS1-206ENST00000511774 PPIAL4EA0A075B759 164 aa16.08■□□□□ 0.16
HMGCS1-206ENST00000511774 PPIAL4CA0A0B4J2A2 164 aa16.08■□□□□ 0.16
HMGCS1-206ENST00000511774 PPIAL4DF5H284 164 aa16.08■□□□□ 0.16
HMGCS1-206ENST00000511774 CLDN34H7C241 214 aa16.08■□□□□ 0.16
HMGCS1-206ENST00000511774 ITM2AO43736 263 aa16.08■□□□□ 0.16
HMGCS1-206ENST00000511774 PPIAL4FP0DN26 164 aa16.08■□□□□ 0.16
HMGCS1-206ENST00000511774 ETFAP13804 333 aa16.08■□□□□ 0.16
HMGCS1-206ENST00000511774 NME5P56597 212 aa16.08■□□□□ 0.16
HMGCS1-206ENST00000511774 SEC61A1P61619 476 aaKnown RBP16.08■□□□□ 0.16
HMGCS1-206ENST00000511774 FAM69AQ5T7M9 428 aa16.08■□□□□ 0.16
HMGCS1-206ENST00000511774 C6orf89Q6UWU4 347 aa16.08■□□□□ 0.16
HMGCS1-206ENST00000511774 COMTD1Q86VU5 262 aa16.08■□□□□ 0.16
HMGCS1-206ENST00000511774 UEVLDQ8IX04 471 aa16.08■□□□□ 0.16
HMGCS1-206ENST00000511774 GLB1L3Q8NCI6 653 aaPredicted RBP16.08■□□□□ 0.16
HMGCS1-206ENST00000511774 CCL17Q92583 94 aa16.08■□□□□ 0.16
HMGCS1-206ENST00000511774 RAB1CQ92928 201 aa16.08■□□□□ 0.16
HMGCS1-206ENST00000511774 SLC25A28Q96A46 364 aa16.08■□□□□ 0.16
HMGCS1-206ENST00000511774 SLC41A3Q96GZ6 507 aa16.08■□□□□ 0.16
HMGCS1-206ENST00000511774 ULBP2Q9BZM5 246 aa16.08■□□□□ 0.16
HMGCS1-206ENST00000511774 DENND2DQ9H6A0 471 aaPredicted RBP16.08■□□□□ 0.16
HMGCS1-206ENST00000511774 SAP30LQ9HAJ7 183 aa16.08■□□□□ 0.16
HMGCS1-206ENST00000511774 E9PBE3 544 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms