RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 TRBV2A0A0J9YWF9 115 aa10.02□□□□□ -0.8
SH3RF1-203ENST00000508685 A0A1W2PRG6 482 aa10.02□□□□□ -0.8
SH3RF1-203ENST00000508685 CDC14CA4D256 554 aa10.02□□□□□ -0.8
SH3RF1-203ENST00000508685 TUBAL3A6NHL2 446 aa10.02□□□□□ -0.8
SH3RF1-203ENST00000508685 EFCAB7A8K855 629 aa10.02□□□□□ -0.8
SH3RF1-203ENST00000508685 SMLR1H3BR10 107 aa10.02□□□□□ -0.8
SH3RF1-203ENST00000508685 GNB5O14775 395 aa10.02□□□□□ -0.8
SH3RF1-203ENST00000508685 TGM6O95932 706 aa10.02□□□□□ -0.8
SH3RF1-203ENST00000508685 IGF2P01344 180 aa10.02□□□□□ -0.8
SH3RF1-203ENST00000508685 CD3GP09693 182 aa10.02□□□□□ -0.8
SH3RF1-203ENST00000508685 PNLIPP16233 465 aa10.02□□□□□ -0.8
SH3RF1-203ENST00000508685 SRP9P49458 86 aaKnown RBP10.02□□□□□ -0.8
SH3RF1-203ENST00000508685 ELAVL1Q15717 326 aaKnown RBP10.02□□□□□ -0.8
SH3RF1-203ENST00000508685 SLC6A19Q695T7 634 aa10.02□□□□□ -0.8
SH3RF1-203ENST00000508685 PRR22Q8IZ63 422 aa10.02□□□□□ -0.8
SH3RF1-203ENST00000508685 ELMOD2Q8IZ81 293 aa10.02□□□□□ -0.8
SH3RF1-203ENST00000508685 FAM71CQ8NEG0 241 aa10.02□□□□□ -0.8
SH3RF1-203ENST00000508685 ZNF680Q8NEM1 530 aa10.02□□□□□ -0.8
SH3RF1-203ENST00000508685 SUN5Q8TC36 379 aa10.02□□□□□ -0.8
SH3RF1-203ENST00000508685 ZNF721Q8TF20 911 aa10.02□□□□□ -0.8
SH3RF1-203ENST00000508685 OIT3Q8WWZ8 545 aa10.02□□□□□ -0.8
SH3RF1-203ENST00000508685 PELI1Q96FA3 418 aa10.02□□□□□ -0.8
SH3RF1-203ENST00000508685 OR6C1Q96RD1 312 aa10.02□□□□□ -0.8
SH3RF1-203ENST00000508685 SLC19A3Q9BZV2 496 aa10.02□□□□□ -0.8
SH3RF1-203ENST00000508685 SLC22A11Q9NSA0 550 aa10.02□□□□□ -0.8
SH3RF1-203ENST00000508685 NPTNQ9Y639 398 aa10.02□□□□□ -0.8
SH3RF1-203ENST00000508685 IGHV5-10-1A0A0J9YXX1 117 aa10.02□□□□□ -0.81
SH3RF1-203ENST00000508685 LEUTXA8MZ59 168 aa10.02□□□□□ -0.81
SH3RF1-203ENST00000508685 GABARAPH6UMI1 98 aa10.02□□□□□ -0.81
SH3RF1-203ENST00000508685 GPR171O14626 319 aa10.02□□□□□ -0.81
SH3RF1-203ENST00000508685 PEX14O75381 377 aa10.02□□□□□ -0.81
SH3RF1-203ENST00000508685 CSTAP01040 98 aa10.02□□□□□ -0.81
SH3RF1-203ENST00000508685 TACSTD2P09758 323 aa10.02□□□□□ -0.81
SH3RF1-203ENST00000508685 RAB40ALP0C0E4 278 aa10.02□□□□□ -0.81
SH3RF1-203ENST00000508685 SRMP19623 302 aa10.02□□□□□ -0.81
SH3RF1-203ENST00000508685 CCR9P51686 369 aa10.02□□□□□ -0.81
SH3RF1-203ENST00000508685 PRPS1P60891 318 aa10.02□□□□□ -0.81
SH3RF1-203ENST00000508685 CD226Q15762 336 aa10.02□□□□□ -0.81
SH3RF1-203ENST00000508685 LPAL2Q16609 132 aa10.02□□□□□ -0.81
SH3RF1-203ENST00000508685 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.02□□□□□ -0.81
SH3RF1-203ENST00000508685 KIRREL2Q6UWL6 708 aa10.02□□□□□ -0.81
SH3RF1-203ENST00000508685 COX15Q7KZN9 410 aa10.02□□□□□ -0.81
SH3RF1-203ENST00000508685 C9orf40Q8IXQ3 194 aa10.02□□□□□ -0.81
SH3RF1-203ENST00000508685 ZNF440Q8IYI8 595 aa10.02□□□□□ -0.81
SH3RF1-203ENST00000508685 CYB561A3Q8NBI2 242 aa10.02□□□□□ -0.81
SH3RF1-203ENST00000508685 RAB40AQ8WXH6 277 aa10.02□□□□□ -0.81
SH3RF1-203ENST00000508685 HSD17B8Q92506 261 aa10.02□□□□□ -0.81
SH3RF1-203ENST00000508685 NXPE2Q96DL1 559 aa10.02□□□□□ -0.81
SH3RF1-203ENST00000508685 SLC7A5P2Q9GIP4 190 aa10.02□□□□□ -0.81
SH3RF1-203ENST00000508685 NANSQ9NR45 359 aa10.02□□□□□ -0.81
SH3RF1-203ENST00000508685 FAM86C1Q9NVL1 165 aa10.02□□□□□ -0.81
SH3RF1-203ENST00000508685 SLCO1C1Q9NYB5 712 aa10.02□□□□□ -0.81
SH3RF1-203ENST00000508685 MRPS7Q9Y2R9 242 aaKnown RBP10.02□□□□□ -0.81
SH3RF1-203ENST00000508685 ZNF281Q9Y2X9 895 aa10.02□□□□□ -0.81
SH3RF1-203ENST00000508685 PCDHGA9Q9Y5G4 932 aaKnown RBP10.02□□□□□ -0.81
SH3RF1-203ENST00000508685 CELSR3Q9NYQ7 3312 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 NUP210LQ5VU65 1888 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 SERINC4A6NH21 518 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 AIPO00170 330 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 KHNYNO15037 678 aaKnown RBP10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 TOX3O15405 576 aaPredicted RBP10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 SSNA1O43805 119 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 GDF9O60383 454 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 LDOC1O95751 146 aaPredicted RBP10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 CALCBP10092 127 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 CLUP10909 449 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 SNRPBP14678 240 aaKnown RBP10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 DNASE1P24855 282 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 EDNRAP25101 427 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 MAPK3P27361 379 aaPredicted RBP10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 RORAP35398 523 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 MNDAP41218 407 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 SCAND1P57086 179 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 DGCR2P98153 550 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 CRYZQ08257 329 aaKnown RBP10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 BIKQ13323 160 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 CAMK2DQ13557 499 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 FHL1Q13642 323 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 TP53I3Q53FA7 332 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 METTL11BQ5VVY1 283 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 SIGIRRQ6IA17 410 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 RHBDD2Q6NTF9 364 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 PWWP2BQ6NUJ5 590 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 APOOLQ6UXV4 268 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 RPTNQ6XPR3 784 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 OR6V1Q8N148 313 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 RPS4Y2Q8TD47 263 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 FAM122AQ96E09 287 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 S100A16Q96FQ6 103 aaKnown RBP10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 CCDC74BQ96LY2 380 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 SLC46A1Q96NT5 459 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 NUDT9Q9BW91 350 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 SLITRK2Q9H156 845 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 SMOC1Q9H4F8 434 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 KLHL9Q9P2J3 617 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 NCDNQ9UBB6 729 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 ZNF337Q9Y3M9 751 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 HEATR5AQ86XA9 2040 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 GPR179Q6PRD1 2367 aa10.01□□□□□ -0.81
SH3RF1-203ENST00000508685 IGHV3-20A0A0C4DH32 117 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms