RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 B3GAT2Q9NPZ5 323 aa12.88□□□□□ -0.35
UBE2D3-228ENST00000508974 NANSQ9NR45 359 aa12.88□□□□□ -0.35
UBE2D3-228ENST00000508974 MRGBPQ9NV56 204 aa12.88□□□□□ -0.35
UBE2D3-228ENST00000508974 BAG5Q9UL15 447 aa12.88□□□□□ -0.35
UBE2D3-228ENST00000508974 ALPK2Q86TB3 2170 aa12.88□□□□□ -0.35
UBE2D3-228ENST00000508974 IGHV4-30-2A0A087WSY4 118 aa12.87□□□□□ -0.35
UBE2D3-228ENST00000508974 FAM220BPB1ANY3 271 aa12.87□□□□□ -0.35
UBE2D3-228ENST00000508974 NPPAP01160 153 aa12.87□□□□□ -0.35
UBE2D3-228ENST00000508974 HLA-HP01893 362 aa12.87□□□□□ -0.35
UBE2D3-228ENST00000508974 B4GALT1P15291 398 aa12.87□□□□□ -0.35
UBE2D3-228ENST00000508974 CSNK1A1P48729 337 aa12.87□□□□□ -0.35
UBE2D3-228ENST00000508974 PPP2R2BQ00005 443 aa12.87□□□□□ -0.35
UBE2D3-228ENST00000508974 CHRNB3Q05901 458 aa12.87□□□□□ -0.35
UBE2D3-228ENST00000508974 PIGFQ07326 219 aa12.87□□□□□ -0.35
UBE2D3-228ENST00000508974 CYBRD1Q53TN4 286 aa12.87□□□□□ -0.35
UBE2D3-228ENST00000508974 ERICH5Q6P6B1 374 aa12.87□□□□□ -0.35
UBE2D3-228ENST00000508974 ZNF813Q6ZN06 617 aa12.87□□□□□ -0.35
UBE2D3-228ENST00000508974 SLC35D2Q76EJ3 337 aa12.87□□□□□ -0.35
UBE2D3-228ENST00000508974 NANOGNBQ7Z5D8 188 aa12.87□□□□□ -0.35
UBE2D3-228ENST00000508974 PXKQ7Z7A4 578 aa12.87□□□□□ -0.35
UBE2D3-228ENST00000508974 NKAIN4Q8IVV8 208 aa12.87□□□□□ -0.35
UBE2D3-228ENST00000508974 ANKK1Q8NFD2 765 aa12.87□□□□□ -0.35
UBE2D3-228ENST00000508974 OR2T12Q8NG77 320 aa12.87□□□□□ -0.35
UBE2D3-228ENST00000508974 TMEM255BQ8WV15 326 aa12.87□□□□□ -0.35
UBE2D3-228ENST00000508974 KATNB1Q9BVA0 655 aa12.87□□□□□ -0.35
UBE2D3-228ENST00000508974 PCDHAC1Q9H158 963 aa12.87□□□□□ -0.35
UBE2D3-228ENST00000508974 CCDC134Q9H6E4 229 aa12.87□□□□□ -0.35
UBE2D3-228ENST00000508974 MED4Q9NPJ6 270 aa12.87□□□□□ -0.35
UBE2D3-228ENST00000508974 MEPEQ9NQ76 525 aaPredicted RBP12.87□□□□□ -0.35
UBE2D3-228ENST00000508974 CA10Q9NS85 328 aa12.87□□□□□ -0.35
UBE2D3-228ENST00000508974 TAS2R5Q9NYW4 299 aa12.87□□□□□ -0.35
UBE2D3-228ENST00000508974 CRNNQ9UBG3 495 aaPredicted RBP12.87□□□□□ -0.35
UBE2D3-228ENST00000508974 POFUT2Q9Y2G5 429 aa12.87□□□□□ -0.35
UBE2D3-228ENST00000508974 PMF1-BGLAPU3KQ54 211 aa12.87□□□□□ -0.35
UBE2D3-228ENST00000508974 NAV3Q8IVL0 2385 aa12.87□□□□□ -0.35
UBE2D3-228ENST00000508974 ARFGEF3Q5TH69 2177 aa12.87□□□□□ -0.35
UBE2D3-228ENST00000508974 BLOC1S5-TXNDC5H3BN57 136 aa12.86□□□□□ -0.35
UBE2D3-228ENST00000508974 H7C417 338 aa12.86□□□□□ -0.35
UBE2D3-228ENST00000508974 IGLV1-44P01699 117 aa12.86□□□□□ -0.35
UBE2D3-228ENST00000508974 HIST1H2ABP04908 130 aa12.86□□□□□ -0.35
UBE2D3-228ENST00000508974 CBR1P16152 277 aa12.86□□□□□ -0.35
UBE2D3-228ENST00000508974 UGT2B15P54855 530 aa12.86□□□□□ -0.35
UBE2D3-228ENST00000508974 KRTAP1-1Q07627 177 aa12.86□□□□□ -0.35
UBE2D3-228ENST00000508974 PIN1Q13526 163 aaPredicted RBP12.86□□□□□ -0.35
UBE2D3-228ENST00000508974 C1QTNF12Q5T7M4 302 aa12.86□□□□□ -0.35
UBE2D3-228ENST00000508974 CLEC2AQ6UVW9 174 aa12.86□□□□□ -0.35
UBE2D3-228ENST00000508974 NHLRC1Q6VVB1 395 aa12.86□□□□□ -0.35
UBE2D3-228ENST00000508974 DNM1P46Q6ZS02 220 aa12.86□□□□□ -0.35
UBE2D3-228ENST00000508974 HIST3H2AQ7L7L0 130 aa12.86□□□□□ -0.35
UBE2D3-228ENST00000508974 SLC46A3Q7Z3Q1 461 aa12.86□□□□□ -0.35
UBE2D3-228ENST00000508974 MICU2Q8IYU8 434 aa12.86□□□□□ -0.35
UBE2D3-228ENST00000508974 HIST1H2ACQ93077 130 aa12.86□□□□□ -0.35
UBE2D3-228ENST00000508974 MPP4Q96JB8 637 aa12.86□□□□□ -0.35
UBE2D3-228ENST00000508974 ZNF317Q96PQ6 595 aaPredicted RBP12.86□□□□□ -0.35
UBE2D3-228ENST00000508974 RHNO1Q9BSD3 238 aa12.86□□□□□ -0.35
UBE2D3-228ENST00000508974 NOX3Q9HBY0 568 aa12.86□□□□□ -0.35
UBE2D3-228ENST00000508974 RIMS3Q9UJD0 308 aa12.86□□□□□ -0.35
UBE2D3-228ENST00000508974 CSPG4Q6UVK1 2322 aa12.86□□□□□ -0.35
UBE2D3-228ENST00000508974 ELOVL7A1L3X0 281 aa12.85□□□□□ -0.35
UBE2D3-228ENST00000508974 PIP5K1CO60331 668 aa12.85□□□□□ -0.35
UBE2D3-228ENST00000508974 IFNA14P01570 189 aa12.85□□□□□ -0.35
UBE2D3-228ENST00000508974 IGKV3-15P01624 115 aa12.85□□□□□ -0.35
UBE2D3-228ENST00000508974 F13BP05160 661 aa12.85□□□□□ -0.35
UBE2D3-228ENST00000508974 OR4A8P0C604 315 aa12.85□□□□□ -0.35
UBE2D3-228ENST00000508974 BMP4P12644 408 aa12.85□□□□□ -0.35
UBE2D3-228ENST00000508974 COX4I1P13073 169 aa12.85□□□□□ -0.35
UBE2D3-228ENST00000508974 KDELR2P33947 212 aa12.85□□□□□ -0.35
UBE2D3-228ENST00000508974 SNRPD2P62316 118 aaKnown RBP12.85□□□□□ -0.35
UBE2D3-228ENST00000508974 ADIPOQQ15848 244 aa12.85□□□□□ -0.35
UBE2D3-228ENST00000508974 MST1LQ2TV78 715 aa12.85□□□□□ -0.35
UBE2D3-228ENST00000508974 KRT80Q6KB66 452 aa12.85□□□□□ -0.35
UBE2D3-228ENST00000508974 ANKS4BQ8N8V4 417 aa12.85□□□□□ -0.35
UBE2D3-228ENST00000508974 LRR1Q96L50 414 aa12.85□□□□□ -0.35
UBE2D3-228ENST00000508974 FOXB1Q99853 325 aa12.85□□□□□ -0.35
UBE2D3-228ENST00000508974 VRK1Q99986 396 aaPredicted RBP12.85□□□□□ -0.35
UBE2D3-228ENST00000508974 ZNF426Q9BUY5 554 aa12.85□□□□□ -0.35
UBE2D3-228ENST00000508974 FAM107BQ9H098 131 aa12.85□□□□□ -0.35
UBE2D3-228ENST00000508974 C20orf141Q9NUB4 165 aa12.85□□□□□ -0.35
UBE2D3-228ENST00000508974 CMTM6Q9NX76 183 aa12.85□□□□□ -0.35
UBE2D3-228ENST00000508974 ZNF229Q9UJW7 825 aa12.85□□□□□ -0.35
UBE2D3-228ENST00000508974 IGHV2OR16-5A0A0B4J2B6 119 aa12.84□□□□□ -0.35
UBE2D3-228ENST00000508974 GPRIN2O60269 458 aa12.84□□□□□ -0.35
UBE2D3-228ENST00000508974 OR5F1O95221 314 aa12.84□□□□□ -0.35
UBE2D3-228ENST00000508974 MT-ND1P03886 318 aa12.84□□□□□ -0.35
UBE2D3-228ENST00000508974 TP53P04637 393 aaPredicted RBP12.84□□□□□ -0.35
UBE2D3-228ENST00000508974 ASAH2BP0C7U1 165 aa12.84□□□□□ -0.35
UBE2D3-228ENST00000508974 PATE4P0C8F1 98 aa12.84□□□□□ -0.35
UBE2D3-228ENST00000508974 FUT1P19526 365 aa12.84□□□□□ -0.35
UBE2D3-228ENST00000508974 THBS4P35443 961 aa12.84□□□□□ -0.35
UBE2D3-228ENST00000508974 ARR3P36575 388 aa12.84□□□□□ -0.35
UBE2D3-228ENST00000508974 SERPINF1P36955 418 aa12.84□□□□□ -0.35
UBE2D3-228ENST00000508974 YAP1P46937 504 aaKnown RBP12.84□□□□□ -0.35
UBE2D3-228ENST00000508974 PTDSS1P48651 473 aaKnown RBP12.84□□□□□ -0.35
UBE2D3-228ENST00000508974 MYBPC1Q00872 1141 aa12.84□□□□□ -0.35
UBE2D3-228ENST00000508974 HGFACQ04756 655 aa12.84□□□□□ -0.35
UBE2D3-228ENST00000508974 LIPEQ05469 1076 aa12.84□□□□□ -0.35
UBE2D3-228ENST00000508974 CARTPTQ16568 116 aa12.84□□□□□ -0.35
UBE2D3-228ENST00000508974 SWI5Q1ZZU3 235 aa12.84□□□□□ -0.35
UBE2D3-228ENST00000508974 GSG1Q2KHT4 349 aa12.84□□□□□ -0.35
UBE2D3-228ENST00000508974 RP9Q8TA86 221 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms