RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 PABPC4LP0CB38 370 aaKnown RBP4.38□□□□□ -1.71
NEK1-204ENST00000509912 CHATP28329 748 aa4.38□□□□□ -1.71
NEK1-204ENST00000509912 DUTP33316 252 aaKnown RBP4.38□□□□□ -1.71
NEK1-204ENST00000509912 RCVRNP35243 200 aa4.38□□□□□ -1.71
NEK1-204ENST00000509912 SPRP35270 261 aaPredicted RBP4.38□□□□□ -1.71
NEK1-204ENST00000509912 MAP3K8P41279 467 aa4.38□□□□□ -1.71
NEK1-204ENST00000509912 CASP3P42574 277 aa4.38□□□□□ -1.71
NEK1-204ENST00000509912 ARG2P78540 354 aa4.38□□□□□ -1.71
NEK1-204ENST00000509912 HPCAP84074 193 aa4.38□□□□□ -1.71
NEK1-204ENST00000509912 POU3F1Q03052 451 aaPredicted RBP4.38□□□□□ -1.71
NEK1-204ENST00000509912 SPCS2Q15005 226 aa4.38□□□□□ -1.71
NEK1-204ENST00000509912 ZNF239Q16600 458 aaKnown RBP4.38□□□□□ -1.71
NEK1-204ENST00000509912 ACSBG2Q5FVE4 666 aa4.38□□□□□ -1.71
NEK1-204ENST00000509912 ACER2Q5QJU3 275 aa4.38□□□□□ -1.71
NEK1-204ENST00000509912 FRG2Q64ET8 278 aa4.38□□□□□ -1.71
NEK1-204ENST00000509912 PLXDC2Q6UX71 529 aa4.38□□□□□ -1.71
NEK1-204ENST00000509912 AKAP14Q86UN6 197 aa4.38□□□□□ -1.71
NEK1-204ENST00000509912 Q8N1X5 172 aa4.38□□□□□ -1.71
NEK1-204ENST00000509912 ARFGAP2Q8N6H7 521 aa4.38□□□□□ -1.71
NEK1-204ENST00000509912 CHDHQ8NE62 594 aaPredicted RBP4.38□□□□□ -1.71
NEK1-204ENST00000509912 OR51Q1Q8NH59 317 aa4.38□□□□□ -1.71
NEK1-204ENST00000509912 STAG3L4Q8TBR4 150 aa4.38□□□□□ -1.71
NEK1-204ENST00000509912 FAM110BQ8TC76 370 aa4.38□□□□□ -1.71
NEK1-204ENST00000509912 RFT1Q96AA3 541 aa4.38□□□□□ -1.71
NEK1-204ENST00000509912 MS4A6EQ96DS6 147 aa4.38□□□□□ -1.71
NEK1-204ENST00000509912 L3HYPDHQ96EM0 354 aa4.38□□□□□ -1.71
NEK1-204ENST00000509912 URB1-AS1Q96HZ7 61 aa4.38□□□□□ -1.71
NEK1-204ENST00000509912 ARL5BQ96KC2 179 aa4.38□□□□□ -1.71
NEK1-204ENST00000509912 GAL3ST4Q96RP7 486 aa4.38□□□□□ -1.71
NEK1-204ENST00000509912 RBBP8Q99708 897 aa4.38□□□□□ -1.71
NEK1-204ENST00000509912 NRTNQ99748 197 aa4.38□□□□□ -1.71
NEK1-204ENST00000509912 DPH7Q9BTV6 452 aa4.38□□□□□ -1.71
NEK1-204ENST00000509912 MS4A8Q9BY19 250 aa4.38□□□□□ -1.71
NEK1-204ENST00000509912 MRPL39Q9NYK5 338 aaKnown RBP4.38□□□□□ -1.71
NEK1-204ENST00000509912 WWOXQ9NZC7 414 aa4.38□□□□□ -1.71
NEK1-204ENST00000509912 AHSPQ9NZD4 102 aa4.38□□□□□ -1.71
NEK1-204ENST00000509912 RBMX2Q9Y388 322 aaKnown RBP4.38□□□□□ -1.71
NEK1-204ENST00000509912 PAM16Q9Y3D7 125 aa4.38□□□□□ -1.71
NEK1-204ENST00000509912 POLEQ07864 2286 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 A0A0A6YYD5 115 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 LRIT2A6NDA9 550 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 HCRTR1O43613 425 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 MT-ATP6P00846 226 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 SNRPAP09012 282 aaKnown RBP4.37□□□□□ -1.71
NEK1-204ENST00000509912 ERVK-10P10266 1014 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 MNDAP41218 407 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 NKX2-5P52952 324 aaPredicted RBP4.37□□□□□ -1.71
NEK1-204ENST00000509912 SLC18A1P54219 525 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 NAGLUP54802 743 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 PKNOX1P55347 436 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 KCNK10P57789 538 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 VBP1P61758 197 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 RPS13P62277 151 aaKnown RBP4.37□□□□□ -1.71
NEK1-204ENST00000509912 OR52E8Q6IFG1 317 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 UGT2A3Q6UWM9 527 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 SLC22A16Q86VW1 577 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.37□□□□□ -1.71
NEK1-204ENST00000509912 ZNF611Q8N823 705 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 EXPH5Q8NEV8 1989 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 OR6S1Q8NH40 331 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 RNF128Q8TEB7 428 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 TAAR8Q969N4 342 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 ZNF317Q96PQ6 595 aaPredicted RBP4.37□□□□□ -1.71
NEK1-204ENST00000509912 WACQ9BTA9 647 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 SFXN3Q9BWM7 321 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 ROPN1BQ9BZX4 212 aaPredicted RBP4.37□□□□□ -1.71
NEK1-204ENST00000509912 ROPN1Q9HAT0 212 aaPredicted RBP4.37□□□□□ -1.71
NEK1-204ENST00000509912 SEC14L3Q9UDX4 400 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 CLEC4AQ9UMR7 237 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 GPR132Q9UNW8 380 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 DMRT1Q9Y5R6 373 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 AP4B1Q9Y6B7 739 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 NBPF19A0A087WUL8 3843 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 TRGV8A0A0C4DH27 118 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 HNRNPCL2B2RXH8 293 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 RGS14O43566 566 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 ATP5HO75947 161 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 HSMCR30P0CW71 290 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 MAGP20916 626 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 NT5EP21589 574 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 TCEA1P23193 301 aaKnown RBP4.37□□□□□ -1.71
NEK1-204ENST00000509912 HTR1EP28566 365 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 SOAT1P35610 550 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 GPX6P59796 221 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 STX1BP61266 288 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 PTGR1Q14914 329 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 MAPRE2Q15555 327 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 ETFDHQ16134 617 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 VWA2Q5GFL6 755 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 AADACL4Q5VUY2 407 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 OR2A2Q6IF42 318 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 USP43Q70EL4 1123 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 CROCCP2Q86T23 111 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 TIGD4Q8IY51 512 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 ST13P4Q8IZP2 240 aaPredicted RBP4.37□□□□□ -1.71
NEK1-204ENST00000509912 RIBC1Q8N443 379 aaPredicted RBP4.37□□□□□ -1.71
NEK1-204ENST00000509912 DNAAF3Q8N9W5 541 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 APCDD1LQ8NCL9 501 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 FBXO36Q8NEA4 188 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 LKAAEAR1Q8TD35 194 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms