RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 UQCRFS1P47985 274 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 SLC6A9P48067 706 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 TUBP50607 506 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 P2RX1P51575 399 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 INHBCP55103 352 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 TAS2R40P59535 323 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 SERF2P84101 59 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 CXCL9Q07325 125 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 MALLQ13021 153 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 ILKQ13418 452 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 DOC2BQ14184 412 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 SLC35D3Q5M8T2 416 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 CST9LP1Q5W188 147 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 OR52W1Q6IF63 320 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 SCIMPQ6UWF3 145 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 TUSC5Q8IXB3 177 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 DDX60Q8IY21 1712 aaKnown RBP3.32□□□□□ -1.88
USP53-205ENST00000509769 LRRC52Q8N7C0 313 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 ZNF383Q8NA42 475 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 RNF149Q8NC42 400 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 IL17RDQ8NFM7 739 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 OR5R1Q8NH85 324 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 LRRN4Q8WUT4 740 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 ATOH1Q92858 354 aaPredicted RBP3.32□□□□□ -1.88
USP53-205ENST00000509769 UCN3Q969E3 161 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 SLCO4A1Q96BD0 722 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 EBF4Q9BQW3 602 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 DPH7Q9BTV6 452 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 GABARAPL1Q9H0R8 117 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 ST6GALNAC4Q9H4F1 302 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 ZNF430Q9H8G1 570 aaPredicted RBP3.32□□□□□ -1.88
USP53-205ENST00000509769 SPATA6Q9NWH7 488 aaPredicted RBP3.32□□□□□ -1.88
USP53-205ENST00000509769 LHX3Q9UBR4 397 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 PRODH2Q9UF12 536 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 NAT8Q9UHE5 227 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 MUTYHQ9UIF7 546 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 RIMS3Q9UJD0 308 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 CYSLTR1Q9Y271 337 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 MEIKINA0A087WXM9 373 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 EDDM13A0A1B0GTR0 161 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 TMEM129A0AVI4 362 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 KLRG2A4D1S0 409 aaPredicted RBP3.32□□□□□ -1.88
USP53-205ENST00000509769 OOEPA6NGQ2 149 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 ZNF724A8MTY0 619 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 CDIPTO14735 213 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 PRKRAO75569 313 aaKnown RBP3.32□□□□□ -1.88
USP53-205ENST00000509769 CBR3O75828 277 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 AKR7A3O95154 331 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 EOMESO95936 686 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 CA2P00918 260 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 THP07101 528 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 DBHP09172 617 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 MPC1LP0DKB6 136 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 LIPCP11150 499 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 ABOP16442 354 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 ATF1P18846 271 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 GLRA1P23415 457 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 RAB38P57729 211 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 BPIFB3P59826 476 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 SNRPGP62308 76 aaKnown RBP3.32□□□□□ -1.88
USP53-205ENST00000509769 CSNK1G2P78368 415 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 JAG1P78504 1218 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 DCDP81605 110 aaKnown RBP3.32□□□□□ -1.88
USP53-205ENST00000509769 NAAAQ02083 359 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 ADIGQ0VDE8 80 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 SGCGQ13326 291 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 ENPP2Q13822 863 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 ZNF345Q14585 488 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 AGERQ15109 404 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 MIIPQ5JXC2 388 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 NOL9Q5SY16 702 aaKnown RBP3.32□□□□□ -1.88
USP53-205ENST00000509769 SHEQ5VZ18 495 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 MRM1Q6IN84 353 aaKnown RBP3.32□□□□□ -1.88
USP53-205ENST00000509769 ZDHHC24Q6UX98 284 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 Q7L0L9 218 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 PIM3Q86V86 326 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 LRRTM4Q86VH4 590 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 TEX26Q8N6G2 289 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 TEX29Q8N6K0 151 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 CSNK1A1LQ8N752 337 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 SLC35G3Q8N808 338 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 ZDHHC22Q8N966 263 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 NAT8LQ8N9F0 302 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 OR10A7Q8NGE5 316 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 OR5M1Q8NGP8 315 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 GOT1L1Q8NHS2 421 aaPredicted RBP3.32□□□□□ -1.88
USP53-205ENST00000509769 SYNPRQ8TBG9 265 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 SUSD6Q92537 303 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 ATG4CQ96DT6 458 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 KIRREL1Q96J84 757 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 LRIG1Q96JA1 1093 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 C3orf30Q96M34 536 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 FCRL5Q96RD9 977 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 LMF2Q9BU23 707 aaKnown RBP3.32□□□□□ -1.88
USP53-205ENST00000509769 MRPL13Q9BYD1 178 aaKnown RBP3.32□□□□□ -1.88
USP53-205ENST00000509769 PBX4Q9BYU1 374 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 CHRNA10Q9GZZ6 450 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 ZNF442Q9H7R0 627 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 AKTIPQ9H8T0 292 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 NANOGQ9H9S0 305 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms