RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 ACTG2P63267 376 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 BDH1Q02338 343 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 IL18Q14116 193 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 GGTLC2Q14390 218 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 CDONQ4KMG0 1287 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 LYPD8Q6UX82 237 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 UTS2BQ765I0 119 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 OR2T4Q8NH00 348 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 SLC22A8Q8TCC7 542 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 AP3S1Q92572 193 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 NXPE2Q96DL1 559 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 TXNDC15Q96J42 360 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 UBL7Q96S82 380 aaPredicted RBP13.41□□□□□ -0.26
PHF3-209ENST00000509330 RASD1Q9Y272 281 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 PLPP3O14495 311 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 IFNGR1P15260 489 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 TCN2P20062 427 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 KLK2P20151 261 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 F8A1P23610 371 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 MYL9P24844 172 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 TMED10P49755 219 aaKnown RBP13.41□□□□□ -0.26
PHF3-209ENST00000509330 GPAT4Q86UL3 456 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 EXD3Q8N9H8 876 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 SMIM19Q96E16 107 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 MED18Q9BUE0 208 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 POLHQ9Y253 713 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 AK6Q9Y3D8 172 aaKnown RBP13.41□□□□□ -0.26
PHF3-209ENST00000509330 PCDHGB7Q9Y5F8 929 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 FREM3P0C091 2139 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 A0A1W2PQ09 198 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 SPARCP09486 303 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 RPL27P61353 136 aaKnown RBP13.41□□□□□ -0.26
PHF3-209ENST00000509330 INSM1Q01101 510 aaPredicted RBP13.41□□□□□ -0.26
PHF3-209ENST00000509330 RNASE12Q5GAN4 147 aaKnown RBP13.41□□□□□ -0.26
PHF3-209ENST00000509330 SLC35D3Q5M8T2 416 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 LRRN1Q6UXK5 716 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 MDGA2Q7Z553 956 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 TIGD4Q8IY51 512 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 CELF2-AS1Q8N7Q2 184 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 OR11G2Q8NGC1 345 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 OR8K3Q8NH51 312 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 OIT3Q8WWZ8 545 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 SRRQ9GZT4 340 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 C12orf10Q9HB07 376 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 DMXL1Q9Y485 3027 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 NSG1A0A0A6YYJ2 146 aa13.4□□□□□ -0.26
PHF3-209ENST00000509330 IMPDH2P12268 514 aa13.4□□□□□ -0.26
PHF3-209ENST00000509330 FOLR3P41439 243 aa13.4□□□□□ -0.26
PHF3-209ENST00000509330 TAS2R43P59537 309 aa13.4□□□□□ -0.26
PHF3-209ENST00000509330 TLE3Q04726 772 aa13.4□□□□□ -0.26
PHF3-209ENST00000509330 ZNF468Q5VIY5 522 aaPredicted RBP13.4□□□□□ -0.26
PHF3-209ENST00000509330 LIPNQ5VXI9 398 aa13.4□□□□□ -0.26
PHF3-209ENST00000509330 B3GNTL1Q67FW5 361 aaPredicted RBP13.4□□□□□ -0.26
PHF3-209ENST00000509330 GDPD3Q7L5L3 318 aa13.4□□□□□ -0.26
PHF3-209ENST00000509330 TIPARPQ7Z3E1 657 aaKnown RBP13.4□□□□□ -0.26
PHF3-209ENST00000509330 CADM3Q8N126 398 aa13.4□□□□□ -0.26
PHF3-209ENST00000509330 OR4K17Q8NGC6 315 aa13.4□□□□□ -0.26
PHF3-209ENST00000509330 ELP5Q8TE02 316 aa13.4□□□□□ -0.26
PHF3-209ENST00000509330 GNRHR2Q96P88 292 aa13.4□□□□□ -0.26
PHF3-209ENST00000509330 MRM2Q9UI43 246 aaKnown RBP13.4□□□□□ -0.26
PHF3-209ENST00000509330 PPIEQ9UNP9 301 aaKnown RBP13.4□□□□□ -0.26
PHF3-209ENST00000509330 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.4□□□□□ -0.26
PHF3-209ENST00000509330 ZFPL1O95159 310 aa13.4□□□□□ -0.26
PHF3-209ENST00000509330 WNT11O96014 354 aa13.4□□□□□ -0.26
PHF3-209ENST00000509330 CCL3P10147 92 aa13.4□□□□□ -0.26
PHF3-209ENST00000509330 IL7P13232 177 aa13.4□□□□□ -0.26
PHF3-209ENST00000509330 AVPR2P30518 371 aa13.4□□□□□ -0.26
PHF3-209ENST00000509330 PUDPQ08623 228 aa13.4□□□□□ -0.26
PHF3-209ENST00000509330 RAB11FIP2Q7L804 512 aa13.4□□□□□ -0.26
PHF3-209ENST00000509330 NUP54Q7Z3B4 507 aa13.4□□□□□ -0.26
PHF3-209ENST00000509330 MISPQ8IVT2 679 aa13.4□□□□□ -0.26
PHF3-209ENST00000509330 ZNF433Q8N7K0 673 aaPredicted RBP13.4□□□□□ -0.26
PHF3-209ENST00000509330 LRFN5Q96NI6 719 aa13.4□□□□□ -0.26
PHF3-209ENST00000509330 NEDD4LQ96PU5 975 aa13.4□□□□□ -0.26
PHF3-209ENST00000509330 OR5B2Q96R09 309 aa13.4□□□□□ -0.26
PHF3-209ENST00000509330 TBC1D24Q9ULP9 559 aa13.4□□□□□ -0.26
PHF3-209ENST00000509330 PRSS37A4D1T9 235 aa13.39□□□□□ -0.27
PHF3-209ENST00000509330 TFECO14948 347 aaPredicted RBP13.39□□□□□ -0.27
PHF3-209ENST00000509330 JMJD7P0C870 316 aa13.39□□□□□ -0.27
PHF3-209ENST00000509330 ETV6P41212 452 aa13.39□□□□□ -0.27
PHF3-209ENST00000509330 TRA2AQ13595 282 aaKnown RBP eCLIP13.39□□□□□ -0.27
PHF3-209ENST00000509330 TOMM20Q15388 145 aa13.39□□□□□ -0.27
PHF3-209ENST00000509330 DCAF12Q5T6F0 453 aa13.39□□□□□ -0.27
PHF3-209ENST00000509330 SLC16A9Q7RTY1 509 aa13.39□□□□□ -0.27
PHF3-209ENST00000509330 TMEM156Q8N614 296 aa13.39□□□□□ -0.27
PHF3-209ENST00000509330 SAMD12Q8N8I0 201 aa13.39□□□□□ -0.27
PHF3-209ENST00000509330 OR2Y1Q8NGV0 311 aa13.39□□□□□ -0.27
PHF3-209ENST00000509330 NSMAFQ92636 917 aa13.39□□□□□ -0.27
PHF3-209ENST00000509330 PPP1R14AQ96A00 147 aa13.39□□□□□ -0.27
PHF3-209ENST00000509330 INTS14Q96SY0 518 aa13.39□□□□□ -0.27
PHF3-209ENST00000509330 NKX3-1Q99801 234 aaPredicted RBP13.39□□□□□ -0.27
PHF3-209ENST00000509330 SACM1LQ9NTJ5 587 aa13.39□□□□□ -0.27
PHF3-209ENST00000509330 ZNF593O00488 134 aaPredicted RBP13.39□□□□□ -0.27
PHF3-209ENST00000509330 MT-ATP6P00846 226 aa13.39□□□□□ -0.27
PHF3-209ENST00000509330 APEHP13798 732 aaKnown RBP13.39□□□□□ -0.27
PHF3-209ENST00000509330 ISXQ2M1V0 245 aa13.39□□□□□ -0.27
PHF3-209ENST00000509330 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.39□□□□□ -0.271e-6■■■□□ 16.3
PHF3-209ENST00000509330 SFXN4Q6P4A7 337 aa13.39□□□□□ -0.27
PHF3-209ENST00000509330 CCBE1Q6UXH8 406 aaPredicted RBP13.39□□□□□ -0.27
PHF3-209ENST00000509330 ESPNLQ6ZVH7 1005 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms